DK953363 |
Clone id |
TST39A01NGRL0017_J05 |
Library |
TST39 |
Length |
562 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_J05. 5' end sequence. |
Accession |
DK953363 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTGTTCTTGTGTGCTCTCTCTGTGTGTTCGTACGAGAGAGCGAGAAACCATGGGTCTCAC CTTCACCAAGCTCTTCCAGCGATTGTTCGCCAAGAAGGAGATGCGCATCTTGATGGTTGG TCTCGATGCTGCTGGAAAAACCACCATTCTCTACAAGCTCAAGCTTGGCGAGATCGTGAC TACCATTCCAACCATAGGGTTTAATGTTGAAACTGTGGAGTACAAGAACATCAGCTTCAC AGTGTGGGATGTTGGAGGCCAAGATAAGATTCGCCCTCTTTGGAGGCACTACTTCCAGAA TACCCAAGGCCTGATCTTTGTCGTGGACAGTAATGACAGGGATCGTGTGGTGGAAGCTCG CGATGAACTTCATAGAATGCTTAATGAGGATGAGCTACGGGATGCTGTGCTTCTTGTCTT CGCAAACAAGCAGGATCTTCCCAATGCTATGAATGCAGCTGAGATCACAGACAAATTGGG CCTACACTCTCTTCGTCAACGCCACTGGTATATTCAGAGTACATGTGCCACATCAGGCGA AGGTCTTTACGAGGGCTTGGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P51823 |
Definition |
sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica |
Align length |
171 |
Score (bit) |
342.0 |
E-value |
6.0e-94 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPC8 |
Definition |
tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
171 |
Score (bit) |
346.0 |
E-value |
6.0e-94 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953363|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_J05, 5' (562 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea... 346 6e-94 tr|Q6S4R7|Q6S4R7_MEDSA ADP-ribosylation factor OS=Medicago sativ... 344 2e-93 tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hya... 344 2e-93 tr|Q5QQ33|Q5QQ33_MEDTR ADP-ribosylation factor 1 OS=Medicago tru... 344 2e-93 tr|B7FL30|B7FL30_MEDTR Putative uncharacterized protein OS=Medic... 344 2e-93 tr|Q7XZG0|Q7XZG0_ORYSJ Os03g0811900 protein OS=Oryza sativa subs... 343 5e-93 tr|B4FFK3|B4FFK3_MAIZE Putative uncharacterized protein OS=Zea m... 343 5e-93 tr|A2XN99|A2XN99_ORYSI Putative uncharacterized protein OS=Oryza... 343 5e-93 tr|Q76ME3|Q76ME3_WHEAT ADP-ribosylation factor OS=Triticum aesti... 342 6e-93 tr|Q70XK1|Q70XK1_HORVD ADP-ribosylation factor 1-like protein OS... 342 6e-93 tr|Q38JU3|Q38JU3_DAUCA ADP ribosylation factor 002 OS=Daucus car... 342 6e-93 tr|Q0JIB5|Q0JIB5_ORYSJ cDNA clone:001-047-G02, full insert seque... 342 6e-93 tr|Q0DH67|Q0DH67_ORYSJ Os05g0489600 protein OS=Oryza sativa subs... 342 6e-93 tr|B8AB93|B8AB93_ORYSI Putative uncharacterized protein OS=Oryza... 342 6e-93 tr|B7FIW2|B7FIW2_MEDTR Putative uncharacterized protein OS=Medic... 342 6e-93 tr|B7FI12|B7FI12_MEDTR Putative uncharacterized protein OS=Medic... 342 6e-93 tr|B3TLZ8|B3TLZ8_ELAGV ADP-ribosylation factor OS=Elaeis guineen... 342 6e-93 tr|A9TBY9|A9TBY9_PHYPA Arf1_5/ArfA-family small GTPase OS=Physco... 342 6e-93 tr|A9SED7|A9SED7_PHYPA Predicted protein OS=Physcomitrella paten... 342 6e-93 tr|A9P9X4|A9P9X4_POPTR Putative uncharacterized protein OS=Popul... 342 6e-93 tr|A9P9U3|A9P9U3_POPTR Putative uncharacterized protein OS=Popul... 342 6e-93 tr|A7QNZ2|A7QNZ2_VITVI Chromosome chr1 scaffold_135, whole genom... 342 6e-93 tr|A7Q0T1|A7Q0T1_VITVI Chromosome chr7 scaffold_42, whole genome... 342 6e-93 tr|A7PRL9|A7PRL9_VITVI Chromosome chr14 scaffold_27, whole genom... 342 6e-93 tr|A2Y5Z6|A2Y5Z6_ORYSI Putative uncharacterized protein OS=Oryza... 342 6e-93 tr|Q9LYJ3|Q9LYJ3_ARATH ADP-ribosylation factor-like protein OS=A... 342 8e-93 tr|Q5XUV1|Q5XUV1_WHEAT ADP-ribosylation factor OS=Triticum aesti... 342 8e-93 tr|Q3HVM8|Q3HVM8_SOLTU Putative uncharacterized protein OS=Solan... 342 8e-93 tr|B3TLM7|B3TLM7_ELAGV ADP ribosylation factor 002 OS=Elaeis gui... 342 8e-93 tr|Q9LDC9|Q9LDC9_ORYSJ cDNA clone:J013098K24, full insert sequen... 342 1e-92
>tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 181
Score = 346 bits (887), Expect = 6e-94 Identities = 171/171 (100%), Positives = 171/171 (100%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 171
>tr|Q6S4R7|Q6S4R7_MEDSA ADP-ribosylation factor OS=Medicago sativa GN=ARF1 PE=2 SV=1 Length = 181
Score = 344 bits (882), Expect = 2e-93 Identities = 170/171 (99%), Positives = 170/171 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 171
>tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hyacinthus orientalis GN=ARF PE=2 SV=1 Length = 199
Score = 344 bits (882), Expect = 2e-93 Identities = 171/182 (93%), Positives = 174/182 (95%) Frame = +2
Query: 17 SLCVRTRERETMGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 196 SL ++ MGL+FTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI Sbjct: 8 SLSLKPLSHVEMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 67
Query: 197 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 376 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR Sbjct: 68 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 127
Query: 377 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 556 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG Sbjct: 128 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 187
Query: 557 LD 562 LD Sbjct: 188 LD 189
>tr|Q5QQ33|Q5QQ33_MEDTR ADP-ribosylation factor 1 OS=Medicago truncatula GN=arf1 PE=2 SV=1 Length = 181
Score = 344 bits (882), Expect = 2e-93 Identities = 170/171 (99%), Positives = 170/171 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 171
>tr|B7FL30|B7FL30_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 181
Score = 344 bits (882), Expect = 2e-93 Identities = 170/171 (99%), Positives = 170/171 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 171
>tr|Q7XZG0|Q7XZG0_ORYSJ Os03g0811900 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0033J23.16 PE=3 SV=1 Length = 181
Score = 343 bits (879), Expect = 5e-93 Identities = 169/171 (98%), Positives = 170/171 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+GEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLD 171
>tr|B4FFK3|B4FFK3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 181
Score = 343 bits (879), Expect = 5e-93 Identities = 169/171 (98%), Positives = 170/171 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+GEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLD 171
>tr|A2XN99|A2XN99_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14032 PE=4 SV=1 Length = 354
Score = 343 bits (879), Expect = 5e-93 Identities = 169/171 (98%), Positives = 170/171 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+GEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLD 171
>tr|Q76ME3|Q76ME3_WHEAT ADP-ribosylation factor OS=Triticum aestivum GN=arf PE=2 SV=1 Length = 181
Score = 342 bits (878), Expect = 6e-93 Identities = 169/171 (98%), Positives = 170/171 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 171
>tr|Q70XK1|Q70XK1_HORVD ADP-ribosylation factor 1-like protein OS=Hordeum vulgare var. distichum GN=arf1 PE=2 SV=1 Length = 181
Score = 342 bits (878), Expect = 6e-93 Identities = 169/171 (98%), Positives = 170/171 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 562 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 171
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