DK953352 |
Clone id |
TST39A01NGRL0017_I18 |
Library |
TST39 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_I18. 5' end sequence. |
Accession |
DK953352 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL354Contig1 |
Sequence |
GTCAGCGATGGTCAAACAATGCATGCAGTACATTGATGAAACTCCAGATTTAGAAACACG TATCGAGCTGATCAAAACGCTGAATACTGTCTCAGCAGGCAAGATTTATGTGGAGTTGGA GAGAGCAAGATTGGTGAGACGGCTTACTAAAATAAAAGAAGATCAGGGTTTGATTGCAGA GGCAGCAGATTTAATGCAAGAAATTGCTGTTGAGACTTTTGGAGCTATGGCAAAAACAGA AAAGATTGCATTCATCTTGGAGCAAGTCCGTTTGTGTCTGGACCGCAATGACTACATGCG TGCTCAAATACTCGCTCGCAAAATAAGTCCAAGGGTATTTGTAGCTGATACCGGCAAAGA GAAAAAGAAGCCGAAAGAAGGGGAGGCTATTATTGAGGAAGCTCCACCAGAAATTCCATC TCTTCTTGAATTAAAGCGCATTTACTATGAACTAATGATCAGATACTACTCGCATAACAA TGATTATTTGGAAATTTGTCGAAGTTTTCAAGCCATTTATGATACCCCAACTGTAAAGGA GGATACATCTCAGAGCATACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54UJ0 |
Definition |
sp|Q54UJ0|PSD12_DICDI 26S proteasome non-ATPase regulatory subunit 12 OS=Dictyostelium discoideum |
Align length |
183 |
Score (bit) |
137.0 |
E-value |
3.0e-32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3TM04 |
Definition |
tr|B3TM04|B3TM04_ELAGV 26S proteasome subunit RPN5b OS=Elaeis guineensis var. tenera |
Align length |
186 |
Score (bit) |
245.0 |
E-value |
1.0e-63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953352|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_I18, 5' (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3TM04|B3TM04_ELAGV 26S proteasome subunit RPN5b OS=Elaeis gu... 245 1e-63 tr|B7FLC5|B7FLC5_MEDTR Putative uncharacterized protein OS=Medic... 239 6e-62 tr|A9PH46|A9PH46_POPTR Putative uncharacterized protein OS=Popul... 238 2e-61 tr|Q9FIB6|Q9FIB6_ARATH 26S proteasome p55 protein-like (26S prot... 237 3e-61 tr|Q3E9J1|Q3E9J1_ARATH Uncharacterized protein At5g09900.2 OS=Ar... 237 3e-61 tr|B3H6B0|B3H6B0_ARATH Uncharacterized protein At5g09900.3 OS=Ar... 237 3e-61 tr|A7PKX7|A7PKX7_VITVI Chromosome chr7 scaffold_20, whole genome... 235 1e-60 tr|Q9FGF7|Q9FGF7_ARATH Proteasome regulatory subunit-like OS=Ara... 231 2e-59 tr|Q8VWK0|Q8VWK0_ARATH AT5g64760/MVP7_9 (26S proteasome subunit ... 231 2e-59 tr|Q851Y6|Q851Y6_ORYSJ Os03g0851300 protein OS=Oryza sativa subs... 229 6e-59 tr|B8ANQ0|B8ANQ0_ORYSI Putative uncharacterized protein OS=Oryza... 229 6e-59 tr|A3APT6|A3APT6_ORYSJ Putative uncharacterized protein OS=Oryza... 229 6e-59 tr|A9S9L3|A9S9L3_PHYPA Predicted protein OS=Physcomitrella paten... 210 5e-53 tr|A9TLD4|A9TLD4_PHYPA Predicted protein OS=Physcomitrella paten... 208 2e-52 tr|A5AEE8|A5AEE8_VITVI Putative uncharacterized protein OS=Vitis... 187 4e-46 tr|B7FFC4|B7FFC4_MEDTR Putative uncharacterized protein (Fragmen... 175 1e-42 tr|B6PFA0|B6PFA0_BRAFL Putative uncharacterized protein OS=Branc... 149 1e-34 tr|B6LDA1|B6LDA1_BRAFL Putative uncharacterized protein OS=Branc... 149 1e-34 tr|A4S859|A4S859_OSTLU Predicted protein OS=Ostreococcus lucimar... 149 1e-34 tr|A7SCN9|A7SCN9_NEMVE Predicted protein OS=Nematostella vectens... 142 9e-33 tr|Q4T0S8|Q4T0S8_TETNG Chromosome undetermined SCAF10875, whole ... 138 2e-31 tr|B5X386|B5X386_SALSA 26S proteasome non-ATPase regulatory subu... 137 3e-31 tr|Q8AW07|Q8AW07_DANRE Proteasome (Prosome, macropain) 26S subun... 134 3e-30 tr|Q6IQG7|Q6IQG7_DANRE Psmd12 protein (Fragment) OS=Danio rerio ... 134 3e-30 tr|Q28EG1|Q28EG1_XENTR Proteasome (Prosome, macropain) 26S subun... 132 2e-29 tr|A4IHT1|A4IHT1_XENTR Proteasome 26S non-ATPase subunit 12 OS=X... 132 2e-29 tr|Q2F5W8|Q2F5W8_BOMMO Proteasome 26S non-ATPase subunit 12 OS=B... 132 2e-29 tr|A9UME5|A9UME5_XENTR LOC100135329 protein OS=Xenopus tropicali... 131 2e-29 tr|A7YYF2|A7YYF2_DANRE Proteasome (Prosome, macropain) 26S subun... 131 2e-29 tr|Q5ZI37|Q5ZI37_CHICK Putative uncharacterized protein OS=Gallu... 130 4e-29
>tr|B3TM04|B3TM04_ELAGV 26S proteasome subunit RPN5b OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 440
Score = 245 bits (626), Expect = 1e-63 Identities = 130/186 (69%), Positives = 144/186 (77%) Frame = +2
Query: 2 SAMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAE 181 ++MV+Q MQYIDETPD++TRIELIKTLN+VSAGKIY KIKE+QGLIAE Sbjct: 67 TSMVQQAMQYIDETPDVDTRIELIKTLNSVSAGKIYVEIERARLIKKLAKIKEEQGLIAE 126
Query: 182 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXX 361 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDR DY+RAQIL+RKISPRVF AD Sbjct: 127 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADPSKE 186
Query: 362 XXXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKE 541 SLLELKRIYYELMIRY+SHNNDYLEICRS++AIYD P+VKE Sbjct: 187 KKKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYHSHNNDYLEICRSYKAIYDIPSVKE 246
Query: 542 DTSQSI 559 D +Q I Sbjct: 247 DPAQWI 252
>tr|B7FLC5|B7FLC5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 441
Score = 239 bits (611), Expect = 6e-62 Identities = 126/186 (67%), Positives = 141/186 (75%) Frame = +2
Query: 2 SAMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAE 181 +AMV+Q MQYIDETPD+ETRIELIKTLN+VSAGKIY KIKE+QGLIAE Sbjct: 69 TAMVQQAMQYIDETPDIETRIELIKTLNSVSAGKIYVEIERARLVKKLAKIKEEQGLIAE 128
Query: 182 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXX 361 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDR DY+RAQIL+RKISPRVF D Sbjct: 129 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDIDASKE 188
Query: 362 XXXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKE 541 SLLELK+IYYELMIRYYSHNNDYLEICR ++AIY+ P++KE Sbjct: 189 KKKPKEGDNMVEEAPADIPSLLELKQIYYELMIRYYSHNNDYLEICRCYKAIYEIPSIKE 248
Query: 542 DTSQSI 559 + + I Sbjct: 249 NPADFI 254
>tr|A9PH46|A9PH46_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 442
Score = 238 bits (606), Expect = 2e-61 Identities = 127/186 (68%), Positives = 141/186 (75%) Frame = +2
Query: 2 SAMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAE 181 +AMV+Q MQYIDET DL+TRIELIKTLN+VSAGKIY KIKE+QGLIAE Sbjct: 69 TAMVQQAMQYIDETLDLDTRIELIKTLNSVSAGKIYVEIERARLIRKLAKIKEEQGLIAE 128
Query: 182 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXX 361 AADLMQE+AVETFGAMAKTEKIAFILEQVRLCLDR DY+RAQIL+RKISPRVF AD Sbjct: 129 AADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADASKE 188
Query: 362 XXXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKE 541 SLLELKRIYYELMIRYYSH+NDYLEICR ++AIY+ P VKE Sbjct: 189 KKKPKEGDNVVEEAPADIPSLLELKRIYYELMIRYYSHDNDYLEICRCYKAIYEIPPVKE 248
Query: 542 DTSQSI 559 + +Q I Sbjct: 249 NPAQWI 254
>tr|Q9FIB6|Q9FIB6_ARATH 26S proteasome p55 protein-like (26S proteasome subunit RPN5a) OS=Arabidopsis thaliana GN=RPN5a PE=2 SV=1 Length = 442
Score = 237 bits (605), Expect = 3e-61 Identities = 124/185 (67%), Positives = 140/185 (75%) Frame = +2
Query: 5 AMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAEA 184 +MV+Q MQYID+TPD+ETRIELIKTLN VSAGKIY KIKE+QG IAEA Sbjct: 70 SMVQQAMQYIDQTPDIETRIELIKTLNNVSAGKIYVEIERARLTKKLAKIKEEQGQIAEA 129
Query: 185 ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXXX 364 ADLMQE+AVETFGAMAKTEKIAFILEQVRLCLDR D++RAQIL+RKI+PRVF ADT Sbjct: 130 ADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDRQDFVRAQILSRKINPRVFDADTKKDK 189
Query: 365 XXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKED 544 +LLELKRIYYELMIRYYSHNN+Y+EICRS++AIYD P+VKE Sbjct: 190 KKPKEGDNMVEEAPADIPTLLELKRIYYELMIRYYSHNNEYIEICRSYKAIYDIPSVKET 249
Query: 545 TSQSI 559 Q I Sbjct: 250 PEQWI 254
>tr|Q3E9J1|Q3E9J1_ARATH Uncharacterized protein At5g09900.2 OS=Arabidopsis thaliana GN=At5g09900 PE=4 SV=1 Length = 442
Score = 237 bits (605), Expect = 3e-61 Identities = 124/185 (67%), Positives = 140/185 (75%) Frame = +2
Query: 5 AMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAEA 184 +MV+Q MQYID+TPD+ETRIELIKTLN VSAGKIY KIKE+QG IAEA Sbjct: 70 SMVQQAMQYIDQTPDIETRIELIKTLNNVSAGKIYVEIERARLTKKLAKIKEEQGQIAEA 129
Query: 185 ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXXX 364 ADLMQE+AVETFGAMAKTEKIAFILEQVRLCLDR D++RAQIL+RKI+PRVF ADT Sbjct: 130 ADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDRQDFVRAQILSRKINPRVFDADTKKDK 189
Query: 365 XXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKED 544 +LLELKRIYYELMIRYYSHNN+Y+EICRS++AIYD P+VKE Sbjct: 190 KKPKEGDNMVEEAPADIPTLLELKRIYYELMIRYYSHNNEYIEICRSYKAIYDIPSVKET 249
Query: 545 TSQSI 559 Q I Sbjct: 250 PEQWI 254
>tr|B3H6B0|B3H6B0_ARATH Uncharacterized protein At5g09900.3 OS=Arabidopsis thaliana GN=At5g09900 PE=4 SV=1 Length = 462
Score = 237 bits (605), Expect = 3e-61 Identities = 124/185 (67%), Positives = 140/185 (75%) Frame = +2
Query: 5 AMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAEA 184 +MV+Q MQYID+TPD+ETRIELIKTLN VSAGKIY KIKE+QG IAEA Sbjct: 70 SMVQQAMQYIDQTPDIETRIELIKTLNNVSAGKIYVEIERARLTKKLAKIKEEQGQIAEA 129
Query: 185 ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXXX 364 ADLMQE+AVETFGAMAKTEKIAFILEQVRLCLDR D++RAQIL+RKI+PRVF ADT Sbjct: 130 ADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDRQDFVRAQILSRKINPRVFDADTKKDK 189
Query: 365 XXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKED 544 +LLELKRIYYELMIRYYSHNN+Y+EICRS++AIYD P+VKE Sbjct: 190 KKPKEGDNMVEEAPADIPTLLELKRIYYELMIRYYSHNNEYIEICRSYKAIYDIPSVKET 249
Query: 545 TSQSI 559 Q I Sbjct: 250 PEQWI 254
>tr|A7PKX7|A7PKX7_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019352001 PE=4 SV=1 Length = 320
Score = 235 bits (599), Expect = 1e-60 Identities = 124/186 (66%), Positives = 143/186 (76%) Frame = +2
Query: 2 SAMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAE 181 +AMV+Q MQYID+TPD+E++IELIKTLN+VSAGKIY KIKE+QG IAE Sbjct: 74 TAMVQQAMQYIDQTPDIESKIELIKTLNSVSAGKIYVEIERARLIKKLAKIKEEQGHIAE 133
Query: 182 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXX 361 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDR DY+RAQIL+RKISPRVF AD+ Sbjct: 134 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADSSKE 193
Query: 362 XXXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKE 541 SL ELKRIYYELMIRY+SH+NDYLEICRS++AIY+ P+V+E Sbjct: 194 KKKPKEGDSVVEEAPADIPSLPELKRIYYELMIRYHSHSNDYLEICRSYKAIYEIPSVRE 253
Query: 542 DTSQSI 559 D +Q I Sbjct: 254 DPAQWI 259
>tr|Q9FGF7|Q9FGF7_ARATH Proteasome regulatory subunit-like OS=Arabidopsis thaliana PE=4 SV=1 Length = 529
Score = 231 bits (589), Expect = 2e-59 Identities = 121/185 (65%), Positives = 140/185 (75%) Frame = +2
Query: 5 AMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAEA 184 +MV+Q MQYID+T D+ETRIELIKTLN V+AGKIY KIKE+QGLIAEA Sbjct: 157 SMVQQAMQYIDQTLDIETRIELIKTLNNVAAGKIYVEIERARLTKMLAKIKEEQGLIAEA 216
Query: 185 ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXXX 364 ADLMQE+AVETFGAMAKTEKIAFILEQVRLCLD+ D++RAQIL+RKI+PRVF ADT Sbjct: 217 ADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDQKDFVRAQILSRKINPRVFDADTTKEK 276
Query: 365 XXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKED 544 +LL LKRIYYELMIRYYSHNN+Y+EICRS++AIYD P+VKE+ Sbjct: 277 KKPKEGENMVEEAPADIPTLLVLKRIYYELMIRYYSHNNEYIEICRSYKAIYDIPSVKEN 336
Query: 545 TSQSI 559 Q I Sbjct: 337 PEQWI 341
>tr|Q8VWK0|Q8VWK0_ARATH AT5g64760/MVP7_9 (26S proteasome subunit RPN5b) OS=Arabidopsis thaliana GN=RPN5b PE=2 SV=1 Length = 442
Score = 231 bits (589), Expect = 2e-59 Identities = 121/185 (65%), Positives = 140/185 (75%) Frame = +2
Query: 5 AMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAEA 184 +MV+Q MQYID+T D+ETRIELIKTLN V+AGKIY KIKE+QGLIAEA Sbjct: 70 SMVQQAMQYIDQTLDIETRIELIKTLNNVAAGKIYVEIERARLTKMLAKIKEEQGLIAEA 129
Query: 185 ADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXXX 364 ADLMQE+AVETFGAMAKTEKIAFILEQVRLCLD+ D++RAQIL+RKI+PRVF ADT Sbjct: 130 ADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDQKDFVRAQILSRKINPRVFDADTTKEK 189
Query: 365 XXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKED 544 +LL LKRIYYELMIRYYSHNN+Y+EICRS++AIYD P+VKE+ Sbjct: 190 KKPKEGENMVEEAPADIPTLLVLKRIYYELMIRYYSHNNEYIEICRSYKAIYDIPSVKEN 249
Query: 545 TSQSI 559 Q I Sbjct: 250 PEQWI 254
>tr|Q851Y6|Q851Y6_ORYSJ Os03g0851300 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0015N08.15 PE=2 SV=1 Length = 443
Score = 229 bits (585), Expect = 6e-59 Identities = 120/186 (64%), Positives = 140/186 (75%) Frame = +2
Query: 2 SAMVKQCMQYIDETPDLETRIELIKTLNTVSAGKIYXXXXXXXXXXXXTKIKEDQGLIAE 181 +AMV++ M+YID TPD++TRIELIKTL++VSAGKIY KIKE+QG I E Sbjct: 70 TAMVQKAMEYIDLTPDMDTRIELIKTLSSVSAGKIYVEIERARLIKRLAKIKEEQGQIDE 129
Query: 182 AADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRNDYMRAQILARKISPRVFVADTXXX 361 AADLMQE+AVETFG+MAKTEKIAFILEQVRLCLDR DY+RAQIL+RKISPRVF AD Sbjct: 130 AADLMQEVAVETFGSMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADPSKE 189
Query: 362 XXXXXXXXXXXXXXXXXXXSLLELKRIYYELMIRYYSHNNDYLEICRSFQAIYDTPTVKE 541 SLLELKRIYYELMIRYYSHNNDYLEICR +++IY+ P++KE Sbjct: 190 KKKPKEGDNIVQEAPAEIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKSIYEIPSIKE 249
Query: 542 DTSQSI 559 D S+ I Sbjct: 250 DPSKWI 255
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