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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953355
Clone id TST39A01NGRL0017_I21
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_I21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGAGAGAGAGAGAGACGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATATCAGTAGGTAG
CAAGTAAGCAAGCACAAGCAGACTGTGCCGAACGTGATGGAGAAGATAGGCGAGATGCTG
CACATGGGGGGTCATCGCAAAGAAGAAGAGCACCCAGCTCACCCACCACCGCAATATGCA
GGAGACTATGATCCTGGCCATCACGGTGGTGGTGGCGAGCATCATGGTGGGGTGCCCCCC
CATGTGGCCGCGGCCTCCTATGATCAGCATGAGCACCCGGGACAGATGCATGCAGGACCA
CCCCCTGTTCATGCAGGTTACGGTGGGCTGGAGCAGCAGCAGCACCACCATGGTGGGGCT
CCACCTGCCCATGCCCATGAGCCGCCCCCACCCCACCATGAAGGCCCCATTGAGAAGATG
AAACACAAGATGAAGGGTGGCGA
■■Homology search results ■■ -
sp_hit_id Q9XJ56
Definition sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota
Align length 32
Score (bit) 31.6
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953355|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_I21, 5'
         (443 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota GN=...    32   1.5  
sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus mu...    31   2.0  
sp|Q8BQ33|CO042_MOUSE Uncharacterized protein C15orf42 homolog O...    31   2.6  
sp|Q3T130|TM45B_BOVIN Transmembrane protein 45B OS=Bos taurus GN...    30   5.9  
sp|Q0V6H6|SRB8_PHANO Mediator of RNA polymerase II transcription...    29   10.0 
sp|Q9P227|RHG23_HUMAN Rho GTPase-activating protein 23 OS=Homo s...    29   10.0 
sp|O86164|PMP11_CHLPN Probable outer membrane protein pmp11 OS=C...    29   10.0 

>sp|Q9XJ56|ECP44_DAUCA Phosphoprotein ECPP44 OS=Daucus carota
           GN=ECPP44 PE=1 SV=1
          Length = 258

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/32 (53%), Positives = 18/32 (56%)
 Frame = +1

Query: 97  MEKIGEMLHMGGHRKEEEHPAHPPPQYAGDYD 192
           MEKI E L  GG + EEE  A PPP  A   D
Sbjct: 142 MEKIKEKLPGGGKKVEEETVAPPPPPAAAPVD 173


>sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus
           musculus GN=Arhgap23 PE=2 SV=2
          Length = 1483

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 212 VASIMVGCPPM-WPRPPMISMSTRDRCMQDHPL 307
           VA  +VG PP   PRPP + +  RD C    PL
Sbjct: 4   VAFCLVGIPPRPEPRPPQLPLGPRDGCSSGRPL 36


>sp|Q8BQ33|CO042_MOUSE Uncharacterized protein C15orf42 homolog OS=Mus
            musculus PE=2 SV=2
          Length = 1889

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 84   CAERDGEDRRDAAHGGSSQRRRAPSSPTT 170
            C   DG+ R+DAA  GS +   A SSP T
Sbjct: 1515 CCTADGKQRQDAAQQGSPRASEATSSPQT 1543


>sp|Q3T130|TM45B_BOVIN Transmembrane protein 45B OS=Bos taurus
           GN=TMEM45B PE=2 SV=1
          Length = 276

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
 Frame = +2

Query: 140 KKKSTQLTHHRNMQETMILAITVVVASIMVGCPPMWPRPPMISMSTRDRCM-----QDHP 304
           K+KS QLTHH    E +  AI  + A I +      P  P + +   D  +     Q   
Sbjct: 33  KEKSNQLTHHYQRLEIIEAAIRTLFAVIGILVEQFVPDGPHLHLYHEDHWVKLMNWQHST 92

Query: 305 LFMQVTVGWSSSSTTMVGLHLPMPMSR 385
           +++   V       T +  H+P+ + R
Sbjct: 93  MYLFFAVSGIMDMLTYLITHVPLGLDR 119


>sp|Q0V6H6|SRB8_PHANO Mediator of RNA polymerase II transcription
           subunit 12 OS=Phaeosphaeria nodorum GN=SRB8 PE=3 SV=1
          Length = 1547

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +3

Query: 63  SKQAQA---DCAERDGEDRRDAAHGGSSQRRRAP 155
           SK A A   DC +   ED R AAH G+S+ R  P
Sbjct: 24  SKPANALPPDCIDPTLEDERPAAHNGASEARPPP 57


>sp|Q9P227|RHG23_HUMAN Rho GTPase-activating protein 23 OS=Homo
           sapiens GN=ARHGAP23 PE=1 SV=2
          Length = 1491

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 212 VASIMVGCPPM-WPRPPMISMSTRDRCMQDHP 304
           VA  +VG PP   PRPP + +  RD C    P
Sbjct: 4   VAFCLVGIPPRPEPRPPQLPLGPRDGCSPRRP 35


>sp|O86164|PMP11_CHLPN Probable outer membrane protein pmp11
           OS=Chlamydia pneumoniae GN=pmp11 PE=2 SV=1
          Length = 928

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 263 ISMSTRDRCMQDHPLFMQVTVG-WSSSSTTM-VGLHLPMPMSRPHPTMK 403
           +S S  D  M+ H   +  + G WS+      +GL LP  +S PHP  K
Sbjct: 744 VSFSHSDNRMETHYTSLPESEGSWSNECIAGGIGLDLPFVLSNPHPLFK 792
tr_hit_id Q941N0
Definition tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
Align length 31
Score (bit) 41.2
E-value 0.026
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953355|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_I21, 5'
         (443 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam ...    41   0.026
tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max P...    38   0.22 
tr|Q6PNN7|Q6PNN7_9FABA Cold-induced protein OS=Ammopiptanthus mo...    37   0.63 
tr|Q93XL8|Q93XL8_CITPA Dehydrin COR15 OS=Citrus paradisi PE=2 SV=1     34   3.1  
tr|Q8W267|Q8W267_CARPA Maturation-associated SRC1-like protein O...    34   3.1  
tr|Q6VTH3|Q6VTH3_9ROSI COR15 OS=Citrus clementina x Citrus retic...    34   4.1  
tr|B8LFE2|B8LFE2_SOYBN Low temperature inducible SLTI66 OS=Glyci...    34   4.1  
tr|Q9SLJ2|Q9SLJ2_ARATH F20D21.23 protein (Putative uncharacteriz...    33   5.4  
tr|Q8LG75|Q8LG75_ARATH Water stress-induced protein, putative OS...    33   5.4  
tr|Q8H7A6|Q8H7A6_ARATH Putative uncharacterized protein OS=Arabi...    33   5.4  
tr|Q9VYV7|Q9VYV7_DROME Phosphorylase kinase gamma OS=Drosophila ...    33   5.4  
tr|Q9I7D0|Q9I7D0_DROME Phosphorylase kinase gamma, isoform A OS=...    33   5.4  
tr|Q961E7|Q961E7_DROME Phosphorylase kinase gamma, isoform B OS=...    33   5.4  
tr|Q7K4Y9|Q7K4Y9_DROME GH22314p OS=Drosophila melanogaster GN=Ph...    33   5.4  
tr|Q29JA5|Q29JA5_DROPS GA14880 OS=Drosophila pseudoobscura pseud...    33   5.4  
tr|B4R361|B4R361_DROSI GD17041 OS=Drosophila simulans GN=GD17041...    33   5.4  
tr|B4Q1S3|B4Q1S3_DROYA GE15660 OS=Drosophila yakuba GN=GE15660 P...    33   5.4  
tr|B4MT15|B4MT15_DROWI GK20076 OS=Drosophila willistoni GN=GK200...    33   5.4  
tr|B4MAI4|B4MAI4_DROVI GJ15921 OS=Drosophila virilis GN=GJ15921 ...    33   5.4  
tr|B4L681|B4L681_DROMO GI16230 OS=Drosophila mojavensis GN=GI162...    33   5.4  
tr|B4JM18|B4JM18_DROGR GH24413 OS=Drosophila grimshawi GN=GH2441...    33   5.4  
tr|B4IK49|B4IK49_DROSE GM13103 OS=Drosophila sechellia GN=GM1310...    33   5.4  
tr|B4H3T7|B4H3T7_DROPE GL15144 OS=Drosophila persimilis GN=GL151...    33   5.4  
tr|B3NUA3|B3NUA3_DROER GG18438 OS=Drosophila erecta GN=GG18438 P...    33   5.4  
tr|B3MSC4|B3MSC4_DROAN GF20823 OS=Drosophila ananassae GN=GF2082...    33   5.4  
tr|Q47KJ5|Q47KJ5_THEFY Putative transport protein OS=Thermobifid...    33   7.0  
tr|Q9SPB5|Q9SPB5_MEDSA Cold acclimation responsive protein CAR2 ...    33   7.0  
tr|Q8RW12|Q8RW12_RICCO Iron transport protein 2 OS=Ricinus commu...    33   7.0  
tr|Q7Y1A0|Q7Y1A0_SOLSG 25 kDa protein dehydrin OS=Solanum sogara...    33   7.0  
tr|Q68YT2|Q68YT2_VACCO Dehydrin COR11 OS=Vaccinium corymbosum GN...    33   7.0  

>tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam
           GN=DIP PE=4 SV=1
          Length = 113

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 94  VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGD 186
           ++ KIGE LH+GGH+KEEEH      +Y G+
Sbjct: 4   IINKIGETLHVGGHKKEEEHKGEVHGEYKGE 34


>tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max PE=4
           SV=1
          Length = 113

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +1

Query: 94  VMEKIGEMLHMGGHRKEEEHPA-HPPPQYAGDY 189
           ++ KIG  LH+GGH+KEEEH   H   +Y G++
Sbjct: 4   IIHKIGGTLHVGGHKKEEEHKGEHHAGEYKGEH 36


>tr|Q6PNN7|Q6PNN7_9FABA Cold-induced protein OS=Ammopiptanthus
           mongolicus GN=Cip PE=2 SV=1
          Length = 154

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 94  VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGD 186
           ++ KIGE LH+GG++KE+EH       Y G+
Sbjct: 4   IINKIGETLHVGGNKKEDEHKVEGHGDYKGE 34


>tr|Q93XL8|Q93XL8_CITPA Dehydrin COR15 OS=Citrus paradisi PE=2 SV=1
          Length = 137

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +1

Query: 94  VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 189
           V+ KIGE LHMGG +KEE+   H    ++GD+
Sbjct: 4   VIHKIGEALHMGGGQKEED--KHKAEHHSGDH 33


>tr|Q8W267|Q8W267_CARPA Maturation-associated SRC1-like protein
           OS=Carica papaya GN=SRC PE=4 SV=1
          Length = 93

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 94  VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 189
           +M KI + LH+GG +KEEEH      ++ G++
Sbjct: 4   IMHKIEDALHIGGRKKEEEHKGEHHGEHKGEH 35


>tr|Q6VTH3|Q6VTH3_9ROSI COR15 OS=Citrus clementina x Citrus
           reticulata PE=2 SV=1
          Length = 138

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +1

Query: 94  VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 189
           V+ KIGE LHMGG +KEE+   H    ++GD+
Sbjct: 4   VIHKIGEALHMGGGQKEED--KHKGEHHSGDH 33


>tr|B8LFE2|B8LFE2_SOYBN Low temperature inducible SLTI66 OS=Glycine
           max PE=4 SV=1
          Length = 90

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +1

Query: 94  VMEKIGEMLHMGGHRKEEEHPAHPPPQYAGDY 189
           ++ KI E LH+GGH+K EEH   P  ++ G++
Sbjct: 4   IIHKIEETLHVGGHKK-EEHKGEPHGEHKGEH 34


>tr|Q9SLJ2|Q9SLJ2_ARATH F20D21.23 protein (Putative uncharacterized
           protein At1g54410) (At1g54410/F20D21_23) (At1g54410)
           OS=Arabidopsis thaliana GN=At1g54410/F20D21_23 PE=4 SV=1
          Length = 98

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
 Frame = +1

Query: 94  VMEKIGEMLHMGG------HRKEEEHPAHPPPQYAGDY 189
           ++ KIG+ LH+GG      H+KEEEH  H     +G++
Sbjct: 4   LINKIGDALHIGGGNKEGEHKKEEEHKKHVDEHKSGEH 41


>tr|Q8LG75|Q8LG75_ARATH Water stress-induced protein, putative
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 98

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
 Frame = +1

Query: 94  VMEKIGEMLHMGG------HRKEEEHPAHPPPQYAGDY 189
           ++ KIG+ LH+GG      H+KEEEH  H     +G++
Sbjct: 4   LINKIGDALHIGGGNKEGEHKKEEEHKKHVDEHKSGEH 41


>tr|Q8H7A6|Q8H7A6_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 98

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
 Frame = +1

Query: 94  VMEKIGEMLHMGG------HRKEEEHPAHPPPQYAGDY 189
           ++ KIG+ LH+GG      H+KEEEH  H     +G++
Sbjct: 4   LINKIGDALHIGGGNKEGEHKKEEEHKKHVDEHKSGEH 41