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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953324
Clone id TST39A01NGRL0017_H14
Library
Length 450
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_H14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGGGGGCGGGGGGGGGGGAGAGAGGAAATAGGGGAGGAAGGACCGTGGTCCGTAAACCGA
CTCTTTTGCATCGCTGCTACCTACAAATCGCATCTCTCTCTCATACGGAGTAATCTGTGT
CTCGGCACGCGACACACACACACACCCCACTCTCAGTTCCGAATTTGCTGCTCTGGGTTC
CTTCCGTCAAGATCATCTGCTCCGCTTGCATTCACCTTTCTCATCTCGTGCTCTTTACAT
GGGCGTCACTGCCGTCAATGCTATGCAACAAGCAGCTCTTGTCAAGGATCGGCTGTACGC
AGGGGACGATCATCTCCATTTCACGCACAGAGGGAAACAAAGGCTATCGCTTAAGCAATC
TTCCCTGAAATGGGCTTCGTCTCCACGCACACCTCGGCGTGCTCTTCTTCCTAAAAACTC
AACAGGTCATGCAGCTGCCATGAAGCGCCC
■■Homology search results ■■ -
sp_hit_id Q2UNX5
Definition sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae
Align length 45
Score (bit) 30.8
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953324|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_H14, 5'
         (450 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae ...    31   2.8  
sp|Q7N2E0|LSRR_PHOLL Transcriptional regulator lsrR OS=Photorhab...    30   6.1  
sp|A0JY64|ATPB_ARTS2 ATP synthase subunit beta OS=Arthrobacter s...    30   6.1  
sp|A1R7V3|ATPB_ARTAT ATP synthase subunit beta OS=Arthrobacter a...    30   6.1  
sp|Q924Z9|NET1_RAT Netrin-1 OS=Rattus norvegicus GN=Ntn1 PE=2 SV=1     30   6.3  
sp|O09118|NET1_MOUSE Netrin-1 OS=Mus musculus GN=Ntn1 PE=1 SV=2        30   6.3  
sp|Q9JJV1|CRBA2_MOUSE Beta-crystallin A2 OS=Mus musculus GN=Cryb...    30   6.3  
sp|Q2HXW4|NET1_PIG Netrin-1 OS=Sus scrofa GN=NTN1 PE=2 SV=1            29   8.2  
sp|O95631|NET1_HUMAN Netrin-1 OS=Homo sapiens GN=NTN1 PE=1 SV=1        29   8.2  
sp|Q9LRK1|CRR36_ARATH Putative cysteine-rich repeat secretory pr...    29   8.2  

>sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae
            GN=dcl2 PE=3 SV=1
          Length = 1377

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 121  LGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHGRHCR 255
            +G  +    HS+ +IC   FLP  +  PL    LI+ + HGR  R
Sbjct: 1044 IGAAYLDGGHSKAQICTHCFLPEVNRQPLDIPSLITQTEHGRTAR 1088


>sp|Q7N2E0|LSRR_PHOLL Transcriptional regulator lsrR OS=Photorhabdus
           luminescens subsp. laumondii GN=lsrR PE=2 SV=2
          Length = 307

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +2

Query: 146 PTLSSEFAALGSFRQDHLLR--LHSPFSSRALYMGVTAVNAMQQAALVKDRLYAGDDHLH 319
           P  +S      +FRQ+  +R  L +  ++    +G+ AVN  QQA +++    +G + L 
Sbjct: 163 PLRASTAQVAETFRQESSVRDVLLAACAADIAIVGIGAVNQQQQATIMRSGYISGGEQLM 222

Query: 320 FTHRG 334
           F  +G
Sbjct: 223 FGRKG 227


>sp|A0JY64|ATPB_ARTS2 ATP synthase subunit beta OS=Arthrobacter sp.
           (strain FB24) GN=atpD PE=3 SV=1
          Length = 484

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 23/72 (31%), Positives = 32/72 (44%)
 Frame = +2

Query: 131 DTHTHPTLSSEFAALGSFRQDHLLRLHSPFSSRALYMGVTAVNAMQQAALVKDRLYAGDD 310
           D +T P  ++ FA L     D    L    +SR LY    AV+ +   + + D  Y G D
Sbjct: 321 DDYTDPAPATTFAHL-----DATTELSREIASRGLY---PAVDPLTSTSRILDPQYIGKD 372

Query: 311 HLHFTHRGKQRL 346
           H +   R KQ L
Sbjct: 373 HYNTAVRVKQIL 384


>sp|A1R7V3|ATPB_ARTAT ATP synthase subunit beta OS=Arthrobacter
           aurescens (strain TC1) GN=atpD PE=3 SV=2
          Length = 483

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 23/72 (31%), Positives = 32/72 (44%)
 Frame = +2

Query: 131 DTHTHPTLSSEFAALGSFRQDHLLRLHSPFSSRALYMGVTAVNAMQQAALVKDRLYAGDD 310
           D +T P  ++ FA L     D    L    +SR LY    AV+ +   + + D  Y G D
Sbjct: 320 DDYTDPAPATTFAHL-----DATTELSREIASRGLY---PAVDPLTSTSRILDPQYIGKD 371

Query: 311 HLHFTHRGKQRL 346
           H +   R KQ L
Sbjct: 372 HYNTAVRVKQIL 383


>sp|Q924Z9|NET1_RAT Netrin-1 OS=Rattus norvegicus GN=Ntn1 PE=2 SV=1
          Length = 604

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
 Frame = +1

Query: 226 SCSLHGRHCR---QCYATSSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMGFVSTHTS 396
           +C+LH R CR   + Y  S    G      R +   A R         + +MG   TH  
Sbjct: 342 NCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNT--AGRHCHYCKEGFYRDMGKPITHRK 399

Query: 397 ACSSS*KLNRSCSCH 441
           AC       ++C CH
Sbjct: 400 AC-------KACDCH 407


>sp|O09118|NET1_MOUSE Netrin-1 OS=Mus musculus GN=Ntn1 PE=1 SV=2
          Length = 604

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
 Frame = +1

Query: 226 SCSLHGRHCR---QCYATSSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMGFVSTHTS 396
           +C+LH R CR   + Y  S    G      R +   A R         + +MG   TH  
Sbjct: 342 NCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNT--AGRHCHYCKEGFYRDMGKPITHRK 399

Query: 397 ACSSS*KLNRSCSCH 441
           AC       ++C CH
Sbjct: 400 AC-------KACDCH 407


>sp|Q9JJV1|CRBA2_MOUSE Beta-crystallin A2 OS=Mus musculus GN=Cryba2
           PE=2 SV=3
          Length = 197

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 184 PSRSSAPLAFTFLISCSLHGRHCRQCYATSSSCQGSAVRRGRS 312
           P+  SAP+  T        GR CR     ++ C+  A+RR RS
Sbjct: 5   PAPGSAPVCLTLWDEEDFQGRRCRLLSDCANVCERGALRRVRS 47


>sp|Q2HXW4|NET1_PIG Netrin-1 OS=Sus scrofa GN=NTN1 PE=2 SV=1
          Length = 600

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
 Frame = +1

Query: 226 SCSLHGRHCR---QCYATSSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMGFVSTHTS 396
           +C+LH R CR   + Y  S    G      R +   A R         F ++G   TH  
Sbjct: 342 NCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNT--AGRHCHYCKEGYFRDLGKPITHRK 399

Query: 397 ACSSS*KLNRSCSCH 441
           AC       ++C CH
Sbjct: 400 AC-------KACDCH 407


>sp|O95631|NET1_HUMAN Netrin-1 OS=Homo sapiens GN=NTN1 PE=1 SV=1
          Length = 604

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
 Frame = +1

Query: 226 SCSLHGRHCR---QCYATSSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMGFVSTHTS 396
           +C+LH R CR   + Y  S    G      R +   A R         + +MG   TH  
Sbjct: 342 NCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNT--AGRHCHYCKEGYYRDMGKPITHRK 399

Query: 397 ACSSS*KLNRSCSCH 441
           AC       ++C CH
Sbjct: 400 AC-------KACDCH 407


>sp|Q9LRK1|CRR36_ARATH Putative cysteine-rich repeat secretory
           protein 36 OS=Arabidopsis thaliana GN=CRRSP36 PE=5 SV=2
          Length = 251

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 7/41 (17%)
 Frame = +1

Query: 187 SRSSAPLAFTFLISC--SLHGRHCRQCYATSSS-----CQG 288
           SR  AP   T +  C    +G  CR CYAT  S     CQG
Sbjct: 78  SRGEAPNFVTIVFQCRGDSYGSKCRSCYATPISGIRRRCQG 118
tr_hit_id A7ELV8
Definition tr|A7ELV8|A7ELV8_SCLS1 Putative uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)
Align length 115
Score (bit) 36.6
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953324|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_H14, 5'
         (450 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7ELV8|A7ELV8_SCLS1 Putative uncharacterized protein OS=Scler...    37   0.65 
tr|Q4RXE6|Q4RXE6_TETNG Chromosome 11 SCAF14979, whole genome sho...    36   1.1  
tr|A4HDT5|A4HDT5_LEIBR Putative uncharacterized protein OS=Leish...    35   1.9  
tr|B5DYF9|B5DYF9_DROPS GA26552 OS=Drosophila pseudoobscura pseud...    35   2.5  
tr|A6SSD6|A6SSD6_BOTFB Putative uncharacterized protein OS=Botry...    35   2.5  
tr|Q7UMA0|Q7UMA0_RHOBA Putative uncharacterized protein OS=Rhodo...    34   4.2  
tr|A6UAR1|A6UAR1_SINMW Putative uncharacterized protein OS=Sinor...    33   5.5  
tr|A4G2U9|A4G2U9_HERAR Putative uncharacterized protein OS=Hermi...    33   5.5  
tr|B2AD93|B2AD93_PODAN Predicted CDS Pa_4_450 OS=Podospora anser...    33   7.1  
tr|B8NIA3|B8NIA3_ASPFL RNA helicase/RNAse III, putative OS=Asper...    33   9.3  

>tr|A7ELV8|A7ELV8_SCLS1 Putative uncharacterized protein
            OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
            Ss-1) GN=SS1G_06305 PE=4 SV=1
          Length = 1464

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
 Frame = +2

Query: 68   ASLLPTNRISLSYGVICVSARDTHTHPTL---SSEFAALGSFRQDHLLRLHSPFSSRALY 238
            AS +   + +L Y +   S    H  P +     +   +  +R  H+LR HSP+S     
Sbjct: 1060 ASAVWNGKEALDYLLAADSPNPPHPKPDIILMDVQMPIIDGYRATHILRHHSPYSYSTRN 1119

Query: 239  MGVTAVNA-MQQAALVKDRLYAGDDHLHFTHRGKQRLSLKQSSLKWASSPRTPRR 400
            + + A+ A + Q    K +    DD+L    +GK   +L++  ++WA + R P++
Sbjct: 1120 IPIVAMTASVIQGDREKCQKAGMDDYLAKPVKGK---TLEKMLVRWAINRRVPKQ 1171


>tr|Q4RXE6|Q4RXE6_TETNG Chromosome 11 SCAF14979, whole genome
           shotgun sequence OS=Tetraodon nigroviridis
           GN=GSTENG00027444001 PE=4 SV=1
          Length = 756

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 26/77 (33%), Positives = 37/77 (48%)
 Frame = +2

Query: 215 PFSSRALYMGVTAVNAMQQAALVKDRLYAGDDHLHFTHRGKQRLSLKQSSLKWASSPRTP 394
           P SS      V+A +AM+ A   +   +  DD LHF  R KQR   K  S +W +     
Sbjct: 368 PSSSLCFQKTVSADSAMEVAGEHEPGSHL-DDSLHFQQRSKQR-RRKMGSTRWTNKSPEV 425

Query: 395 RRALLPKNSTGHAAAMK 445
           RRA + +NS    A+ +
Sbjct: 426 RRAAVTENSDSAQASQE 442


>tr|A4HDT5|A4HDT5_LEIBR Putative uncharacterized protein
           OS=Leishmania braziliensis GN=LbrM24_V2.2320 PE=4 SV=1
          Length = 376

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 25/109 (22%), Positives = 41/109 (37%)
 Frame = +1

Query: 67  CIAATYKSHLSLIRSNLCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHGR 246
           C   T  + L L+R+  C G R  H P     +     + +++  P A            
Sbjct: 92  CTGFTVLTRLGLMRNMKCCGNRCRHCPFGHVNVQSKRLMTTKAEGPFA------------ 139

Query: 247 HCRQCYATSSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMGFVSTHT 393
                 ATS+S   ++     ++P  A R+ KA +    P+   V T T
Sbjct: 140 ------ATSASSAATSAEASSAAPTAAARDGKAASGGNVPKRSMVYTKT 182


>tr|B5DYF9|B5DYF9_DROPS GA26552 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA26552 PE=4 SV=1
          Length = 2220

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 18/139 (12%)
 Frame = +2

Query: 80  PTNRISLSYGVICVSARDTHTHPTLSSEFAAL--------GSFRQDHLLRLHSPFSSRAL 235
           P+N  SLS G+      +T   P  S     +        G+     L     PF+  A 
Sbjct: 182 PSNSASLSRGL-----NNTGMPPHFSQSAGLIATTGGNGAGAPTSGFLTTAFLPFNQAAQ 236

Query: 236 YMGVTAV------NAMQQAALVKDRLYAGDDHLHFTHRG-KQRLSLKQSSLKWA---SSP 385
            MG+  V           AA      ++    LH +HRG +QR +  Q    +A    +P
Sbjct: 237 IMGMQPVAFSNGAGGAPAAAFYTAAAHSQQQQLHNSHRGIRQRSATPQHQSYYAYTVGAP 296

Query: 386 RTPRRALLPKNSTGHAAAM 442
            TPR A++ + +TG  A M
Sbjct: 297 TTPRAAMVNQTTTGSVAPM 315


>tr|A6SSD6|A6SSD6_BOTFB Putative uncharacterized protein
           OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_15680
           PE=4 SV=1
          Length = 486

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
 Frame = +2

Query: 95  SLSYGVICVSARDTHTHPTL---SSEFAALGSFRQDHLLRLHSPFSSRALYMGVTAVNAM 265
           +L Y +   S    H  P +     +   +  +R  H+LR HSP+   A  + + A+ A 
Sbjct: 44  ALDYLLAADSPNPPHPKPDIILMDVQMPIIDGYRATHILRHHSPYRYSACDIPIVAMTAS 103

Query: 266 Q-QAALVKDRLYAGDDHLHFTHRGKQRLSLKQSSLKWASSPRTPR 397
             Q    K +    DD+L    +GK   +L++  ++WA + R P+
Sbjct: 104 AIQGDREKCQKAGMDDYLAKPVKGK---TLEKMLVRWAINRRVPK 145


>tr|Q7UMA0|Q7UMA0_RHOBA Putative uncharacterized protein
           OS=Rhodopirellula baltica GN=RB8965 PE=4 SV=1
          Length = 97

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = +3

Query: 123 RHATHTHTPLSVPNLLLWVPSVKIICSACIHLSHLVLFTWASLPSMLCNKQLLSRIGCTQ 302
           R  T T+T L  P     +P VK++ +    +  L LF W +  ++ C  + L R+G   
Sbjct: 2   RTGTVTNTTLRTPRNDAQLPQVKVLKAKRSMILELQLFAWQAFRAVSCRSKRLHRLGKIL 61

Query: 303 GTIISISRT 329
              + ISR+
Sbjct: 62  TGHVEISRS 70


>tr|A6UAR1|A6UAR1_SINMW Putative uncharacterized protein
           OS=Sinorhizobium medicae (strain WSM419) GN=Smed_1907
           PE=4 SV=1
          Length = 250

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = -2

Query: 344 AFVSLCA*NGDDRPLRTADP*QELLVA*H*RQ*RPCKEHEMRKVNASGADDLDGRNP 174
           +FVS+     DDRP ++  P +E   + H R  R C+E   RK+N +G D+     P
Sbjct: 185 SFVSILEGKYDDRPQQSQAPPRE---SEHARHQRECREAIQRKLNGNGHDEFASTGP 238


>tr|A4G2U9|A4G2U9_HERAR Putative uncharacterized protein
           OS=Herminiimonas arsenicoxydans GN=HEAR0638 PE=4 SV=1
          Length = 271

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
 Frame = +3

Query: 57  PTLLHRCYLQIASLSHTE*SVSRHATHTHTPLSVPNLLLW----VPSVKIICSACIHLSH 224
           P L     +Q ASL      +SR    T   L++PNL++W    +  VK++ S    +  
Sbjct: 23  PVLWAAARMQRASLK-----ISREDMGTIFTLAIPNLMIWNIFMIVGVKMLSSGRAAILG 77

Query: 225 LVLFTWASLPSMLCNKQLLSRIG-CTQGTIIS 317
             +  WA L  ++  +  +SR+G C  G  +S
Sbjct: 78  YTMPVWAILSGLIFFRDRISRLGWCGIGFALS 109


>tr|B2AD93|B2AD93_PODAN Predicted CDS Pa_4_450 OS=Podospora anserina
           PE=4 SV=1
          Length = 695

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 181 LPSRSSAPLAFTFLISCSLHGRHCRQCYATSSSCQGSAVRRGRSSPFHAQRETKAIA 351
           L  R +  L F   I C +    C  C   ++ C+ +AVRR    P  A+ +T A A
Sbjct: 7   LSRRKACDLCFVKKIKCDMVKPQCSNCKQYNTECKTTAVRRRIGRPKVARHDTNASA 63


>tr|B8NIA3|B8NIA3_ASPFL RNA helicase/RNAse III, putative
            OS=Aspergillus flavus NRRL3357 GN=AFLA_065990 PE=4 SV=1
          Length = 1339

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 121  LGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHGRHCRQ 258
            +G  +    HS+ +IC   FLP  +  PL    LI+ + HGR  RQ
Sbjct: 1044 IGAAYLDGGHSKAQICTHCFLPEVNRQPLDIPSLITQTEHGRTARQ 1089