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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952672
Clone id TST38A01NGRL0014_L18
Library
Length 579
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_L18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CTTCAAAGCTCAGCTTTAAAGTTATGTCCGTATTCTACCCATTGAACTCACAGATCAACT
CTTTGATTATGTGCAAATATAGTTGATCATCCTCTTATAAGGAGGTGTACCATACAACAT
GGCAGTGTAAGCAACACTGGCCTTTTCTACTTTTTGACACTGCACATAGCCTATCCTTTT
CTGTTTCCCCCATGTTTCTGTTTTGGAGATGATGCTAACGAAAGGCGGTTGCAATCAAGT
TTGTCACTACTTGCTGGAGTGATGTGAGAGGGTGAGGCCAGAGGGGTCTAATGTTACTGA
GGGATATGGCTTTCATGCCTTCGGAGAGCTGCTGATGTGAACAAGGAAAGGAGGCCAGCA
TGGGGCAGGCAGCAGCAGGAGCAGAAGCACAGAGGCAGGGGGAGTTTTCTTGTGTTAGTG
AGCATGCAGAGGCCTGCATACATATGGAGAATGAGGTCCGCCACCCCCTTCCGAGGCCCT
TGAAGAGATCGGTCTCTAGCGCTACGCTCAATGAAACATCCCAAATTGCTATGATCGGTG
TGCAGCGATCCCATATCGAGAGCCTTGACTATGACACTC
■■Homology search results ■■ -
sp_hit_id P60300
Definition sp|P60300|CLCG_ARATH Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana
Align length 33
Score (bit) 31.6
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952672|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_L18, 5'
         (579 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P60300|CLCG_ARATH Putative chloride channel-like protein CLC-...    32   3.0  
sp|P42893|ECE1_RAT Endothelin-converting enzyme 1 OS=Rattus norv...    31   3.9  
sp|P42892|ECE1_HUMAN Endothelin-converting enzyme 1 OS=Homo sapi...    31   3.9  
sp|P42891|ECE1_BOVIN Endothelin-converting enzyme 1 OS=Bos tauru...    31   3.9  
sp|Q4PZA2|ECE1_MOUSE Endothelin-converting enzyme 1 OS=Mus muscu...    31   5.1  
sp|P97739|ECE1_CAVPO Endothelin-converting enzyme 1 OS=Cavia por...    31   5.1  
sp|Q29DJ1|NKD_DROPS Protein naked cuticle OS=Drosophila pseudoob...    30   6.7  

>sp|P60300|CLCG_ARATH Putative chloride channel-like protein CLC-g
           OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1
          Length = 763

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +3

Query: 477 PLKRSVSSATLNETSQIAMIGVQRSHIESLDYD 575
           PL  S+  AT N TSQ+A++G     IESLDY+
Sbjct: 13  PLLPSLRRAT-NSTSQVAIVGANVCPIESLDYE 44


>sp|P42893|ECE1_RAT Endothelin-converting enzyme 1 OS=Rattus
           norvegicus GN=Ece1 PE=2 SV=2
          Length = 762

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 105 VYHTTWQCKQHWPFLLFDTAHSLSFSVSPMFL 200
           +Y T   C   W F + DT ++L F++ PMF+
Sbjct: 413 MYGTKKTCLPRWKFCVSDTENNLGFALGPMFV 444


>sp|P42892|ECE1_HUMAN Endothelin-converting enzyme 1 OS=Homo sapiens
           GN=ECE1 PE=1 SV=2
          Length = 770

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 105 VYHTTWQCKQHWPFLLFDTAHSLSFSVSPMFL 200
           +Y T   C   W F + DT ++L F++ PMF+
Sbjct: 421 MYGTKKTCLPRWKFCVSDTENNLGFALGPMFV 452


>sp|P42891|ECE1_BOVIN Endothelin-converting enzyme 1 OS=Bos taurus
           GN=ECE1 PE=1 SV=2
          Length = 754

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 105 VYHTTWQCKQHWPFLLFDTAHSLSFSVSPMFL 200
           +Y T   C   W F + DT ++L F++ PMF+
Sbjct: 405 MYGTKKTCLPRWKFCVSDTENTLGFALGPMFV 436


>sp|Q4PZA2|ECE1_MOUSE Endothelin-converting enzyme 1 OS=Mus musculus
           GN=Ece1 PE=2 SV=1
          Length = 769

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 105 VYHTTWQCKQHWPFLLFDTAHSLSFSVSPMFL 200
           +Y T   C   W F + DT ++L F++ PMF+
Sbjct: 420 MYGTKKTCIPRWKFCVSDTENNLGFALGPMFV 451


>sp|P97739|ECE1_CAVPO Endothelin-converting enzyme 1 OS=Cavia
           porcellus GN=ECE1 PE=2 SV=1
          Length = 754

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 105 VYHTTWQCKQHWPFLLFDTAHSLSFSVSPMFL 200
           +Y T   C   W F + DT ++L F + PMF+
Sbjct: 405 MYGTKKTCLPRWKFCVSDTENNLGFGLGPMFV 436


>sp|Q29DJ1|NKD_DROPS Protein naked cuticle OS=Drosophila
           pseudoobscura pseudoobscura GN=nkd PE=3 SV=2
          Length = 1009

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = +1

Query: 331 ADVNKERRPAWGRQQQEQKHR-GRGSFL-VLVSMQRPAYIWRMRSATPFRGP*RDRSLAL 504
           A+V+  R+PA  +QQQ+Q+ R   GS +  L++   PA      S +P   P    SL+L
Sbjct: 618 ANVSPIRQPAAQQQQQQQRQRSSTGSKIPTLIANHSPAAPQSPLSCSP---PPCTLSLSL 674

Query: 505 RSMKHPKLL*SVCSDPI 555
            S  HP    + CS P+
Sbjct: 675 SSSNHPAA--ATCSIPV 689
tr_hit_id Q6ZDC2
Definition tr|Q6ZDC2|Q6ZDC2_ORYSJ cDNA clone:J013064L19, full insert sequence OS=Oryza sativa subsp. japonica
Align length 56
Score (bit) 38.5
E-value 0.27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952672|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_L18, 5'
         (579 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6ZDC2|Q6ZDC2_ORYSJ cDNA clone:J013064L19, full insert sequen...    39   0.27 
tr|A2YTR4|A2YTR4_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.27 
tr|A2XTU8|A2XTU8_ORYSI Putative uncharacterized protein OS=Oryza...    36   1.8  
tr|Q8LPA2|Q8LPA2_ORYSJ Chloride channel OS=Oryza sativa subsp. j...    34   5.1  
tr|B8AUE4|B8AUE4_ORYSI Putative uncharacterized protein OS=Oryza...    34   5.1  
tr|A3ASP0|A3ASP0_ORYSJ Putative uncharacterized protein OS=Oryza...    34   5.1  

>tr|Q6ZDC2|Q6ZDC2_ORYSJ cDNA clone:J013064L19, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0045D08.120 PE=2
           SV=1
          Length = 796

 Score = 38.5 bits (88), Expect = 0.27
 Identities = 25/56 (44%), Positives = 32/56 (57%)
 Frame = +3

Query: 408 SCVSEHAEACIHMENEVRHPLPRPLKRSVSSATLNETSQIAMIGVQRSHIESLDYD 575
           +C +   E  +  E+E R PL R L     SAT N TSQ+AM+G     IESLDY+
Sbjct: 2   ACTAPREEDLLMEEDEHRPPLNRALLHR--SAT-NNTSQVAMVGSNPCPIESLDYE 54


>tr|A2YTR4|A2YTR4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28712 PE=4 SV=1
          Length = 796

 Score = 38.5 bits (88), Expect = 0.27
 Identities = 25/56 (44%), Positives = 32/56 (57%)
 Frame = +3

Query: 408 SCVSEHAEACIHMENEVRHPLPRPLKRSVSSATLNETSQIAMIGVQRSHIESLDYD 575
           +C +   E  +  E+E R PL R L     SAT N TSQ+AM+G     IESLDY+
Sbjct: 2   ACTAPREEDLLMEEDEHRPPLNRALLHR--SAT-NNTSQVAMVGSNPCPIESLDYE 54


>tr|A2XTU8|A2XTU8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16029 PE=4 SV=1
          Length = 803

 Score = 35.8 bits (81), Expect = 1.8
 Identities = 21/52 (40%), Positives = 30/52 (57%)
 Frame = +3

Query: 420 EHAEACIHMENEVRHPLPRPLKRSVSSATLNETSQIAMIGVQRSHIESLDYD 575
           E +EA +  ++E      +PL R     T+N TSQIA++G     IESLDY+
Sbjct: 45  ESSEALLRYDDEAGGGPRQPLLRK---RTMNTTSQIAIVGANVCPIESLDYE 93


>tr|Q8LPA2|Q8LPA2_ORYSJ Chloride channel OS=Oryza sativa subsp.
           japonica GN=OsCLC-1 PE=2 SV=1
          Length = 801

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +3

Query: 420 EHAEACIHMENEVRHPLPRPLKRSVSSATLNETSQIAMIGVQRSHIESLDYD 575
           E +E  +  ++E      +PL R     T+N TSQIA++G     IESLDY+
Sbjct: 41  ESSEVLLRYDDEAGGGPRQPLLRK---RTMNTTSQIAIVGANVCPIESLDYE 89


>tr|B8AUE4|B8AUE4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16021 PE=4 SV=1
          Length = 350

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +3

Query: 420 EHAEACIHMENEVRHPLPRPLKRSVSSATLNETSQIAMIGVQRSHIESLDYD 575
           E +E  +  ++E      +PL R     T+N TSQIA++G     IESLDY+
Sbjct: 41  ESSEVLLRYDDEAGGGPRQPLLRK---RTMNTTSQIAIVGANVCPIESLDYE 89


>tr|A3ASP0|A3ASP0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_013812 PE=4 SV=1
          Length = 799

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +3

Query: 420 EHAEACIHMENEVRHPLPRPLKRSVSSATLNETSQIAMIGVQRSHIESLDYD 575
           E +E  +  ++E      +PL R     T+N TSQIA++G     IESLDY+
Sbjct: 41  ESSEVLLRYDDEAGGGPRQPLLRK---RTMNTTSQIAIVGANVCPIESLDYE 89