DK952622 |
Clone id |
TST38A01NGRL0014_J14 |
Library |
TST38 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_J14. 5' end sequence. |
Accession |
DK952622 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL4192Contig1 |
Sequence |
GGATGGCACCATCCTCTTCTCTGTCGTGGGCAGAACGCACTATGGTTTTGACATCTTCTG CGTAGATGTCCCCCCGTCACTCTATTCCAGACAGAGCATTGCCCTCTCGGAAACTCTGCT CACCGACGGAATCTCTGTCAATTTCAATGGCTCCTTTGCATCCTCTGCTGATGGAAAGCA GGAAAAGCTTGTCTATGTCTCGGAGCGAACAGGCTCCCCGCAGTTGTACATCAACTCGGA GAAGGAAACACCAGAACTGGGGCCTCTTCAATGTACCTCACATAGGAAAGGCCATGGAGA TGACCCCTCTGGCCTTTTCTTTGACAGGCCTTCTATGTTTGGAGATAAGGTCTACTTTGT CGCGACTCAGGAAGAGTTTCTGCAAACAAGGGAATGCTACACTGCTGTGTATGTGAGCTC TCTTGCAACCGGTCATACTGCTCGGCTTACTCCACCCGATGTAGCAGATTTCAGTCCCAG CCTTTCGCCTTCAGGTAAGTGGGTTGCTGTTGCCTCATATGAGGGCCGAGGATGGCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q11DI2 |
Definition |
sp|Q11DI2|TOLB_MESSB Protein tolB OS=Mesorhizobium sp. (strain BNC1) |
Align length |
137 |
Score (bit) |
48.1 |
E-value |
3.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LN50 |
Definition |
tr|B8LN50|B8LN50_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
216 |
Score (bit) |
125.0 |
E-value |
1.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952622|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_J14, 5' (538 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LN50|B8LN50_PICSI Putative uncharacterized protein OS=Picea... 125 1e-27 tr|A2XNV4|A2XNV4_ORYSI Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|Q9XI10|Q9XI10_ARATH F8K7.10 protein (Putative uncharacterized... 121 3e-26 tr|Q6AVR6|Q6AVR6_ORYSJ Os03g0840200 protein OS=Oryza sativa subs... 121 3e-26 tr|A3APK3|A3APK3_ORYSJ Putative uncharacterized protein OS=Oryza... 121 3e-26 tr|A7Q0U3|A7Q0U3_VITVI Chromosome chr7 scaffold_42, whole genome... 117 5e-25 tr|Q9SYI5|Q9SYI5_ARATH Putative uncharacterized protein AT4g0187... 114 4e-24 tr|A5AGU7|A5AGU7_VITVI Putative uncharacterized protein OS=Vitis... 114 4e-24 tr|A9TPZ0|A9TPZ0_PHYPA Predicted protein OS=Physcomitrella paten... 113 6e-24 tr|Q8RWX8|Q8RWX8_ARATH Putative uncharacterized protein At4g0187... 112 1e-23 tr|A7NVH3|A7NVH3_VITVI Chromosome chr18 scaffold_1, whole genome... 108 2e-22 tr|A5AL89|A5AL89_VITVI Putative uncharacterized protein OS=Vitis... 108 2e-22 tr|Q8GVH2|Q8GVH2_ORYSJ Os07g0638100 protein OS=Oryza sativa subs... 105 1e-21 tr|A3BMM4|A3BMM4_ORYSJ Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|A2YP40|A2YP40_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|Q9XI11|Q9XI11_ARATH F8K7.9 (Putative uncharacterized protein ... 99 2e-19 tr|Q10MC3|Q10MC3_ORYSJ Os03g0314500 protein OS=Oryza sativa subs... 75 2e-12 tr|A2XFZ7|A2XFZ7_ORYSI Putative uncharacterized protein OS=Oryza... 75 2e-12 tr|Q84R85|Q84R85_ORYSJ Os03g0403400 protein OS=Oryza sativa subs... 73 8e-12 tr|A3AIX0|A3AIX0_ORYSJ Putative uncharacterized protein OS=Oryza... 73 8e-12 tr|A2XHT1|A2XHT1_ORYSI Putative uncharacterized protein OS=Oryza... 73 8e-12 tr|A2XRC3|A2XRC3_ORYSI Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|Q2QSF1|Q2QSF1_ORYSJ Os12g0431300 protein OS=Oryza sativa subs... 59 1e-07 tr|A2ZK03|A2ZK03_ORYSI Putative uncharacterized protein OS=Oryza... 59 1e-07 tr|Q01PE1|Q01PE1_SOLUE WD40 domain protein beta Propeller OS=Sol... 49 2e-04 tr|Q0C5V5|Q0C5V5_HYPNA TolB protein OS=Hyphomonas neptunium (str... 41 0.035 tr|Q1YJW2|Q1YJW2_MOBAS TolB protein, periplasmic component, biop... 41 0.035 tr|A6T0W0|A6T0W0_JANMA Periplasmic component of the Tol biopolym... 41 0.046 tr|B8H448|B8H448_CAUCR TolB protein OS=Caulobacter crescentus NA... 41 0.046 tr|B7X210|B7X210_COMTE Tol-Pal system beta propeller repeat prot... 41 0.046
>tr|B8LN50|B8LN50_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 714
Score = 125 bits (315), Expect = 1e-27 Identities = 79/216 (36%), Positives = 112/216 (51%), Gaps = 38/216 (17%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIALSETLLTDGISVNFNGSFA-------- 160 GT+ F+ VGR HY FDI+ + + P +S L ETL+TDG SVN NG + Sbjct: 38 GTLAFASVGRAHYAFDIYTLPLQPLRFSTN---LEETLVTDGESVNHNGQYLQGPGIQTL 94
Query: 161 -------SSADGKQEKLVYVSERTGSPQLYIN-----------------SEKETPELGPL 268 +++ + + +VSER G P+LY+N S +E E G Sbjct: 95 MHRLNINTTSTPVENVMAFVSERDGFPELYLNIYLKDNLPLLAEKAEENSRREALEDGKR 154
Query: 269 QCTSH------RKGHGDDPSGLFFDRPSMFGDKVYFVATQEEFLQTRECYTAVYVSSLAT 430 T + KG D P DRPSM G+ + +V+T+ + +R+ + AVY +S+ T Sbjct: 155 CLTINFGGVFEEKGKKDMPDLSMKDRPSMAGNSMVYVSTRGQTKASRKSWAAVYSTSIKT 214
Query: 431 GHTARLTPPDVADFSPSLSPSGKWVAVASYEGRGWQ 538 G T RLTP +AD SP++SPSG+WV AS RGWQ Sbjct: 215 GRTRRLTPDGIADLSPAVSPSGEWVMAASAGERGWQ 250
Score = 35.0 bits (79), Expect = 2.5 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Frame = +2
Query: 329 PSMFGDKVYFVATQEEFLQTRECYTAVYVSSL--ATGHTARLTPPDVADFSPSLSPSGKW 502 PS D F Q E + + +VY +S+ ++ R+TPP + F+P+ S +G W Sbjct: 281 PSWADDNTVFFHRQAE-----DGWWSVYRASVNSSSALVERITPPGIDAFTPAASRTGPW 335
Query: 503 VAVAS 517 +AVA+ Sbjct: 336 IAVAT 340
>tr|A2XNV4|A2XNV4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14253 PE=4 SV=1 Length = 682
Score = 122 bits (305), Expect = 2e-26 Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 6/183 (3%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIALSETLLTDGISVNFNGSFASSADGKQE 184 GTI+F+ +GR+ Y FDIF + + PS ++ A E LTDG+SVN+NG+FA ++D Sbjct: 28 GTIVFTTLGRSRYEFDIFSLPLAPSPHNP---AAEELRLTDGVSVNYNGNFAPASDS--- 81
Query: 185 KLVYVSERTGSPQLYIN----SEKETPELGPLQCTSHRKGHGDDPSGLFFDRPSMF--GD 346 +++VSER GS LY++ S +E E + +P L DRPS+ G Sbjct: 82 -ILFVSERNGSLNLYLSPVPSSRREALESASSSAATLSPLLPWEPIALK-DRPSLTPDGS 139
Query: 347 KVYFVATQEEFLQTRECYTAVYVSSLATGHTARLTPPDVADFSPSLSPSGKWVAVASYEG 526 ++ +V+T + R + AVY + L+TG T RLTP VADFSP++SPSG+W A AS Sbjct: 140 RLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLGVADFSPAVSPSGEWTAAASPGA 199
Query: 527 RGW 535 GW Sbjct: 200 AGW 202
>tr|Q9XI10|Q9XI10_ARATH F8K7.10 protein (Putative uncharacterized protein At1g21680) OS=Arabidopsis thaliana GN=At1g21680 PE=2 SV=1 Length = 706
Score = 121 bits (303), Expect = 3e-26 Identities = 82/208 (39%), Positives = 109/208 (52%), Gaps = 32/208 (15%) Frame = +2
Query: 8 TILFSVVGRTHYGFDIFCVDV--PPSLYSRQSIALSETLLTDGISVNFNGSFASSA---- 169 TI+F+ +GR+HY FDIF + PPS+ E +TDG SVNFNG F S + Sbjct: 33 TIIFTTLGRSHYEFDIFALSTTQPPSVSG-------ELRITDGESVNFNGYFPSPSPALL 85
Query: 170 ------------DGKQEKLVYVSERTGSPQLYI------NSEKETPELGPLQCTSHRK-- 289 D L+YV+ER G+ LY NS+ +T L+ S + Sbjct: 86 SLLPDETLIQMEDSSPLHLIYVTERNGTSSLYYDLVYGGNSDFKTKRRSVLEAPSRVQVP 145
Query: 290 --GHGDDPSGL----FFDRPSMFGDKVYFVATQEEFLQTRECYTAVYVSSLATGHTARLT 451 D SG+ F D+PS+ G+ + +V+T E + R +TAVY + L TG T RLT Sbjct: 146 LLSRFDHLSGMTVNSFKDKPSLSGEFIVYVSTHESSGEPRASWTAVYSTELKTGLTRRLT 205
Query: 452 PPDVADFSPSLSPSGKWVAVASYEGRGW 535 P VADFSP++SPSG AVASY RGW Sbjct: 206 PSGVADFSPAVSPSGNLTAVASYGERGW 233
>tr|Q6AVR6|Q6AVR6_ORYSJ Os03g0840200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0075M12.6 PE=2 SV=1 Length = 688
Score = 121 bits (303), Expect = 3e-26 Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 10/187 (5%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIALSETLLTDGISVNFNGSFASSADGKQE 184 GTI+F+ +GR+ Y FDIF + + PS ++ A +E LTDG+SVN+NG+FA ++D Sbjct: 28 GTIVFTTLGRSRYEFDIFSLPLAPSPHN--PAAAAELRLTDGVSVNYNGNFAPASDS--- 82
Query: 185 KLVYVSERTGSPQLYIN----SEKETPELGPLQCTSHRKGHGD----DPSGLFFDRPSMF 340 +++VSER GS LY++ S +E E +S +P L DRPS+ Sbjct: 83 -ILFVSERNGSLNLYLSPVPSSRREALESASSSSSSAAATISPLLPWEPIALK-DRPSLT 140
Query: 341 --GDKVYFVATQEEFLQTRECYTAVYVSSLATGHTARLTPPDVADFSPSLSPSGKWVAVA 514 G ++ +V+T + R + AVY + L+TG T RLTP VADFSP++SPSG+W A A Sbjct: 141 PDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLGVADFSPAVSPSGEWTAAA 200
Query: 515 SYEGRGW 535 S GW Sbjct: 201 SPGAAGW 207
>tr|A3APK3|A3APK3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012725 PE=4 SV=1 Length = 688
Score = 121 bits (303), Expect = 3e-26 Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 10/187 (5%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIALSETLLTDGISVNFNGSFASSADGKQE 184 GTI+F+ +GR+ Y FDIF + + PS ++ A +E LTDG+SVN+NG+FA ++D Sbjct: 28 GTIVFTTLGRSRYEFDIFSLPLAPSPHN--PAAAAELRLTDGVSVNYNGNFAPASDS--- 82
Query: 185 KLVYVSERTGSPQLYIN----SEKETPELGPLQCTSHRKGHGD----DPSGLFFDRPSMF 340 +++VSER GS LY++ S +E E +S +P L DRPS+ Sbjct: 83 -ILFVSERNGSLNLYLSPVPSSRREALESASSSSSSAAATISPLLPWEPIALK-DRPSLT 140
Query: 341 --GDKVYFVATQEEFLQTRECYTAVYVSSLATGHTARLTPPDVADFSPSLSPSGKWVAVA 514 G ++ +V+T + R + AVY + L+TG T RLTP VADFSP++SPSG+W A A Sbjct: 141 PDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLGVADFSPAVSPSGEWTAAA 200
Query: 515 SYEGRGW 535 S GW Sbjct: 201 SPGAAGW 207
>tr|A7Q0U3|A7Q0U3_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028181001 PE=4 SV=1 Length = 650
Score = 117 bits (292), Expect = 5e-25 Identities = 72/177 (40%), Positives = 100/177 (56%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIALSETLLTDGISVNFNGSFASSADGKQE 184 GTI F+ VGR HYGFD+F +++ P+L + S E LT G S+NFNG F + + Sbjct: 5 GTIAFTTVGRPHYGFDLFSLNLDPNLINHTS----ERRLTGGTSINFNGHFLD----ENQ 56
Query: 185 KLVYVSERTGSPQLYINSEKETPELGPLQCTSHRKGHGDDPSGLFFDRPSMFGDKVYFVA 364 LVYVSER+GSP++Y T P Q S P L+ DRP + ++YFV+ Sbjct: 57 TLVYVSERSGSPRIYQIRPGVTK---PEQLLSV-------PGSLYHDRPIVKNGRLYFVS 106
Query: 365 TQEEFLQTRECYTAVYVSSLATGHTARLTPPDVADFSPSLSPSGKWVAVASYEGRGW 535 E + ++AVY + L +LTP V D+SP++S SGK++AVASY R W Sbjct: 107 AHERPEKPFISWSAVYSTGLDDKAVVQLTPHGVVDYSPAISRSGKFIAVASYGSRPW 163
>tr|Q9SYI5|Q9SYI5_ARATH Putative uncharacterized protein AT4g01870 OS=Arabidopsis thaliana GN=AT4g01870 PE=2 SV=1 Length = 652
Score = 114 bits (284), Expect = 4e-24 Identities = 71/181 (39%), Positives = 102/181 (56%), Gaps = 4/181 (2%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIALSETLLTDGISVNFNGSFASSADGKQE 184 GTI+F+ VGRTHYGFD+F +++ S+ R LTDG+SVNFN F + K + Sbjct: 6 GTIIFTTVGRTHYGFDVFSLNIATSVERR---------LTDGVSVNFNAQFVND---KSD 53
Query: 185 KLVYVSERTGSPQLY-INSEKETPELGPLQCTSHRKGHGDDPSGLFFDRPSMF-GDKVYF 358 +V+VSER GS ++Y S PE P P F DRP + +++YF Sbjct: 54 DVVFVSERNGSARIYKTRSGISKPEQIP-----------GAPESYFHDRPIITQNNRLYF 102
Query: 359 VATQEEFLQTRECYTAVYVSSL--ATGHTARLTPPDVADFSPSLSPSGKWVAVASYEGRG 532 ++ E+ + + ++A+Y L A R+TPPD ADFSP++S SG ++AVASY R Sbjct: 103 ISAHEQPDRYFKNWSALYTVELNSAKREVTRVTPPDTADFSPAVSQSGDFLAVASYGTRS 162
Query: 533 W 535 W Sbjct: 163 W 163
>tr|A5AGU7|A5AGU7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027089 PE=4 SV=1 Length = 677
Score = 114 bits (284), Expect = 4e-24 Identities = 71/177 (40%), Positives = 98/177 (55%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIALSETLLTDGISVNFNGSFASSADGKQE 184 GTI F+ VGR HYGFD+F +++ P+L + S E LT G S+NFNG F + + Sbjct: 32 GTIAFTTVGRPHYGFDLFSLNLDPNLINHTS----ERRLTGGTSINFNGHFLD----ENQ 83
Query: 185 KLVYVSERTGSPQLYINSEKETPELGPLQCTSHRKGHGDDPSGLFFDRPSMFGDKVYFVA 364 LVYVSE +GSP++Y T P Q S P L+ DRP + ++YFV+ Sbjct: 84 TLVYVSEXSGSPRIYQIRPGVTK---PEQLLSV-------PGSLYHDRPIVKNGRLYFVS 133
Query: 365 TQEEFLQTRECYTAVYVSSLATGHTARLTPPDVADFSPSLSPSGKWVAVASYEGRGW 535 E + ++AVY + L LTP V D+SP++S SGK++AVASY R W Sbjct: 134 AHERPEKPFISWSAVYSTGLDDKAVVXLTPHGVVDYSPAISRSGKFIAVASYGSRPW 190
>tr|A9TPZ0|A9TPZ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148801 PE=4 SV=1 Length = 710
Score = 113 bits (283), Expect = 6e-24 Identities = 78/199 (39%), Positives = 105/199 (52%), Gaps = 21/199 (10%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIA---------LSETLLTDGISVNFNGSF 157 GTI FS +GR + FD++ V ++S+ + ET +T G SVN+N Sbjct: 28 GTIGFSTLGRLSFAFDVYTV-----VFSQMGVLRGGGGGVGDFQETRVTLGESVNYNAQL 82
Query: 158 AS-SADGKQEKLVYVSERTGSPQLYINSEKETPELGP-----LQCTSHRK-----GHGDD 304 S E L+YVSE GSPQLY+ + P G L S R+ + Sbjct: 83 LEGSGSDVPELLLYVSEVEGSPQLYL----DVPLTGRFAIDRLPTRSSRRIELLADRLNA 138
Query: 305 PSGLFF-DRPSMFGDKVYFVATQEEFLQTRECYTAVYVSSLATGHTARLTPPDVADFSPS 481 PS F DRPSM GD FV+T+E+ + + + AVY + T RLTPP + D+SP+ Sbjct: 139 PSKAFLNDRPSMIGDVFIFVSTEEDVGKPVQGWNAVYSLNFITSVVKRLTPPGITDYSPA 198
Query: 482 LSPSGKWVAVASYEGRGWQ 538 +SPSG+WVAV S EGRGWQ Sbjct: 199 VSPSGEWVAVGSNEGRGWQ 217
Score = 36.2 bits (82), Expect = 1.1 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +2
Query: 407 VYVSSLATGHTARLTPPDVADFSPSLSPSGKWVAVAS 517 V VS + R+TP V F+P+ S SGKW+AVA+ Sbjct: 272 VNVSDTSADQAERVTPSGVHAFTPAASRSGKWIAVAT 308
>tr|Q8RWX8|Q8RWX8_ARATH Putative uncharacterized protein At4g01870 (Fragment) OS=Arabidopsis thaliana GN=At4g01870 PE=2 SV=1 Length = 657
Score = 112 bits (280), Expect = 1e-23 Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 4/181 (2%) Frame = +2
Query: 5 GTILFSVVGRTHYGFDIFCVDVPPSLYSRQSIALSETLLTDGISVNFNGSFASSADGKQE 184 GTI+F+ VGRTHYGFD+F +++ S+ R LTDG+SVNFN F + K + Sbjct: 11 GTIIFTTVGRTHYGFDVFSLNIATSVERR---------LTDGVSVNFNAQFVND---KSD 58
Query: 185 KLVYVSERTGSPQLY-INSEKETPELGPLQCTSHRKGHGDDPSGLFFDRPSMF-GDKVYF 358 +V+VSER GS ++Y S PE P P F DRP + +++YF Sbjct: 59 DVVFVSERNGSARIYKTRSGISKPEQIP-----------GAPESYFHDRPIITQNNRLYF 107
Query: 359 VATQEEFLQTRECYTAVYVSSL--ATGHTARLTPPDVADFSPSLSPSGKWVAVASYEGRG 532 ++ E+ + + ++A+Y L A R+TPPD DFSP++S SG ++AVASY R Sbjct: 108 ISAHEQPDRYFKNWSALYTVELNSAKREVTRVTPPDTTDFSPAVSQSGDFLAVASYGTRS 167
Query: 533 W 535 W Sbjct: 168 W 168
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