DK952609 |
Clone id |
TST38A01NGRL0014_J01 |
Library |
TST38 |
Length |
628 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_J01. 5' end sequence. |
Accession |
DK952609 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GCTAGGCCTTCTTCAGCAGCAACACGTTAGTGTCACCCCATGCTCCTTCACACGGACGCG CTATCCTCGTGTCTTGTCCATGTCGGCTGTGACTTCAACAGCTCGCAAGACCATCGCTAG CACCTTCTCCGATCTCAAGTCTGCCGGAAAGGTTGCCCTCATACCTTACATTACTGCCGG AGATCCAAGCTTGTCCACCACTGCTGAAGCTCTTGTGGAGCTTGATAAGACAGGAGCAGA CATTCTTGAGTTGGGAGTTCCTTATTCTGACCCTCTTGCCGATGGCCCGGTTATTCAGGC AGCTGCAACGAGAGCTCTTCGAAATGGCACTACCTTGGAGGCTGTTTTGGAAATGCTAAA AGAGGTAATACCTCGACTCACAGCTCCCATTGTGCTATTCACATACTATAACCCAATTTT AAAGCGAGGCATAGAAAACTTTTTACAATCTATCAAGGCAGTGGGTGTCACAGGTTTGCT TGTTCCTGACCTTCCTCTTGAGGAGACAGATGCTCTTAGAAGGCTATCTACACATTATGG ATTAGAACTGGTGTTACTGACGACTCCGACTACTCCAAAGGAGCGAATGCTTGAGATTTC CCAAGCTTCGCAAGGTTTTGTTTATTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3MBD2 |
Definition |
sp|Q3MBD2|TRPA_ANAVT Tryptophan synthase alpha chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) |
Align length |
172 |
Score (bit) |
200.0 |
E-value |
4.0e-51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8LA83 |
Definition |
tr|Q8LA83|Q8LA83_ARATH Tryptophan synthase alpha chain OS=Arabidopsis thaliana |
Align length |
203 |
Score (bit) |
216.0 |
E-value |
9.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952609|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_J01, 5' (628 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8LA83|Q8LA83_ARATH Tryptophan synthase alpha chain OS=Arabid... 216 9e-55 tr|Q42529|Q42529_ARATH Tryptophan synthase alpha chain (At3g5464... 215 2e-54 tr|Q0WWE0|Q0WWE0_ARATH Tryptophan synthase alpha chain OS=Arabid... 214 3e-54 tr|B6SCD2|B6SCD2_LAMGA Indole-3-glycerol phosphate lyase IGL2 OS... 213 1e-53 tr|A9RJP2|A9RJP2_PHYPA Predicted protein OS=Physcomitrella paten... 212 2e-53 tr|B6SCC6|B6SCC6_9LAMI Indole-3-glycerol phosphate lyase IGL1 OS... 210 6e-53 tr|A2XMX3|A2XMX3_ORYSI Putative uncharacterized protein OS=Oryza... 209 1e-52 tr|B6SCC7|B6SCC7_9LAMI Indole-3-glycerol phosphate lyase IGL2 OS... 209 1e-52 tr|Q7Y1H9|Q7Y1H9_ORYSJ Os03g0797000 protein OS=Oryza sativa subs... 208 2e-52 tr|O22765|O22765_ARATH Tryptophan synthase alpha 1-like protein ... 208 2e-52 tr|B6TI69|B6TI69_MAIZE Indole-3-glycerol phosphate lyase OS=Zea ... 208 2e-52 tr|B2Y0K4|B2Y0K4_MAIZE Tryptophan synthase alpha OS=Zea mays GN=... 208 2e-52 tr|Q06H27|Q06H27_ARAHY Tryptophan synthase alpha chain (Fragment... 207 3e-52 tr|Q659I8|Q659I8_ISATI Tryptophan synthase, alpha subunit (TSA1)... 207 5e-52 tr|A7PUK7|A7PUK7_VITVI Chromosome chr7 scaffold_31, whole genome... 206 1e-51 tr|Q9FQ75|Q9FQ75_MAIZE Putative tryptophan synthase alpha OS=Zea... 205 2e-51 tr|B4FGW7|B4FGW7_MAIZE Indole-3-glycerol phosphate lyase OS=Zea ... 204 3e-51 tr|A3BH76|A3BH76_ORYSJ Putative uncharacterized protein OS=Oryza... 204 3e-51 tr|Q6ZL61|Q6ZL61_ORYSJ Os07g0182100 protein OS=Oryza sativa subs... 204 4e-51 tr|A5AI98|A5AI98_VITVI Putative uncharacterized protein OS=Vitis... 204 4e-51 tr|Q8YZP6|Q8YZP6_ANASP Tryptophan synthase alpha chain OS=Anabae... 204 5e-51 tr|B2IXG3|B2IXG3_NOSP7 Tryptophan synthase, alpha subunit OS=Nos... 202 1e-50 tr|Q8YMW3|Q8YMW3_ANASP Tryptophan synthase alpha chain OS=Anabae... 202 1e-50 tr|B6TS31|B6TS31_MAIZE Indole-3-glycerol phosphate lyase OS=Zea ... 202 1e-50 tr|B6SCD1|B6SCD1_LAMGA Indole-3-glycerol phosphate lyase IGL1 (F... 201 2e-50 tr|B6SCC9|B6SCC9_9MAGN Indole-3-glycerol phosphate lyase IGL1vs1... 199 9e-50 tr|B6SCD0|B6SCD0_9MAGN Indole-3-glycerol phosphate lyase IGL1vs2... 198 3e-49 tr|B4WLC9|B4WLC9_9SYNE Tryptophan synthase, alpha subunit OS=Syn... 197 3e-49 tr|B4AV01|B4AV01_9CHRO Tryptophan synthase, alpha subunit OS=Cya... 197 6e-49 tr|A0ZB41|A0ZB41_NODSP Tryptophan synthase alpha chain OS=Nodula... 196 1e-48
>tr|Q8LA83|Q8LA83_ARATH Tryptophan synthase alpha chain OS=Arabidopsis thaliana PE=2 SV=1 Length = 312
Score = 216 bits (550), Expect = 9e-55 Identities = 114/203 (56%), Positives = 144/203 (70%) Frame = +2
Query: 20 QHVSVTPCSFTRTRYPRVLSMSAVTSTARKTIASTFSDLKSAGKVALIPYITAGDPSLST 199 +H S S + R+ + S+S TS+ +A TF+ LK GKVA IPYITAGDP LST Sbjct: 22 RHSSPPDSSLSFKRFTPMASLS--TSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLST 79
Query: 200 TAEALVELDKTGADILELGVPYSDPLADGPVIQAAATRALRNGTTLEAVLEMLKEVIPRL 379 TAEAL LD G+DI+ELGVPYSDPLADGPVIQAAATR+L GT L+++LEML +V+P++ Sbjct: 80 TAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQI 139
Query: 380 TAPIVLFTYYNPILKRGIENFLQSIKAVGVTGLLVPDLPLEETDALRRLSTHYGXXXXXX 559 + PI LFTYYNPILKRG+ F+ SI+AVGV GL+VPD+PLEET+ LR+ + + Sbjct: 140 SCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLL 199
Query: 560 XXXXXXKERMLEISQASQGFVYL 628 ERM I AS+GF+YL Sbjct: 200 TTPTTPTERMKRIVDASEGFIYL 222
>tr|Q42529|Q42529_ARATH Tryptophan synthase alpha chain (At3g54640) OS=Arabidopsis thaliana GN=TSA1 PE=2 SV=1 Length = 312
Score = 215 bits (547), Expect = 2e-54 Identities = 114/203 (56%), Positives = 144/203 (70%) Frame = +2
Query: 20 QHVSVTPCSFTRTRYPRVLSMSAVTSTARKTIASTFSDLKSAGKVALIPYITAGDPSLST 199 +H S S + R+ + S+S TS+ +A TF+ LK GKVA IPYITAGDP LST Sbjct: 22 RHSSPPDSSLSFKRFTPMASLS--TSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLST 79
Query: 200 TAEALVELDKTGADILELGVPYSDPLADGPVIQAAATRALRNGTTLEAVLEMLKEVIPRL 379 TAEAL LD G+DI+ELGVPYSDPLADGPVIQAAATR+L GT L+++LEML +V+P++ Sbjct: 80 TAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQI 139
Query: 380 TAPIVLFTYYNPILKRGIENFLQSIKAVGVTGLLVPDLPLEETDALRRLSTHYGXXXXXX 559 + PI LFTYYNPILKRG+ F+ SI+AVGV GL+VPD+PLEET+ LR+ + + Sbjct: 140 SCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLL 199
Query: 560 XXXXXXKERMLEISQASQGFVYL 628 ERM I AS+GF+YL Sbjct: 200 TTPTTPTERMKLIVDASEGFIYL 222
>tr|Q0WWE0|Q0WWE0_ARATH Tryptophan synthase alpha chain OS=Arabidopsis thaliana GN=At3g54640 PE=2 SV=1 Length = 312
Score = 214 bits (546), Expect = 3e-54 Identities = 114/203 (56%), Positives = 144/203 (70%) Frame = +2
Query: 20 QHVSVTPCSFTRTRYPRVLSMSAVTSTARKTIASTFSDLKSAGKVALIPYITAGDPSLST 199 +H S S + R+ + S+S TS+ +A TF+ LK GKVA IPYITAGDP LST Sbjct: 22 RHSSPPDSSLSFKRFTPMASLS--TSSPTLGLADTFTQLKKQGKVACIPYITAGDPDLST 79
Query: 200 TAEALVELDKTGADILELGVPYSDPLADGPVIQAAATRALRNGTTLEAVLEMLKEVIPRL 379 TAEAL LD G+DI+ELGVPYSDPLADGPVIQAAATR+L GT L+++LEML +V+P++ Sbjct: 80 TAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQI 139
Query: 380 TAPIVLFTYYNPILKRGIENFLQSIKAVGVTGLLVPDLPLEETDALRRLSTHYGXXXXXX 559 + PI LFTYYNPILKRG+ F+ SI+AVGV GL+VPD+PLEET+ LR+ + + Sbjct: 140 SCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLL 199
Query: 560 XXXXXXKERMLEISQASQGFVYL 628 ERM I AS+GF+YL Sbjct: 200 TTPTTPTERMKLIVDASEGFIYL 222
>tr|B6SCD2|B6SCD2_LAMGA Indole-3-glycerol phosphate lyase IGL2 OS=Lamium galeobdolon PE=2 SV=1 Length = 309
Score = 213 bits (541), Expect = 1e-53 Identities = 109/206 (52%), Positives = 143/206 (69%) Frame = +2
Query: 11 LQQQHVSVTPCSFTRTRYPRVLSMSAVTSTARKTIASTFSDLKSAGKVALIPYITAGDPS 190 L+ + S++ S +R M+ + + + I+ TFS LK GKVALIPYITAGDP Sbjct: 14 LKTTNQSISQRSSSRVSLCYKPPMATLQTATKAGISETFSRLKQQGKVALIPYITAGDPD 73
Query: 191 LSTTAEALVELDKTGADILELGVPYSDPLADGPVIQAAATRALRNGTTLEAVLEMLKEVI 370 LSTTAEAL LD G+DI+ELGVPYSDPLADGPVIQAAATR+L G + ++ MLKEVI Sbjct: 74 LSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLSRGADFDKIIGMLKEVI 133
Query: 371 PRLTAPIVLFTYYNPILKRGIENFLQSIKAVGVTGLLVPDLPLEETDALRRLSTHYGXXX 550 P+L+ P+ LFTYYNPILKRG+E F+ ++K G+ GL+VPD+PLEET+ LR+ +T Sbjct: 134 PQLSCPVGLFTYYNPILKRGVEEFMTTLKDTGINGLIVPDVPLEETEMLRKEATKNNIEL 193
Query: 551 XXXXXXXXXKERMLEISQASQGFVYL 628 +RM EI +A++GF+YL Sbjct: 194 VLLTTPTTPSDRMKEIVEAAEGFIYL 219
>tr|A9RJP2|A9RJP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115585 PE=3 SV=1 Length = 268
Score = 212 bits (539), Expect = 2e-53 Identities = 113/174 (64%), Positives = 129/174 (74%), Gaps = 2/174 (1%) Frame = +2
Query: 113 IASTFSDLKSAGKVALIPYITAGDPSLSTTAEALVELDKTGADILELGVPYSDPLADGPV 292 IA TFS LK GKVA IPY+TAGDP L TTA+AL LD GADI+ELGVPYSDPLADGPV Sbjct: 4 IADTFSTLKQLGKVAFIPYLTAGDPDLDTTAQALRLLDDCGADIIELGVPYSDPLADGPV 63
Query: 293 IQA--AATRALRNGTTLEAVLEMLKEVIPRLTAPIVLFTYYNPILKRGIENFLQSIKAVG 466 IQA AATR+L GTTL+ VL MLKE+ P L AP+VLFTYYNPILKRG+E FL+++K G Sbjct: 64 IQACAAATRSLSKGTTLDKVLSMLKEISPSLKAPVVLFTYYNPILKRGMEPFLKAVKEAG 123
Query: 467 VTGLLVPDLPLEETDALRRLSTHYGXXXXXXXXXXXXKERMLEISQASQGFVYL 628 +GL+VPD+PLEETD LR S G K RM I++ASQGFVYL Sbjct: 124 GSGLVVPDIPLEETDKLRERSVANGLELILLTTPTTPKSRMKIIAKASQGFVYL 177
>tr|B6SCC6|B6SCC6_9LAMI Indole-3-glycerol phosphate lyase IGL1 OS=Aphelandra squarrosa PE=2 SV=1 Length = 321
Score = 210 bits (534), Expect = 6e-53 Identities = 107/193 (55%), Positives = 138/193 (71%) Frame = +2
Query: 50 TRTRYPRVLSMSAVTSTARKTIASTFSDLKSAGKVALIPYITAGDPSLSTTAEALVELDK 229 T T + M+A+T+ +I+ TFS LK G+VALIPYITAGDP LSTTA+AL LD Sbjct: 32 TSTSFKCKPPMAALTTAPTLSISETFSKLKQRGEVALIPYITAGDPDLSTTAKALKILDS 91
Query: 230 TGADILELGVPYSDPLADGPVIQAAATRALRNGTTLEAVLEMLKEVIPRLTAPIVLFTYY 409 +GADI+ELGVPYSDPLADGPVIQAAATRAL G + E V+ MLK+V+P+L++PI LF YY Sbjct: 92 SGADIIELGVPYSDPLADGPVIQAAATRALARGASFEKVIGMLKDVVPQLSSPIALFIYY 151
Query: 410 NPILKRGIENFLQSIKAVGVTGLLVPDLPLEETDALRRLSTHYGXXXXXXXXXXXXKERM 589 N ILKRG++ F+ ++K GV G++VPD+PLEET+ LR + Y ERM Sbjct: 152 NVILKRGVKKFVTTLKETGVHGIIVPDVPLEETELLRNEAVKYNIEMVLLTTPTTPTERM 211
Query: 590 LEISQASQGFVYL 628 I++ +QGF+YL Sbjct: 212 KAIAEVAQGFIYL 224
>tr|A2XMX3|A2XMX3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13899 PE=3 SV=1 Length = 279
Score = 209 bits (532), Expect = 1e-52 Identities = 104/180 (57%), Positives = 130/180 (72%) Frame = +2
Query: 89 VTSTARKTIASTFSDLKSAGKVALIPYITAGDPSLSTTAEALVELDKTGADILELGVPYS 268 V ++ +A TFS L+ GK A IP+ITAGDP L+TT++ L LD G+D++ELGVPYS Sbjct: 10 VVGAGKRGVAETFSRLREQGKTAFIPFITAGDPDLATTSKVLKILDSCGSDVIELGVPYS 69
Query: 269 DPLADGPVIQAAATRALRNGTTLEAVLEMLKEVIPRLTAPIVLFTYYNPILKRGIENFLQ 448 DPLADGPVIQAAATRAL+ G T ++V+ MLK VIP L+ PIV+FTYYNPILKRG+ NF+ Sbjct: 70 DPLADGPVIQAAATRALKKGATFDSVIAMLKGVIPELSCPIVIFTYYNPILKRGVSNFMA 129
Query: 449 SIKAVGVTGLLVPDLPLEETDALRRLSTHYGXXXXXXXXXXXXKERMLEISQASQGFVYL 628 IK GV GL+VPDLPLEET LR + +G ERM EI++AS+GF+YL Sbjct: 130 IIKQAGVHGLVVPDLPLEETALLRNEAVMHGIELVLLTTPTTPTERMKEIAKASEGFIYL 189
>tr|B6SCC7|B6SCC7_9LAMI Indole-3-glycerol phosphate lyase IGL2 OS=Aphelandra squarrosa PE=2 SV=1 Length = 321
Score = 209 bits (531), Expect = 1e-52 Identities = 105/183 (57%), Positives = 134/183 (73%) Frame = +2
Query: 80 MSAVTSTARKTIASTFSDLKSAGKVALIPYITAGDPSLSTTAEALVELDKTGADILELGV 259 M+A+T+ I+ TFS LK G+VALIPYITAGDP LSTTA+AL LD +GADI+ELGV Sbjct: 42 MAALTTAPTLPISETFSKLKQRGEVALIPYITAGDPDLSTTAKALKILDSSGADIIELGV 101
Query: 260 PYSDPLADGPVIQAAATRALRNGTTLEAVLEMLKEVIPRLTAPIVLFTYYNPILKRGIEN 439 PYSDPLADGPVIQAAATRAL G + E V+ MLK+V+P+L++PI LF YYN ILKRG++ Sbjct: 102 PYSDPLADGPVIQAAATRALARGASFEKVIGMLKDVVPQLSSPIALFIYYNVILKRGVKK 161
Query: 440 FLQSIKAVGVTGLLVPDLPLEETDALRRLSTHYGXXXXXXXXXXXXKERMLEISQASQGF 619 F+ ++K GV G++VPD+PLEET+ LR + Y ERM I++ +QGF Sbjct: 162 FVTTLKETGVHGIIVPDVPLEETELLRNEAVKYNIEMVLLTTPTTPTERMKAIAEVAQGF 221
Query: 620 VYL 628 +YL Sbjct: 222 IYL 224
>tr|Q7Y1H9|Q7Y1H9_ORYSJ Os03g0797000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0094F01.18 PE=2 SV=1 Length = 279
Score = 208 bits (530), Expect = 2e-52 Identities = 104/180 (57%), Positives = 130/180 (72%) Frame = +2
Query: 89 VTSTARKTIASTFSDLKSAGKVALIPYITAGDPSLSTTAEALVELDKTGADILELGVPYS 268 V ++ +A TFS L+ GK A IP+ITA DP L+TT++AL LD G+D++ELGVPYS Sbjct: 10 VVGAGKRGVAETFSRLREQGKTAFIPFITASDPDLATTSKALKILDSCGSDVIELGVPYS 69
Query: 269 DPLADGPVIQAAATRALRNGTTLEAVLEMLKEVIPRLTAPIVLFTYYNPILKRGIENFLQ 448 DPLADGPVIQAAATRAL+ G T ++V+ MLK VIP L+ PIV+FTYYNPILKRG+ NF+ Sbjct: 70 DPLADGPVIQAAATRALKKGATFDSVIAMLKGVIPELSCPIVIFTYYNPILKRGVSNFMA 129
Query: 449 SIKAVGVTGLLVPDLPLEETDALRRLSTHYGXXXXXXXXXXXXKERMLEISQASQGFVYL 628 IK GV GL+VPDLPLEET LR + +G ERM EI++AS+GF+YL Sbjct: 130 IIKQAGVHGLVVPDLPLEETALLRNEAVMHGIELVLLTTPTTPTERMKEIAKASEGFIYL 189
>tr|O22765|O22765_ARATH Tryptophan synthase alpha 1-like protein OS=Arabidopsis thaliana GN=AT4g02610 PE=2 SV=2 Length = 275
Score = 208 bits (530), Expect = 2e-52 Identities = 106/179 (59%), Positives = 131/179 (73%) Frame = +2
Query: 92 TSTARKTIASTFSDLKSAGKVALIPYITAGDPSLSTTAEALVELDKTGADILELGVPYSD 271 T ++ ++ TF+ LKS GKVALIPYITAGDP LSTTA+AL LD G+DI+ELGVPYSD Sbjct: 6 TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65
Query: 272 PLADGPVIQAAATRALRNGTTLEAVLEMLKEVIPRLTAPIVLFTYYNPILKRGIENFLQS 451 PLADGP IQAAA R+L GT +++ MLKEVIP+L+ PI LFTYYNPIL+RG+EN++ Sbjct: 66 PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125
Query: 452 IKAVGVTGLLVPDLPLEETDALRRLSTHYGXXXXXXXXXXXXKERMLEISQASQGFVYL 628 IK GV GLLVPD+PLEET+ LR + + KERM I +AS+GF+YL Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYL 184
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