DK953159 |
Clone id |
TST39A01NGRL0017_A15 |
Library |
TST39 |
Length |
597 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_A15. 5' end sequence. |
Accession |
DK953159 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3511Contig1 |
Sequence |
ATCAATATCATATGCGAGCGCATGTCTACCAATAAGGAGCTCTTTTCTAGTCATGCTATA GGAGATAGTATGCGAGTTTAAGGATCATCAAGGTAGTTGAGACTCAGTTTGGTATGGAAC TTGAAACCCAGGGGGAAAAAAGGAAAAAGAAGGTGCTAATTAGAGGGGCCGGCCCGCCAA AATGACTTGTGCGCTTTGGTGCCGAAGCAATGTTCAGTAGTTGACAGCAATGGAAAGGAG CGAGCTGACTGTTGTTGAAGATCAGGGCTTGTACGCAAATCCCTGTGGCTACTGCAAGTC TCAAGGTCCAACCAGTTTTGCTCATGGTCTATGGGCTCACTCCTTGTCACCATATGATTA TCAAGAGCTTCTTGATCAAAATTGGAGAAGATCAGGCATGGTTCTTTATCGGCCAGAGCT AGAACGATCATGTTGTCCAGCATATACAATTCGTCTGAAGGCTGGTTGCATGGAAAAATC TAGTGAGCATGTTCGTGCTATGCGTCGGATGCAAAGGTATTTGGATGGAGTCTACTCTAG CCCTTCTTCCGGGAGAAAGGAAACTGAATTGGCTGAAGAAGTAATGGACATTGATGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZT48 |
Definition |
sp|Q9ZT48|ATE1_ARATH Arginyl-tRNA--protein transferase 1 OS=Arabidopsis thaliana |
Align length |
94 |
Score (bit) |
108.0 |
E-value |
2.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TV97 |
Definition |
tr|A9TV97|A9TV97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
97 |
Score (bit) |
123.0 |
E-value |
9.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953159|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_A15, 5' (597 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TV97|A9TV97_PHYPA Predicted protein OS=Physcomitrella paten... 123 9e-27 tr|A7Q3F3|A7Q3F3_VITVI Chromosome chr13 scaffold_48, whole genom... 120 5e-26 tr|Q688J5|Q688J5_ORYSJ Os05g0446800 protein OS=Oryza sativa subs... 119 1e-25 tr|B8AYR5|B8AYR5_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|Q9C776|Q9C776_ARATH Arginine-tRNA-protein transferase, putati... 112 2e-23 tr|Q682K5|Q682K5_ARATH Arginine-tRNA-protein transferase 1 homol... 108 2e-22 tr|Q67YK9|Q67YK9_ARATH Arginine-tRNA-protein transferase 1 homol... 108 2e-22 tr|Q56ZQ7|Q56ZQ7_ARATH At5g05700 OS=Arabidopsis thaliana GN=At5g... 108 2e-22 tr|Q6INP2|Q6INP2_XENLA MGC81517 protein OS=Xenopus laevis GN=MGC... 98 3e-19 tr|Q178G8|Q178G8_AEDAE Arginyltransferase, putative OS=Aedes aeg... 92 3e-17 tr|Q178G7|Q178G7_AEDAE Arginyltransferase, putative OS=Aedes aeg... 92 3e-17 tr|Q178G6|Q178G6_AEDAE Arginyltransferase, putative OS=Aedes aeg... 92 3e-17 tr|B0XEM1|B0XEM1_CULQU Arginyl-tRNA-protein transferase 1 OS=Cul... 91 4e-17 tr|Q4P2B7|Q4P2B7_USTMA Putative uncharacterized protein OS=Ustil... 91 5e-17 tr|Q5F446|Q5F446_CHICK Putative uncharacterized protein OS=Gallu... 90 1e-16 tr|A5PKR5|A5PKR5_XENLA LOC100101312 protein OS=Xenopus laevis GN... 89 1e-16 tr|Q4FCQ7|Q4FCQ7_MOUSE Arginine tRNA protein transferase OS=Mus ... 89 2e-16 tr|Q4FCQ6|Q4FCQ6_MOUSE Arginine tRNA protein transferase OS=Mus ... 89 2e-16 tr|Q3UUL7|Q3UUL7_MOUSE Putative uncharacterized protein (Fragmen... 89 2e-16 tr|Q4S2G1|Q4S2G1_TETNG Chromosome 17 SCAF14762, whole genome sho... 88 3e-16 tr|Q7QDR4|Q7QDR4_ANOGA AGAP010373-PA OS=Anopheles gambiae GN=AGA... 88 4e-16 tr|Q5RB46|Q5RB46_PONAB Putative uncharacterized protein DKFZp469... 87 6e-16 tr|Q5SQQ2|Q5SQQ2_HUMAN Arginyltransferase 1 (Fragment) OS=Homo s... 87 6e-16 tr|Q5SQQ1|Q5SQQ1_HUMAN Arginyltransferase 1 (Fragment) OS=Homo s... 87 6e-16 tr|B4DR48|B4DR48_HUMAN cDNA FLJ56138, highly similar to Homo sap... 87 6e-16 tr|A4IFW7|A4IFW7_DANRE Zgc:158849 protein OS=Danio rerio GN=zgc:... 86 1e-15 tr|B3S882|B3S882_TRIAD Putative uncharacterized protein OS=Trich... 86 2e-15 tr|Q8CFP7|Q8CFP7_MOUSE Arginyltransferase 1 OS=Mus musculus GN=A... 86 2e-15 tr|Q80YP1|Q80YP1_MOUSE Ate1 protein OS=Mus musculus GN=Ate1 PE=2... 86 2e-15 tr|B6P9B9|B6P9B9_BRAFL Putative uncharacterized protein OS=Branc... 86 2e-15
>tr|A9TV97|A9TV97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198612 PE=4 SV=1 Length = 660
Score = 123 bits (308), Expect = 9e-27 Identities = 52/97 (53%), Positives = 72/97 (74%) Frame = +2
Query: 245 LTVVEDQGLYANPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELE 424 +++VEDQG+Y++ CGYCKS +S + G+WAH+L+ DYQELL++ WRRSG LY+P + Sbjct: 1 MSIVEDQGVYSSSCGYCKSSSRSSVSQGMWAHTLTVDDYQELLNRGWRRSGKFLYKPSMH 60
Query: 425 RSCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYLDGVY 535 R+CCP ++IRL A S + R MRRMQRYL+G Y Sbjct: 61 RTCCPPHSIRLDANAFIISKDQARVMRRMQRYLEGSY 97
>tr|A7Q3F3|A7Q3F3_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029267001 PE=4 SV=1 Length = 540
Score = 120 bits (302), Expect = 5e-26 Identities = 54/97 (55%), Positives = 70/97 (72%) Frame = +2
Query: 248 TVVEDQGLYANPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELER 427 +VV D G + CGYC+S TS +HGLWAHS++ DYQ+LLD+ WRRSG LY+PE+ER Sbjct: 24 SVVVDVGRRRSTCGYCRSGARTSISHGLWAHSITVDDYQDLLDRGWRRSGSFLYKPEMER 83
Query: 428 SCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYLDGVYS 538 +CCP+YTIRL+A S E +R +RMQR+ DG S Sbjct: 84 TCCPSYTIRLRADDFVPSKEQLRVSKRMQRFQDGTLS 120
>tr|Q688J5|Q688J5_ORYSJ Os05g0446800 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0012G21.2 PE=2 SV=1 Length = 644
Score = 119 bits (298), Expect = 1e-25 Identities = 55/94 (58%), Positives = 67/94 (71%) Frame = +2
Query: 248 TVVEDQGLYANPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELER 427 +VV D G CGYC+S G TS +HGLWA+SL DYQ LLD+ WRRSG LY+PE+ER Sbjct: 24 SVVIDYGRRRTACGYCRSTGQTSISHGLWANSLRADDYQALLDRGWRRSGCFLYKPEMER 83
Query: 428 SCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYLDG 529 +CCP YTIRLKA S E R +++MQR+LDG Sbjct: 84 TCCPQYTIRLKANDFICSKEQGRVLKKMQRFLDG 117
>tr|B8AYR5|B8AYR5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20147 PE=4 SV=1 Length = 644
Score = 119 bits (298), Expect = 1e-25 Identities = 55/94 (58%), Positives = 67/94 (71%) Frame = +2
Query: 248 TVVEDQGLYANPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELER 427 +VV D G CGYC+S G TS +HGLWA+SL DYQ LLD+ WRRSG LY+PE+ER Sbjct: 24 SVVIDYGRRRTACGYCRSTGQTSISHGLWANSLRADDYQALLDRGWRRSGCFLYKPEMER 83
Query: 428 SCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYLDG 529 +CCP YTIRLKA S E R +++MQR+LDG Sbjct: 84 TCCPQYTIRLKANDFICSKEQGRVLKKMQRFLDG 117
>tr|Q9C776|Q9C776_ARATH Arginine-tRNA-protein transferase, putative; 58258-55831 (Putative arginine-tRNA-protein transferase) OS=Arabidopsis thaliana GN=At3g11240 PE=2 SV=1 Length = 605
Score = 112 bits (280), Expect = 2e-23 Identities = 52/107 (48%), Positives = 68/107 (63%) Frame = +2
Query: 248 TVVEDQGLYANPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELER 427 ++V D G + CGYCKS S +HGLW L+ DYQ LLD WRRSG LY+PE+E+ Sbjct: 23 SIVADCGRNKSTCGYCKSSTRFSISHGLWTERLTVNDYQALLDSGWRRSGCYLYKPEMEK 82
Query: 428 SCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYLDGVYSSPSSGRKETE 568 +CCP+YTIRLKA S E R RR++R+LDG + S + E + Sbjct: 83 TCCPSYTIRLKASDFVPSKEQQRVRRRIERFLDGELDAKPSEQTEDQ 129
>tr|Q682K5|Q682K5_ARATH Arginine-tRNA-protein transferase 1 homolog OS=Arabidopsis thaliana GN=At5g05700 PE=2 SV=1 Length = 632
Score = 108 bits (270), Expect = 2e-22 Identities = 47/94 (50%), Positives = 66/94 (70%) Frame = +2
Query: 248 TVVEDQGLYANPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELER 427 +V++D G + CGYCKS +S +HGL A +L+ YDYQ L+D+ WRRSG LY+ E+++ Sbjct: 19 SVIDDHGRRKSTCGYCKSPARSSISHGLSAQTLTVYDYQALIDRGWRRSGTYLYKHEMDK 78
Query: 428 SCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYLDG 529 +CCP YTIRLKA + E R RR++R+LDG Sbjct: 79 TCCPPYTIRLKASDFVPTKEQQRVSRRLERFLDG 112
>tr|Q67YK9|Q67YK9_ARATH Arginine-tRNA-protein transferase 1 homolog OS=Arabidopsis thaliana GN=At5g05700 PE=2 SV=1 Length = 632
Score = 108 bits (270), Expect = 2e-22 Identities = 47/94 (50%), Positives = 66/94 (70%) Frame = +2
Query: 248 TVVEDQGLYANPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELER 427 +V++D G + CGYCKS +S +HGL A +L+ YDYQ L+D+ WRRSG LY+ E+++ Sbjct: 19 SVIDDHGRRKSTCGYCKSPARSSISHGLSAQTLTVYDYQALIDRGWRRSGTYLYKHEMDK 78
Query: 428 SCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYLDG 529 +CCP YTIRLKA + E R RR++R+LDG Sbjct: 79 TCCPPYTIRLKASDFVPTKEQQRVSRRLERFLDG 112
>tr|Q56ZQ7|Q56ZQ7_ARATH At5g05700 OS=Arabidopsis thaliana GN=At5g05700 PE=2 SV=1 Length = 632
Score = 108 bits (270), Expect = 2e-22 Identities = 47/94 (50%), Positives = 66/94 (70%) Frame = +2
Query: 248 TVVEDQGLYANPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELER 427 +V++D G + CGYCKS +S +HGL A +L+ YDYQ L+D+ WRRSG LY+ E+++ Sbjct: 19 SVIDDHGRRKSTCGYCKSPARSSISHGLSAQTLTVYDYQALIDRGWRRSGTYLYKHEMDK 78
Query: 428 SCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYLDG 529 +CCP YTIRLKA + E R RR++R+LDG Sbjct: 79 TCCPPYTIRLKASDFVPTKEQQRVSRRLERFLDG 112
>tr|Q6INP2|Q6INP2_XENLA MGC81517 protein OS=Xenopus laevis GN=MGC81517 PE=2 SV=1 Length = 499
Score = 98.2 bits (243), Expect = 3e-19 Identities = 43/104 (41%), Positives = 69/104 (66%) Frame = +2
Query: 278 NPCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELERSCCPAYTIRL 457 N CGYCKS+ +S +HG+WAH+L+ DYQ+L+D+ WRRSG +Y+P + ++CCP YTIRL Sbjct: 21 NRCGYCKSEA-SSMSHGMWAHTLTVQDYQDLIDRGWRRSGKYVYKPLMNQTCCPQYTIRL 79
Query: 458 KAGCMEKSSEHVRAMRRMQRYLDGVYSSPSSGRKETELAEEVMD 589 A + + H + ++++ +YL ++ S K+ + E MD Sbjct: 80 SASNFQPTKSHKKVLKKVLKYL---HAGEVSHSKDEGTSGEPMD 120
>tr|Q178G8|Q178G8_AEDAE Arginyltransferase, putative OS=Aedes aegypti GN=AAEL005885 PE=4 SV=1 Length = 495
Score = 91.7 bits (226), Expect = 3e-17 Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 2/107 (1%) Frame = +2
Query: 248 TVVEDQGLYAN-PCGYCKSQGPTSFAHGLWAHSLSPYDYQELLDQNWRRSGMVLYRPELE 424 T+V+ G ++ CGYCK Q + +HG+WAH+++ DYQ+L+D+ WRRSG Y+PE+ Sbjct: 3 TIVDFYGKQSDYSCGYCK-QPSSCQSHGMWAHTMTCQDYQDLIDRGWRRSGCYCYKPEMN 61
Query: 425 RSCCPAYTIRLKAGCMEKSSEHVRAMRRMQRYL-DGVYSSPSSGRKE 562 +CCP+YTI+ A S H + ++R+ ++L DG+ G ++ Sbjct: 62 TTCCPSYTIKCDAMSFRLSKSHKKIIKRINKFLKDGIKGKDDGGAED 108
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