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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952754
Clone id TST38A01NGRL0014_P10
Library
Length 631
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_P10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CCCATCGAGACGAAGGCTTGGGGCTCTTATGCCGGTGCCTTCTTCGAAGCTCCTTGTGTT
AGGCCTCTGCATAATGCCAGCCGAGAAGGTTTCCGTGGCCGCAGAATCCCATCACCAACT
TTATTTCTCTGCCCTTATCGTCGCAAGGATGGCTTATCAACAGTAGCTTACACGCAGGAA
ATCCTCACAGATGCGGCTGAATGCATCCTCTTCGATGAAGAGGATCCAGTCAAGGAAGGC
CCTGGAGCAGAAGGATGGAATGCAGATGTATACAAGGAAGAAAATGGTCTGCAGGCTCGA
TCGCCTCTTTTTTCTGTTACAGATGTACACAAGCATGATGATGATGATGTGCTGCACGCA
GACTCCCTCACAACTGATATGCGGGACACCACAGCCACTGCACCTCGAGAAATATATCTG
CGGCTTGATGCCCTTGACTTGCAGAGAGATTATCGGGGCCACTCTTTACGTCCCCTACTG
GATGTTGACACACTCCCTCAGCCATCCCGTTCAAAGCCAGGAAAGAGACAAAATGTGCCG
AAGAAAGCTAGGCAATTGATTTTGAGTCTGCGTGACTTGCCTGTGGAGGAATTTCCCGCA
GCTCTCAACAAGTTCAAATCGTTTGGACCTG
■■Homology search results ■■ -
sp_hit_id Q8IUH8
Definition sp|Q8IUH8|IMP5_HUMAN Signal peptide peptidase-like 2C OS=Homo sapiens
Align length 79
Score (bit) 32.7
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952754|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P10, 5'
         (631 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8IUH8|IMP5_HUMAN Signal peptide peptidase-like 2C OS=Homo sa...    33   1.6  
sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (st...    33   1.6  
sp|P40345|PDAT_YEAST Phospholipid:diacylglycerol acyltransferase...    32   2.7  
sp|O94680|PDAT_SCHPO Phospholipid:diacylglycerol acyltransferase...    31   4.6  
sp|Q3A9J4|GRDB_CARHZ Glycine reductase complex component B subun...    31   4.6  
sp|Q03FW3|TRMD_PEDPA tRNA (guanine-N(1)-)-methyltransferase OS=P...    31   6.1  
sp|Q95JY0|CC067_MACFA Uncharacterized protein C3orf67 homolog OS...    31   6.1  

>sp|Q8IUH8|IMP5_HUMAN Signal peptide peptidase-like 2C OS=Homo
           sapiens GN=SPPL2C PE=1 SV=2
          Length = 684

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 19/79 (24%), Positives = 35/79 (44%)
 Frame = -2

Query: 396 GCGVPHISCEGVCVQHIIIIMLVYICNRKKRRSSLQTIFFLVYICIPSFCSRAFLDWILF 217
           G G+   SC    V H+ +         ++   SL     L  + + S C+   + W+ +
Sbjct: 288 GAGIGLYSCLSPLVCHLSLRQY------QRPPHSLWASLPLPLLLLASLCATVIIFWVAY 341

Query: 216 IEEDAFSRICEDFLRVSYC 160
             ED ++ + +D L +SYC
Sbjct: 342 RNEDRWAWLLQDTLGISYC 360


>sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp.
           (strain PCC 6803) GN=icfA PE=3 SV=1
          Length = 274

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 421 RLDALDLQRDYRGHSLRPLLDVDTLPQPSRSKPGKRQNVPKKARQL 558
           R++AL+ + +Y  H   PL+  D    P + +PG+ +     A QL
Sbjct: 207 RINALEPEDEYAPHPNSPLISYDAFKVPGKERPGREKATESPAPQL 252


>sp|P40345|PDAT_YEAST Phospholipid:diacylglycerol acyltransferase
           OS=Saccharomyces cerevisiae GN=LRO1 PE=1 SV=1
          Length = 661

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 12/69 (17%)
 Frame = -1

Query: 544 SSAHFV-----SFLALNGMA-EGVC--QHPVGDVKSGPD----NLSASQGHQAADIFLEV 401
           SSAHF      SF  L  M  + VC  +H + D ++G D     L A+QG ++ D F+  
Sbjct: 199 SSAHFRKRLWGSFYMLRTMVMDKVCWLKHVMLDPETGLDPPNFTLRAAQGFESTDYFIAG 258

Query: 400 QWLWCPAYQ 374
            W+W   +Q
Sbjct: 259 YWIWNKVFQ 267


>sp|O94680|PDAT_SCHPO Phospholipid:diacylglycerol acyltransferase
           OS=Schizosaccharomyces pombe GN=plh1 PE=1 SV=1
          Length = 623

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -1

Query: 487 QHPVGDVKSGPD----NLSASQGHQAADIFLEVQWLW 389
           +H + D K+G D     L A+QG +AAD F+   W+W
Sbjct: 195 EHLMLDKKTGLDPKGIKLRAAQGFEAADFFITGYWIW 231


>sp|Q3A9J4|GRDB_CARHZ Glycine reductase complex component B subunit
           gamma OS=Carboxydothermus hydrogenoformans (strain
           Z-2901 / DSM 6008) GN=grdB PE=3 SV=2
          Length = 435

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
 Frame = +2

Query: 380 CGTPQPLHLEK------YICGLMPLTCREIIGATLYVPYWMLTHSLSHPVQSQERDKMCR 541
           CG      +E+      ++C ++P++  + +GA   VP   + H L +P    + +K  R
Sbjct: 356 CGAAMVKEIERAGIPVVHMCTIVPIS--KTVGANRIVPTVAIPHPLGNPALPADEEKALR 413

Query: 542 RKL 550
           RKL
Sbjct: 414 RKL 416


>sp|Q03FW3|TRMD_PEDPA tRNA (guanine-N(1)-)-methyltransferase
           OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
           GN=trmD PE=3 SV=1
          Length = 245

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -2

Query: 108 DSAATETFSAGIMQRPNTRSFEEGTGIRAPSLRLDG 1
           DSA  ++FS G+++ P     E+  G++ PS+ L G
Sbjct: 164 DSAVDDSFSTGLLEFPQYTRPEDFRGLKVPSILLSG 199


>sp|Q95JY0|CC067_MACFA Uncharacterized protein C3orf67 homolog
           OS=Macaca fascicularis GN=QtsA-12457 PE=2 SV=1
          Length = 689

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 484 VDTLPQPSRSKPGKRQNVPKKARQLILSLRDLPVEEFPAALNK 612
           + +LP    S  G+R    +K    ++  +DLP ++ PA+LNK
Sbjct: 472 MSSLPTTCFSPTGRRCGSCQKTPDPVIKAKDLPAQQVPASLNK 514
tr_hit_id Q6PYY6
Definition tr|Q6PYY6|Q6PYY6_OSTTA GBSSI (ISS) OS=Ostreococcus tauri
Align length 89
Score (bit) 36.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952754|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P10, 5'
         (631 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6PYY6|Q6PYY6_OSTTA GBSSI (ISS) OS=Ostreococcus tauri GN=gbss...    36   1.7  
tr|A4RZ22|A4RZ22_OSTLU Predicted protein OS=Ostreococcus lucimar...    36   2.2  
tr|B5Y746|B5Y746_COPPD Glycine reductase complex component B sub...    35   4.9  
tr|A4RET5|A4RET5_MAGGR Putative uncharacterized protein OS=Magna...    34   6.4  
tr|Q4XYK7|Q4XYK7_PLACH Putative uncharacterized protein (Fragmen...    34   8.3  
tr|Q9HR74|Q9HR74_HALSA Dimethylsulfoxide reductase OS=Halobacter...    34   8.3  
tr|B0R488|B0R488_HALS3 Dimethylsulfoxide reductase subunit A (Re...    34   8.3  

>tr|Q6PYY6|Q6PYY6_OSTTA GBSSI (ISS) OS=Ostreococcus tauri GN=gbssI
           PE=4 SV=1
          Length = 574

 Score = 36.2 bits (82), Expect = 1.7
 Identities = 28/89 (31%), Positives = 40/89 (44%)
 Frame = +1

Query: 31  AGAFFEAPCVRPLHNASREGFRGRRIPSPTLFLCPYRRKDGLSTVAYTQEILTDAAECIL 210
           AG F +A C   +HN +   F+GR  P P         K GL   A       D    + 
Sbjct: 198 AGMFAKAKCAMTIHNIA---FQGRFFPQP-------MSKYGLPEDAADDFFFEDGYSKV- 246

Query: 211 FDEEDPVKEGPGAEGWNADVYKEENGLQA 297
           +DE  P KE  G E ++  +Y++ N L+A
Sbjct: 247 YDENTPAKE-QGKEDFDGKIYRKVNWLKA 274


>tr|A4RZ22|A4RZ22_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_49880 PE=4 SV=1
          Length = 546

 Score = 35.8 bits (81), Expect = 2.2
 Identities = 25/89 (28%), Positives = 42/89 (47%)
 Frame = +1

Query: 31  AGAFFEAPCVRPLHNASREGFRGRRIPSPTLFLCPYRRKDGLSTVAYTQEILTDAAECIL 210
           AG F +A C   +HN +   F+GR  P P   +  Y   D  +      +   +     +
Sbjct: 170 AGQFTKAKCAMTIHNIA---FQGRFFPQP---MATYGLPDSAA-----DDFFFEDGYSKV 218

Query: 211 FDEEDPVKEGPGAEGWNADVYKEENGLQA 297
           +DE +P KE  G E ++  +Y++ N L+A
Sbjct: 219 YDETNPAKE-DGKEEFDGKIYRKANWLKA 246


>tr|B5Y746|B5Y746_COPPD Glycine reductase complex component B
           subunit gamma (Selenoprotein PB gamma)
           OS=Coprothermobacter proteolyticus (strain ATCC 35245 /
           DSM 5265 / BT) GN=COPRO5265_0224 PE=4 SV=1
          Length = 435

 Score = 34.7 bits (78), Expect = 4.9
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
 Frame = +2

Query: 380 CGTPQPLHLEK------YICGLMPLTCREIIGATLYVPYWMLTHSLSHPVQSQERDKMCR 541
           CG      LE+      +IC ++P++  + +GA   VP   + H L +P  S+E +K  R
Sbjct: 354 CGATMVKELERAGLPTVHICTIVPIS--KTVGANRIVPAVAIPHPLGNPELSKEDEKALR 411

Query: 542 RKL 550
           RK+
Sbjct: 412 RKI 414


>tr|A4RET5|A4RET5_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_00572 PE=3 SV=1
          Length = 548

 Score = 34.3 bits (77), Expect = 6.4
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +2

Query: 404 LEKYICGLMPLTCREIIGATLYVPYWML---THSLSHPVQSQERDKMCRRKLGN 556
           +  +I  L P T + IIG  L V  W L    H +  PV ++  + M R+  GN
Sbjct: 226 MNSFILSLFPKTLQPIIGRALAVQNWRLYKKAHKILEPVINERLEMMARKDAGN 279


>tr|Q4XYK7|Q4XYK7_PLACH Putative uncharacterized protein (Fragment)
           OS=Plasmodium chabaudi GN=PC000695.02.0 PE=4 SV=1
          Length = 615

 Score = 33.9 bits (76), Expect = 8.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 333 LVYICNRKKRRSSLQTIFFLVYICIPSFCSRAFLDWILFIEEDAFSRI 190
           + YIC+R      L++  FL+ +    FC    L W+ +I+E+  SRI
Sbjct: 189 VTYICDRNNLIEFLESFLFLILVTAGCFC----LAWVHYIKENRISRI 232


>tr|Q9HR74|Q9HR74_HALSA Dimethylsulfoxide reductase OS=Halobacterium
           salinarium GN=dmsA PE=4 SV=1
          Length = 837

 Score = 33.9 bits (76), Expect = 8.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 148 DGLSTVAYTQEILTDAAECILFDEEDPVKEGP 243
           D   TVAYT E  T++    ++D++ PV+EGP
Sbjct: 633 DETPTVAYTDEFGTESGRITVYDDDAPVEEGP 664


>tr|B0R488|B0R488_HALS3 Dimethylsulfoxide reductase subunit A
           (Reductase subunit) OS=Halobacterium salinarum (strain
           ATCC 29341 / DSM 671 / R1) GN=dmsA PE=4 SV=1
          Length = 837

 Score = 33.9 bits (76), Expect = 8.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 148 DGLSTVAYTQEILTDAAECILFDEEDPVKEGP 243
           D   TVAYT E  T++    ++D++ PV+EGP
Sbjct: 633 DETPTVAYTDEFGTESGRITVYDDDAPVEEGP 664