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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952543
Clone id TST38A01NGRL0014_G01
Library
Length 622
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_G01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CCTTTCTCTTCAACGTCTGCAGAAGAGGCTGGCAGGCAGCTAGCTGATAGCCGCAATTCT
AATCTCTATAGTACTGCGGCTATATTAGGTTTCCATCAATAATCTAGCTGAAGGTTTTCG
TTTTTGGGATCTATCCTTTTCTTCTTGTGAATTTCGGTTTACCTATAATTATACTCATGG
CCAACCGAGTCCCCCTGGTGATCGCTGTGCTGGGCTTGCTACTTGTGTTATCTATGGTTA
GCACCATCGCAGAGGCCAAGAAGAAGCCCAAGAAGCTATCCTTCTTCATGTTCATTGCCG
TGCAAAACAATAGCTTTCTGGACAACCCCAACGGGCAGTTCACGGCCGTGCTGTCCGGCG
AGGCCCCCGTGACGCCGCAGCCCTTCGCCTTCGGCAATCTGCACACCTTTGACAATCCGC
TGTCCAAGACGATGTCACTGGCCAATCCGGCCGACAGGGTTGGCCACGTGCAGGGTTGGT
ACGGCAATTGCGGGCAGTCGGCGCTGACACTGTGCCTGACGCAGACGTTTGCATACAATG
ACAGCGTCTATGCTGGCACCTTCTCGCTCTTGGGGAGTGGCGTTGCGTTCGATCCAGTGA
AGTACGCGCCCATCGTGGGCGG
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 119
Score (bit) 43.1
E-value 0.001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952543|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_G01, 5'
         (622 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    43   0.001
sp|A8G9K9|DNAJ_SERP5 Chaperone protein dnaJ OS=Serratia proteama...    30   7.7  

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
 Frame = +3

Query: 258 KKKP----KKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFA-FGNLHTFDNPL 422
           K+KP    K L F+    + N     N      A   G +     P + FGN+  FD+P+
Sbjct: 24  KRKPYKPCKNLVFYFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPI 83

Query: 423 SKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAGTFSLLGSGVAFDPV 599
           + + SL+  + +VG  QG+Y    ++  T  L+ TF  N + + GT +  G+    DP+
Sbjct: 84  TLSHSLS--SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAGA----DPI 136


>sp|A8G9K9|DNAJ_SERP5 Chaperone protein dnaJ OS=Serratia
           proteamaculans (strain 568) GN=dnaJ PE=3 SV=1
          Length = 375

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -1

Query: 418 GLSKVCRLPKAKGCGV---TGASPDSTAVNCP 332
           G++K  R+P  + CGV   +GA P S+ V CP
Sbjct: 130 GVTKEIRIPTLEECGVCHGSGAKPGSSPVTCP 161
tr_hit_id A7P031
Definition tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 119
Score (bit) 53.1
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952543|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_G01, 5'
         (622 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome ...    53   1e-05
tr|A7P030|A7P030_VITVI Chromosome chr6 scaffold_3, whole genome ...    53   1e-05
tr|A5B702|A5B702_VITVI Putative uncharacterized protein OS=Vitis...    53   1e-05
tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome ...    52   4e-05
tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome ...    51   6e-05
tr|A2ZC31|A2ZC31_ORYSI Putative uncharacterized protein OS=Oryza...    51   6e-05
tr|A9PCN5|A9PCN5_POPTR Putative uncharacterized protein OS=Popul...    50   8e-05
tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragmen...    50   8e-05
tr|A5BN87|A5BN87_VITVI Putative uncharacterized protein (Fragmen...    50   1e-04
tr|Q9C523|Q9C523_ARATH Dirigent protein, putative (At1g58170) (P...    49   2e-04
tr|Q53NP4|Q53NP4_ORYSJ Dirigent-like protein OS=Oryza sativa sub...    49   2e-04
tr|A5AKQ8|A5AKQ8_VITVI Putative uncharacterized protein OS=Vitis...    49   3e-04
tr|A7P029|A7P029_VITVI Chromosome chr6 scaffold_3, whole genome ...    47   7e-04
tr|Q1KPV7|Q1KPV7_9CARY Dirigent-related protein OS=Tamarix andro...    47   0.001
tr|Q9SKQ3|Q9SKQ3_ARATH Putative disease resistance response prot...    47   0.001
tr|Q84TH6|Q84TH6_ARATH Putative disease resistance response prot...    47   0.001
tr|A7PW09|A7PW09_VITVI Chromosome chr8 scaffold_34, whole genome...    47   0.001
tr|Q9LDS3|Q9LDS3_9LAMI Dirigent-like protein (Fragment) OS=Fraxi...    46   0.002
tr|Q27JA8|Q27JA8_9CONI Dirigent-like protein pDIR4 (Fragment) OS...    46   0.002
tr|Q27JA3|Q27JA3_9CONI Dirigent-like protein pDIR9 OS=Picea enge...    46   0.002
tr|Q9C891|Q9C891_ARATH Putative uncharacterized protein F7A10.7 ...    45   0.003
tr|Q27JA1|Q27JA1_PICSI Dirigent-like protein pDIR11 OS=Picea sit...    45   0.003
tr|Q45W75|Q45W75_ARAHY Disease resistance-responsive family prot...    45   0.004
tr|A7PW02|A7PW02_VITVI Chromosome chr8 scaffold_34, whole genome...    45   0.004
tr|Q8L7P2|Q8L7P2_ARATH Putative uncharacterized protein At1g5521...    44   0.010
tr|A8IXC7|A8IXC7_BRACM Disease resistance response protein OS=Br...    43   0.017
tr|A7PW03|A7PW03_VITVI Chromosome chr8 scaffold_34, whole genome...    42   0.022
tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata GN...    42   0.029
tr|Q53NP6|Q53NP6_ORYSJ Dirigent-like protein OS=Oryza sativa sub...    42   0.029
tr|A2ZC29|A2ZC29_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.029

>tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024747001
           PE=4 SV=1
          Length = 195

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
 Frame = +3

Query: 264 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 443
           + +KLS F F       + DN +G+    +   AP T    AFG ++  DNPL+    L+
Sbjct: 47  RKEKLSHFRFY------WHDNVSGRNPTSIQVVAPPTNSTTAFGLVNMIDNPLTIEPKLS 100

Query: 444 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIV 617
             +  VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG    F  V+   ++
Sbjct: 101 --SKMVGKAQGLYTSASQEEIGLLMIMNFAFFDGKYNGSTFTVLGRNTVFSKVREMSVI 157


>tr|A7P030|A7P030_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024746001
           PE=4 SV=1
          Length = 205

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = +3

Query: 366 PVTPQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDS 545
           PV      FG+++  DNPL+    L +    VG  QG+Y + GQ    L +   FA+ND 
Sbjct: 86  PVNNSSTFFGSINMIDNPLTIEPKLNSKM--VGKAQGFYASAGQENFGLLMVMNFAFNDD 143

Query: 546 VYAG-TFSLLGSGVAFDPVKYAPIVG 620
            Y G TF+++G    F  V+   IVG
Sbjct: 144 KYNGSTFTVIGRNDVFSKVREMEIVG 169


>tr|A5B702|A5B702_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_029647 PE=4 SV=1
          Length = 193

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = +3

Query: 366 PVTPQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDS 545
           PV      FG+++  DNPL+    L +    VG  QG+Y + GQ    L +   FA+ND 
Sbjct: 74  PVNNSSTFFGSINMIDNPLTIEPKLNSKM--VGKAQGFYASAGQENFGLLMVMNFAFNDD 131

Query: 546 VYAG-TFSLLGSGVAFDPVKYAPIVG 620
            Y G TF+++G    F  V+   IVG
Sbjct: 132 KYNGSTFTVIGRNDVFSKVREMEIVG 157


>tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036083001
           PE=4 SV=1
          Length = 365

 Score = 51.6 bits (122), Expect = 4e-05
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
 Frame = +3

Query: 342 TAVLSGEAPVTPQ-PFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCL 518
           TAV   +A  T + P  FG L   D+PL++   L++    VG  QG YG+  Q    L +
Sbjct: 55  TAVRVAQASQTDKSPTLFGALLMADDPLTEGPDLSSKL--VGRAQGLYGSASQEGFGLIM 112

Query: 519 TQTFAYNDSVYAGT-FSLLGSGVAFDPVKYAPIVG 620
             ++ + D +Y G+  S+LG   A +PV+  P+VG
Sbjct: 113 ALSYGFCDGIYNGSSISVLGLNQALNPVRELPVVG 147


>tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024748001
           PE=4 SV=1
          Length = 194

 Score = 50.8 bits (120), Expect = 6e-05
 Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
 Frame = +3

Query: 264 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 443
           + +KLS F F     +  +  PN     V+S   P T    AFG ++  DNPL+    L+
Sbjct: 46  RKEKLSHFRFYW---HDIVSGPNPSSIQVVS---PPTNSTTAFGLINMIDNPLTVGPKLS 99

Query: 444 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 620
             +  VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG       V+   ++G
Sbjct: 100 --SKMVGKAQGLYTSASQEEIGLLMIMNFAFIDDKYNGSTFTVLGRNTVLSKVREMSVIG 157


>tr|A2ZC31|A2ZC31_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35336 PE=4 SV=1
          Length = 178

 Score = 50.8 bits (120), Expect = 6e-05
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
 Frame = +3

Query: 327 PNGQFTAVLSGEAPVT-PQPFAFGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSA 503
           PN     V   EAP +      FG ++  D+PL+   SL  P+  VGHVQG Y + G+  
Sbjct: 45  PNSMVAKV--AEAPTSRASATVFGTVYVIDDPLTDGPSLTAPSRLVGHVQGMYVSAGKET 102

Query: 504 LTLCLTQTFAY-NDSVYAGTFSLLGSGVAFDPVKYAPIVG 620
           ++L +  +F +  D  Y G+   +       PV+  P+VG
Sbjct: 103 MSLLMAMSFVFAADEPYNGSSVAIFGPNPARPVREIPVVG 142


>tr|A9PCN5|A9PCN5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 157

 Score = 50.4 bits (119), Expect = 8e-05
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
 Frame = +3

Query: 264 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 443
           K +KLS F    V  +  L  PN     V+    P+     AFG +   DNPL  T+   
Sbjct: 9   KKEKLSHFK---VYWHDILTGPNPSSIQVVP---PLNTSITAFGLVRMIDNPL--TLGPE 60

Query: 444 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 620
             +  VG  QG+Y    Q  L L +   FA+ +  Y G T ++LG    F  V+  P++G
Sbjct: 61  MSSRMVGKAQGFYAQASQQDLGLLMAMNFAFIEGKYNGSTITVLGRNEVFSTVREMPVIG 120


>tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragment)
           OS=Vitis vinifera GN=VITISV_009709 PE=4 SV=1
          Length = 168

 Score = 50.4 bits (119), Expect = 8e-05
 Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
 Frame = +3

Query: 264 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 443
           + +KLS F F     +  +  PN     V+S   P T    AFG ++  DNPL+    L+
Sbjct: 46  RKEKLSHFRFYW---HDIVSGPNPSSIQVVS---PPTNSTTAFGLINMIDNPLTVGPKLS 99

Query: 444 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAFDPVKYAPIVG 620
             +  VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG       V+   ++G
Sbjct: 100 --SKMVGKAQGLYTSASQEEIGLLMIMNFAFIDXKYNGSTFTVLGRNTVLSKVREMSVIG 157


>tr|A5BN87|A5BN87_VITVI Putative uncharacterized protein (Fragment)
           OS=Vitis vinifera GN=VITISV_009708 PE=4 SV=1
          Length = 147

 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
 Frame = +3

Query: 264 KPKKLSFFMFIAVQNNSFLDNPNGQFTAVLSGEAPVTPQPFAFGNLHTFDNPLSKTMSLA 443
           + +KLS F F       + DN +G+    +   AP T    AFG ++  DNPL+    L+
Sbjct: 46  RKEKLSHFRFY------WHDNVSGRNPTSVQVVAPPTNSTTAFGLVNMIDNPLTIEPKLS 99

Query: 444 NPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFSLLGSGVAF 590
             +  VG  QG Y +  Q  + L +   FA+ D  Y G TF++LG    F
Sbjct: 100 --SKMVGKAQGLYTSASQEEIGLLMIMNFAFFDGKYNGSTFTVLGRNTVF 147


>tr|Q9C523|Q9C523_ARATH Dirigent protein, putative (At1g58170)
           (Putative uncharacterized protein
           At1g58170/68103_m00125) (Putative uncharacterized
           protein T15M6.17) OS=Arabidopsis thaliana
           GN=At1g58170/68103_m00125 PE=2 SV=1
          Length = 185

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +3

Query: 390 FGNLHTFDNPLSKTMSLANPADRVGHVQGWYGNCGQSALTLCLTQTFAYNDSVYAG-TFS 566
           FG +   DNPL+ T  L++    VG  QG+Y    +  + L +   FA  D  Y G T +
Sbjct: 73  FGLMRMIDNPLTLTPKLSSKM--VGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTIT 130

Query: 567 LLGSGVAFDPVKYAPIVG 620
           +LG    FD V+  P++G
Sbjct: 131 VLGRNSVFDKVREMPVIG 148