DK953058 |
Clone id |
TST38A01NGRL0015_M06 |
Library |
TST38 |
Length |
632 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_M06. 5' end sequence. |
Accession |
DK953058 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1940Contig1 |
Sequence |
CGTCGATATTTGGACAAATCAACTGTGCACCACAATGGTGTGTCAAATGTGGAGCATAGG ATATTCAAGAATCCTAACATACATGATAGTTTCTTGGGTACAGGGGATTACGACGGACTT GCGCAAGTTGGACCCTTTGGCTTAGGATTTCGTAGGTATAGTCAAGTTGCAAGTGGTTCT CCACAGTATTTTGCCTTTGGCCATTCTGGAGTTGGGGGCTCTACCGCCTTCTGTTATCCA GGACACAATTTTGCCTTGGCCATCACAGTTAACAAGATGTCGCGCGGTGGTGTAACTGCT ACGATTATTAAATTTATATGCTCAGAGTTGAATTTACCATGTCCGGAAGAGTATTTGGAT CATGGTGGAATGGGACCTGACATGAAATTGGACATGAGTACCTTAAATACAAATGTCACA CATTAGGCCATTGAATTTTCTCACCCCTGCAAGCCTTCATTCTTTTGGATGCCCAGGAAT GGGGCAATCCAGCTTTCTTGTTTGTAAGTTATCATATCTTATATATGTATCGATAGCTTT GTAAAAGCTGTTGAGATTATGAATGTAAAGATGAAAGTCTGTGTAATGCAGACGAGTCAA AAGACTTGAGAAGATACGACTTGGACTTTCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0UWA6 |
Definition |
sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum |
Align length |
55 |
Score (bit) |
32.3 |
E-value |
2.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SM18 |
Definition |
tr|A9SM18|A9SM18_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
111 |
Score (bit) |
125.0 |
E-value |
3.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953058|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_M06, 5' (632 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SM18|A9SM18_PHYPA Predicted protein OS=Physcomitrella paten... 125 3e-27 tr|A9SIA0|A9SIA0_PHYPA Predicted protein OS=Physcomitrella paten... 123 8e-27 tr|Q93YN5|Q93YN5_ARATH Putative uncharacterized protein AT5g2481... 116 1e-24 tr|A7P510|A7P510_VITVI Chromosome chr4 scaffold_6, whole genome ... 113 8e-24 tr|B8B250|B8B250_ORYSI Putative uncharacterized protein OS=Oryza... 108 3e-22 tr|A3BF43|A3BF43_ORYSJ Putative uncharacterized protein OS=Oryza... 108 3e-22 tr|B6THE4|B6THE4_MAIZE Putative uncharacterized protein OS=Zea m... 100 9e-20 tr|Q4N5D9|Q4N5D9_THEPA ABC1 protein, putative OS=Theileria parva... 47 0.001 tr|Q4UE53|Q4UE53_THEAN ABC1-related protein, putative OS=Theiler... 44 0.011 tr|A9UTH3|A9UTH3_MONBE Predicted protein OS=Monosiga brevicollis... 42 0.040 tr|A4F8E6|A4F8E6_SACEN Carboxylesterase OS=Saccharopolyspora ery... 40 0.089 tr|Q1MW87|Q1MW87_9ACTO Putative uncharacterized protein OS=Strep... 39 0.20 tr|B4D4G1|B4D4G1_9BACT Beta-lactamase OS=Chthoniobacter flavus E... 37 0.76 tr|A3VRD4|A3VRD4_9PROT Esterase A OS=Parvularcula bermudensis HT... 37 0.76 tr|Q5YYB8|Q5YYB8_NOCFA Putative esterase OS=Nocardia farcinica G... 37 0.99 tr|B6KGS5|B6KGS5_TOXGO ABC1 family beta-lactamase, putative OS=T... 37 0.99 tr|B5HBF9|B5HBF9_STRPR Esterase OS=Streptomyces pristinaespirali... 37 1.3 tr|A7CQJ3|A7CQJ3_9BACT Beta-lactamase OS=Opitutaceae bacterium T... 37 1.3 tr|Q94AD6|Q94AD6_ARATH AT5g24810/F6A4_20 OS=Arabidopsis thaliana... 37 1.3 tr|B0T1Y0|B0T1Y0_CAUSK Beta-lactamase OS=Caulobacter sp. (strain... 36 1.7 tr|A4ZY19|A4ZY19_9NOCA Probable penicillin-binding protein OS=Rh... 36 1.7 tr|Q5CH39|Q5CH39_CRYHO Putative uncharacterized protein OS=Crypt... 35 2.9 tr|Q9ABH2|Q9ABH2_CAUCR Esterase A OS=Caulobacter crescentus GN=C... 35 3.7 tr|B2ULQ7|B2ULQ7_AKKM8 Beta-lactamase OS=Akkermansia muciniphila... 35 3.7 tr|B8GYC5|B8GYC5_CAUCR Esterase OS=Caulobacter crescentus NA1000... 35 3.7 tr|B7RRB1|B7RRB1_9RHOB Type VI secretion protein IcmF OS=Roseoba... 35 3.7 tr|B7LSD8|B7LSD8_ESCFE Auf fimbriae major fimbrial subunit AufA ... 35 3.7 tr|A0Y7L6|A0Y7L6_9GAMM Putative esterase OS=marine gamma proteob... 35 3.7 tr|Q988B4|Q988B4_RHILO Esterase OS=Rhizobium loti GN=mlr6813 PE=... 35 4.9 tr|Q0SKQ9|Q0SKQ9_RHOSR Probable penicillin-binding protein OS=Rh... 34 6.4
>tr|A9SM18|A9SM18_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165653 PE=4 SV=1 Length = 962
Score = 125 bits (313), Expect = 3e-27 Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 2/111 (1%) Frame = +1
Query: 58 RIFKNPNIHDSFLGTGDYDGLAQVGP-FGLGFRRYSQVASGSPQYFAFGHSGVGGSTAFC 234 RIF N +IHD+FL G+Y LA FGLGFRR + S + FGHSGVGGST FC Sbjct: 844 RIFLNTSIHDAFLAAGEYSKLAYTDEKFGLGFRRITSGDGSSTEVIGFGHSGVGGSTGFC 903
Query: 235 YPGHNFALAITVNKMSRGGVTATIIKFICSELNLPCPEEYLD-HGGMGPDM 384 YP HNFA+AIT+NK+S+GGVTA I + + EL LPCP Y + GPDM Sbjct: 904 YPAHNFAIAITLNKLSQGGVTAQIARLVTQELGLPCPAMYSSVNADRGPDM 954
>tr|A9SIA0|A9SIA0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_185235 PE=4 SV=1 Length = 936
Score = 123 bits (309), Expect = 8e-27 Identities = 63/111 (56%), Positives = 75/111 (67%), Gaps = 3/111 (2%) Frame = +1
Query: 61 IFKNPNIHDSFLGTGDYDGLAQVGP-FGLGFRRYSQVASG-SPQYFAFGHSGVGGSTAFC 234 I+ NP IHD+FL G+Y LA FGLGFRR + S + + FGHSGVGGST FC Sbjct: 821 IYSNPKIHDAFLAAGEYSKLAYTDEKFGLGFRRITSGGSNLAEEVIGFGHSGVGGSTGFC 880
Query: 235 YPGHNFALAITVNKMSRGGVTATIIKFICSELNLPCPEEYLDHGG-MGPDM 384 YPGHNF+LAIT+NK+S+G VTA I + + SEL LPCP Y G GPDM Sbjct: 881 YPGHNFSLAITLNKLSQGEVTAQIARLVTSELGLPCPAMYSSVGADRGPDM 931
>tr|Q93YN5|Q93YN5_ARATH Putative uncharacterized protein AT5g24810;F6A4.20 (At5g24810/F6A4.20) OS=Arabidopsis thaliana GN=AT5g24810;F6A4.20 PE=2 SV=1 Length = 1009
Score = 116 bits (291), Expect = 1e-24 Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 1/119 (0%) Frame = +1
Query: 55 HRIFKNPNIHDSFLGTGDYDGLAQV-GPFGLGFRRYSQVASGSPQYFAFGHSGVGGSTAF 231 H +F NP IHD+F+G GDY GL G FGLGF+R S FGHSG+GGST F Sbjct: 896 HNMFSNPRIHDAFMGAGDYSGLVVPDGKFGLGFKR---AISQDGSLVGFGHSGLGGSTGF 952
Query: 232 CYPGHNFALAITVNKMSRGGVTATIIKFICSELNLPCPEEYLDHGGMGPDMKLDMSTLN 408 C + F++A+T+NKMS GGVTA I+K +CSELN+P P+++ +G D ++ +N Sbjct: 953 CDINNRFSIAVTLNKMSMGGVTANIVKLVCSELNIPLPKDFAT--DIGADSQMGTPLIN 1009
>tr|A7P510|A7P510_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032357001 PE=4 SV=1 Length = 859
Score = 113 bits (283), Expect = 8e-24 Identities = 59/118 (50%), Positives = 75/118 (63%), Gaps = 1/118 (0%) Frame = +1
Query: 19 STVHHNGVSNVEHRIFKNPNIHDSFLGTGDYDGLA-QVGPFGLGFRRYSQVASGSPQYFA 195 ST + + + +IF NP IHD+FLG G+Y+ G FGLGF+ S S Sbjct: 729 STENGDDSPKSDTKIFSNPRIHDAFLGVGEYENYGFPSGKFGLGFKSCS---SKDGTLLG 785
Query: 196 FGHSGVGGSTAFCYPGHNFALAITVNKMSRGGVTATIIKFICSELNLPCPEEYLDHGG 369 FGHSG+GGST +C + FA+A+T+NKMS GGVT II+FICSELNLP PE+Y G Sbjct: 786 FGHSGMGGSTGYCDINNKFAIAVTLNKMSLGGVTGKIIQFICSELNLPVPEDYSRFSG 843
>tr|B8B250|B8B250_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24357 PE=4 SV=1 Length = 926
Score = 108 bits (270), Expect = 3e-22 Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 3/108 (2%) Frame = +1
Query: 85 DSFLGTGDYDGLAQV-GPFGLGFRRYSQVASGSPQYFA--FGHSGVGGSTAFCYPGHNFA 255 D+F+G GD+ G+ G FGLGFRRY A + FGHSG+GGST FC H A Sbjct: 816 DAFMGVGDFSGMIHPNGKFGLGFRRYGYGAGAGEKVATTTFGHSGMGGSTGFCDVEHGLA 875
Query: 256 LAITVNKMSRGGVTATIIKFICSELNLPCPEEYLDHGGMGPDMKLDMS 399 +A+TVNKMS GGVT +++ +C EL +P P+E+ G GPDM L+++ Sbjct: 876 MAVTVNKMSLGGVTRRVVRLVCEELGVPVPDEFSVAGDKGPDMVLNLA 923
>tr|A3BF43|A3BF43_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021665 PE=4 SV=1 Length = 895
Score = 108 bits (270), Expect = 3e-22 Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 3/108 (2%) Frame = +1
Query: 85 DSFLGTGDYDGLAQV-GPFGLGFRRYSQVASGSPQYFA--FGHSGVGGSTAFCYPGHNFA 255 D+F+G GD+ G+ G FGLGFRRY A + FGHSG+GGST FC H A Sbjct: 785 DAFMGVGDFSGMIHPNGKFGLGFRRYGYGAGAGEKVATTTFGHSGMGGSTGFCDVEHGLA 844
Query: 256 LAITVNKMSRGGVTATIIKFICSELNLPCPEEYLDHGGMGPDMKLDMS 399 +A+TVNKMS GGVT +++ +C EL +P P+E+ G GPDM L+++ Sbjct: 845 MAVTVNKMSLGGVTRRVVRLVCEELGVPVPDEFSVAGDKGPDMVLNLA 892
>tr|B6THE4|B6THE4_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 103
Score = 100 bits (248), Expect = 9e-20 Identities = 46/92 (50%), Positives = 62/92 (67%) Frame = +1
Query: 136 FGLGFRRYSQVASGSPQYFAFGHSGVGGSTAFCYPGHNFALAITVNKMSRGGVTATIIKF 315 +GLGFRRY +S S + FGHSG+GGST FC + FA+A+TVNK+S G VT +++ Sbjct: 5 YGLGFRRYDDASSXSGRLRCFGHSGMGGSTGFCDVENGFAIAVTVNKLSLGSVTRGVVRL 64
Query: 316 ICSELNLPCPEEYLDHGGMGPDMKLDMSTLNT 411 + EL LP P+EY G GPDM L+++T T Sbjct: 65 VLEELGLPVPDEYSATGEKGPDMMLNLTTTTT 96
>tr|Q4N5D9|Q4N5D9_THEPA ABC1 protein, putative OS=Theileria parva GN=TP02_0351 PE=4 SV=1 Length = 1264
Score = 47.0 bits (110), Expect = 0.001 Identities = 23/67 (34%), Positives = 37/67 (55%) Frame = +1
Query: 136 FGLGFRRYSQVASGSPQYFAFGHSGVGGSTAFCYPGHNFALAITVNKMSRGGVTATIIKF 315 F LGF++++ + + + Y FGHS V GS F PG N ++I V+ +R V +++F Sbjct: 1179 FSLGFQKFTFLDTDNNVYQGFGHSDVSGSVVFGVPGLNLCISIFVSNCARQHVLFKVLQF 1238
Query: 316 ICSELNL 336 I L Sbjct: 1239 ILKHYGL 1245
>tr|Q4UE53|Q4UE53_THEAN ABC1-related protein, putative OS=Theileria annulata GN=TA12685 PE=4 SV=1 Length = 1265
Score = 43.5 bits (101), Expect = 0.011 Identities = 23/67 (34%), Positives = 35/67 (52%) Frame = +1
Query: 136 FGLGFRRYSQVASGSPQYFAFGHSGVGGSTAFCYPGHNFALAITVNKMSRGGVTATIIKF 315 F LGF++++ + + Y FGHS V GS F P N + I V+ SR V +++F Sbjct: 1180 FSLGFQKFTFLDVNNNFYQGFGHSDVSGSVVFGIPVLNLCICIFVSHCSRHHVLIKVLQF 1239
Query: 316 ICSELNL 336 I + L Sbjct: 1240 ILAHYGL 1246
>tr|A9UTH3|A9UTH3_MONBE Predicted protein OS=Monosiga brevicollis GN=36162 PE=4 SV=1 Length = 557
Score = 41.6 bits (96), Expect = 0.040 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%) Frame = +1
Query: 136 FGLGFRRYS-QVASGSPQYFAFGHSGVGGSTAFCYPGHNFALAITVNKMS 282 +GLGF++Y+ Q+ +G FGH G+GGS F P ++A++VN+++ Sbjct: 483 WGLGFQKYTRQLPNGKQVDGPFGHLGLGGSVGFADPTCELSMAVSVNRLA 532
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