DK953231 |
Clone id |
TST39A01NGRL0017_D16 |
Library |
TST39 |
Length |
564 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_D16. 5' end sequence. |
Accession |
DK953231 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CACGCACACATCTCTGGCGGGATTCTGCTCAAAACAAGAGCACGCGATCTCCTCGGCACA CAGAAAGAACCAGATAGACAAGATCAGGGCTTCACGGAGAAAATAATAGCCTGAACCTTA GGATAAGCTGAAGATGAATGGTGAGAGTGAGGACGGAGATCATCATGATCCGCACCAGCA AGAGCACACAGGGAAGGGAGATGGAGCAGAGAGCTGCAGCTCTGTTGGAAGCATGATTCC CAAGCGCGTGAGTGCACTTGTACAGGAAGCCAAAACCCTACAGAGCGGGGCCTCAGCCCT TAGTGCACGCCTGAGGGTCGAGGAGCAAGCCCTCAGCCAGCAGGCCCTCGCACTTGAGAA GGATATGCAGAGCCTCAGATCTGATGTTTTCTCTGCAGTTGAGAGAGAGGAGATTATCCC TCAGCTTGCTGAGAAGTTGGAGGAGGAGATTGACAGAGCACACTGGATGATCTGCGAGGG GGATGTAGGGGCACTTCTTCCTCACAAATACAATGGCCTTTTTCTTCGCCTGCTTCTTGG CCCTGTCAATGTCAAAGCATCGCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ULE4 |
Definition |
sp|Q9ULE4|F184B_HUMAN Protein FAM184B OS=Homo sapiens |
Align length |
100 |
Score (bit) |
38.5 |
E-value |
0.023 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953231|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_D16, 5' (564 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9ULE4|F184B_HUMAN Protein FAM184B OS=Homo sapiens GN=FAM184B... 39 0.023 sp|Q03M43|CNPD_STRTD 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 37 0.088 sp|Q5M5Q8|CNPD_STRT2 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 37 0.088 sp|Q5M171|CNPD_STRT1 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 37 0.088 sp|Q96R06|SPAG5_HUMAN Sperm-associated antigen 5 OS=Homo sapiens... 35 0.20 sp|Q9BXJ8|T120A_HUMAN Transmembrane protein 120A OS=Homo sapiens... 35 0.25 sp|Q5HZE2|T120A_RAT Transmembrane protein 120A OS=Rattus norvegi... 35 0.33 sp|Q05B45|T120A_BOVIN Transmembrane protein 120A OS=Bos taurus G... 35 0.33 sp|Q3TVW5|TCHP_MOUSE Trichoplein keratin filament-binding protei... 34 0.57 sp|Q8C1E7|T120A_MOUSE Transmembrane protein 120A OS=Mus musculus... 34 0.57 sp|Q8C1F4|CGAT2_MOUSE Chondroitin sulfate N-acetylgalactosaminyl... 33 0.74 sp|Q1LY80|T120B_DANRE Transmembrane protein 120B OS=Danio rerio ... 33 0.97 sp|P51834|SMC_BACSU Chromosome partition protein smc OS=Bacillus... 33 1.3 sp|P40328|TBP6_YEAST Probable 26S protease subunit YTA6 OS=Sacch... 32 1.7 sp|A0PK00|T120B_HUMAN Transmembrane protein 120B OS=Homo sapiens... 32 1.7 sp|Q6PCJ1|DCTN1_XENLA Dynactin subunit 1 OS=Xenopus laevis GN=dc... 32 1.7 sp|Q63ZG0|T120B_XENTR Transmembrane protein 120B OS=Xenopus trop... 32 2.2 sp|P08855|ICAL_RABIT Calpastatin OS=Oryctolagus cuniculus GN=CAS... 32 2.2 sp|Q5SHB3|CNPD_THET8 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.8 sp|Q5JPF3|U634C_HUMAN UPF0634 protein C OS=Homo sapiens PE=2 SV=2 31 3.7 sp|Q9CK91|RPOB_PASMU DNA-directed RNA polymerase subunit beta OS... 31 3.7 sp|B0URZ6|RPOB_HAES2 DNA-directed RNA polymerase subunit beta OS... 31 3.7 sp|Q0I5B7|RPOB_HAES1 DNA-directed RNA polymerase subunit beta OS... 31 3.7 sp|Q15149|PLEC1_HUMAN Plectin-1 OS=Homo sapiens GN=PLEC1 PE=1 SV=3 31 3.7 sp|A8AVU9|CNPD_STRGC 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 31 3.7 sp|Q7T2V3|M3K10_XENLA Mitogen-activated protein kinase kinase ki... 31 4.8 sp|Q9Y2I7|FYV1_HUMAN FYVE finger-containing phosphoinositide kin... 31 4.8 sp|Q72HM1|CNPD_THET2 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 31 4.8 sp|Q49LS8|XKR6_TETNG XK-related protein 6 OS=Tetraodon nigroviri... 31 4.9 sp|Q8N2N9|U634B_HUMAN UPF0634 protein B OS=Homo sapiens GN=ANKRD... 30 6.3
>sp|Q9ULE4|F184B_HUMAN Protein FAM184B OS=Homo sapiens GN=FAM184B PE=2 SV=2 Length = 1060
Score = 38.5 bits (88), Expect = 0.023 Identities = 24/100 (24%), Positives = 53/100 (53%) Frame = +2
Query: 146 SEDGDHHDPHQQEHTGKGDGAESCSSVGSMIPKRVSALVQEAKTLQSGASALSARLRVEE 325 +E+G D ++ +G++ +GS++ ++ S + + + QS + L A++ + Sbjct: 554 AEEGTSSDEEERTKVLLKEGSDPQPPLGSLLKEKTSKIQRLEEDWQSQKAKLQAQVSQMQ 613
Query: 326 QALSQQALALEKDMQSLRSDVFSAVEREEIIPQLAEKLEE 445 QAL Q +D+Q+L+ S +ERE++ +L E ++ Sbjct: 614 QALEQCTSNYREDLQALKQ--LSDLEREKLQRELQETTQQ 651
>sp|Q03M43|CNPD_STRTD 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=STER_0442 PE=3 SV=1 Length = 532
Score = 36.6 bits (83), Expect = 0.088 Identities = 22/65 (33%), Positives = 36/65 (55%) Frame = +2
Query: 263 QEAKTLQSGASALSARLRVEEQALSQQALALEKDMQSLRSDVFSAVEREEIIPQLAEKLE 442 QE K +++ + + L +++ LS + LALEK QSL EREE + QL + + Sbjct: 94 QELKQMENRLTERATSLDRKDENLSSKELALEKKEQSLADKSKHLNEREENVAQLEAEKQ 153
Query: 443 EEIDR 457 E++R Sbjct: 154 AELER 158
>sp|Q5M5Q8|CNPD_STRT2 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=stu0397 PE=3 SV=1 Length = 535
Score = 36.6 bits (83), Expect = 0.088 Identities = 22/65 (33%), Positives = 36/65 (55%) Frame = +2
Query: 263 QEAKTLQSGASALSARLRVEEQALSQQALALEKDMQSLRSDVFSAVEREEIIPQLAEKLE 442 QE K +++ + + L +++ LS + LALEK QSL EREE + QL + + Sbjct: 97 QELKQMENRLTERATSLDRKDENLSSKELALEKKEQSLADKSKHLNEREENVTQLEAEKQ 156
Query: 443 EEIDR 457 E++R Sbjct: 157 AELER 161
>sp|Q5M171|CNPD_STRT1 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=str0397 PE=3 SV=1 Length = 535
Score = 36.6 bits (83), Expect = 0.088 Identities = 22/65 (33%), Positives = 36/65 (55%) Frame = +2
Query: 263 QEAKTLQSGASALSARLRVEEQALSQQALALEKDMQSLRSDVFSAVEREEIIPQLAEKLE 442 QE K +++ + + L +++ LS + LALEK QSL EREE + QL + + Sbjct: 97 QELKQMENRLTERATSLDRKDENLSSKELALEKKEQSLADKSKHLNEREENVTQLEAEKQ 156
Query: 443 EEIDR 457 E++R Sbjct: 157 AELER 161
>sp|Q96R06|SPAG5_HUMAN Sperm-associated antigen 5 OS=Homo sapiens GN=SPAG5 PE=1 SV=2 Length = 1193
Score = 35.4 bits (80), Expect = 0.20 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%) Frame = +2
Query: 254 ALVQEAK-----TLQSGASALSARLRVEEQALSQQALALEKDMQSLRSDVF----SAVER 406 +L+QE+K TLQ L ARL+ +E+ + A E D++ L + + E Sbjct: 985 SLLQESKEEAIRTLQRKICELQARLQAQEEQHQEVQKAKEADIEKLNQALCLRYKNEKEL 1044
Query: 407 EEIIPQLAEKLEEEIDRAHWMI 472 +E+I Q EK+ E+ID++ +I Sbjct: 1045 QEVIQQQNEKILEQIDKSGELI 1066
>sp|Q9BXJ8|T120A_HUMAN Transmembrane protein 120A OS=Homo sapiens GN=TMEM120A PE=2 SV=1 Length = 343
Score = 35.0 bits (79), Expect = 0.25 Identities = 31/98 (31%), Positives = 51/98 (52%) Frame = +2
Query: 260 VQEAKTLQSGASALSARLRVEEQALSQQALALEKDMQSLRSDVFSAVEREEIIPQLAEKL 439 ++E LQ+ ++ R +++ L + ALAL+K SL ++ A A++L Sbjct: 37 LEELTKLQNNCTSSITR---QKKRLQELALALKKCKPSLPAEAEGA----------AQEL 83
Query: 440 EEEIDRAHWMICEGDVGALLPHKYNGLFLRLLLGPVNV 553 E ++ + D+ A LP K NGL+L L+LG VNV Sbjct: 84 ENQMKERQGLFF--DMEAYLPKK-NGLYLSLVLGNVNV 118
>sp|Q5HZE2|T120A_RAT Transmembrane protein 120A OS=Rattus norvegicus GN=Tmem120a PE=2 SV=1 Length = 343
Score = 34.7 bits (78), Expect = 0.33 Identities = 28/78 (35%), Positives = 41/78 (52%) Frame = +2
Query: 320 EEQALSQQALALEKDMQSLRSDVFSAVEREEIIPQLAEKLEEEIDRAHWMICEGDVGALL 499 +++ L + AL L+K SL S+ A A++LE +I + D+ A L Sbjct: 54 QKKRLQELALVLKKCRPSLPSESLEA----------AQELESQIKERQGLFF--DMEAYL 101
Query: 500 PHKYNGLFLRLLLGPVNV 553 P K NGL+L L+LG VNV Sbjct: 102 PKK-NGLYLSLVLGNVNV 118
>sp|Q05B45|T120A_BOVIN Transmembrane protein 120A OS=Bos taurus GN=TMEM120A PE=2 SV=1 Length = 343
Score = 34.7 bits (78), Expect = 0.33 Identities = 32/98 (32%), Positives = 48/98 (48%) Frame = +2
Query: 260 VQEAKTLQSGASALSARLRVEEQALSQQALALEKDMQSLRSDVFSAVEREEIIPQLAEKL 439 ++E LQ+ ++ R +++ L + AL L K SL S+ A A +L Sbjct: 37 LEELTKLQNSCTSSITR---QKKRLQELALVLRKCKPSLPSEAEEA----------AREL 83
Query: 440 EEEIDRAHWMICEGDVGALLPHKYNGLFLRLLLGPVNV 553 E +I + D+ A LP K NGL+L L+LG VNV Sbjct: 84 ENQIKERQGLFF--DMEAYLPKK-NGLYLSLVLGNVNV 118
>sp|Q3TVW5|TCHP_MOUSE Trichoplein keratin filament-binding protein OS=Mus musculus GN=Tchp PE=1 SV=2 Length = 497
Score = 33.9 bits (76), Expect = 0.57 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 14/98 (14%) Frame = +2
Query: 263 QEAKTLQSGASAL----SARLRVEEQALSQ----QALALEKDMQSLRSDVFSAV----ER 406 QE K L++ +A AR+RVEE+ QA AL + M+ L+ A E+ Sbjct: 181 QENKRLENQYAAARREAEARMRVEEERRQLEGRLQAEALRQQMEELKQKEMEATKLKKEQ 240
Query: 407 EEIIPQL--AEKLEEEIDRAHWMICEGDVGALLPHKYN 514 E ++ Q E+LEEE + + + ++G L H+YN Sbjct: 241 ENLLRQRWELERLEEERRQMAALRRKTELGRFLKHQYN 278
>sp|Q8C1E7|T120A_MOUSE Transmembrane protein 120A OS=Mus musculus GN=Tmem120a PE=2 SV=1 Length = 343
Score = 33.9 bits (76), Expect = 0.57 Identities = 31/98 (31%), Positives = 49/98 (50%) Frame = +2
Query: 260 VQEAKTLQSGASALSARLRVEEQALSQQALALEKDMQSLRSDVFSAVEREEIIPQLAEKL 439 ++E LQ+ + R +++ L + AL L+K SL S+ A A++L Sbjct: 37 LEELTKLQANCTNSITR---QKKRLQELALVLKKCRPSLPSESMEA----------AQEL 83
Query: 440 EEEIDRAHWMICEGDVGALLPHKYNGLFLRLLLGPVNV 553 E ++ + D+ A LP K NGL+L L+LG VNV Sbjct: 84 ENQMKERQGLFF--DMEAYLPKK-NGLYLSLVLGNVNV 118
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLE5 |
Definition |
tr|B8LLE5|B8LLE5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
118 |
Score (bit) |
106.0 |
E-value |
1.0e-21 |
Report |
|