DK953388
Clone id TST39A01NGRL0017_K06
Library
Length 269
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_K06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CAGGACGAAAAGAGAGGGGCTTGTTGCATGAAGGGGATCAGAGTGAGAGCATGAGAGTGT
CTGCGCTTTGAACAGATGGAGGATGATAGATGGTCTGTTTACGAAACATGTAGGAAAACC
TCATGCCGTACCTCGCCCCCATGGAATTTGTTGCGAGGCATGGGCAAGCTTCTTTGGTTT
CTATTATCCTGTTTGTATTTCATTTCTCTTTCAGATTGAAATTTATGTGAAAAGGCTATT
GCAACAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953388|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_K06, 5'
(242 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A8XD22
Definition tr|A8XD22|A8XD22_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae
Align length 30
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953388|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_K06, 5'
(242 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8XD22|A8XD22_CAEBR Putative uncharacterized protein OS=Caeno... 33 7.0

>tr|A8XD22|A8XD22_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG11422 PE=4 SV=2
Length = 555

Score = 33.1 bits (74), Expect = 7.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2

Query: 71 NRWRMIDGLFTKHVGKPHAVPRPHGICCEA 160
++WR + LF KH+ +PRP CCE+
Sbjct: 231 HKWRFDENLFCKHIADIIKIPRPPKQCCES 260