BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952530|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_F12, 5'
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A5V3U6|TIG_SPHWW Trigger factor OS=Sphingomonas wittichii (st...    30   5.1  
sp|Q6UVK1|CSPG4_HUMAN Chondroitin sulfate proteoglycan 4 OS=Homo...    30   6.8  
sp|P53094|MDS3_YEAST Negative regulator of sporulation MDS3 OS=S...    30   8.7  
sp|Q17R10|AF1L2_BOVIN Actin filament-associated protein 1-like 2...    30   8.8  

>sp|A5V3U6|TIG_SPHWW Trigger factor OS=Sphingomonas wittichii
           (strain RW1 / DSM 6014 / JCM 10273) GN=tig PE=3 SV=1
          Length = 551

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = +3

Query: 135 SGSANGARQCDRTGSAPPVEMHSSRNGMGFWNVRNLEGKVKSMSRSVKVELPQSWFSDAL 314
           +GS +G      TG+   VE+ S R   GF +   LEG  K  SRS+ V  P+ +   +L
Sbjct: 173 AGSVDGVAFEGGTGTGMSVELGSGRLIPGFED--QLEGIKKGESRSLNVTFPKDYGEKSL 230

Query: 315 LSASLNFPV 341
              +  F V
Sbjct: 231 AGKAAVFEV 239


>sp|Q6UVK1|CSPG4_HUMAN Chondroitin sulfate proteoglycan 4 OS=Homo
           sapiens GN=CSPG4 PE=1 SV=1
          Length = 2322

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
 Frame = -2

Query: 417 HLYHHRCDLFVDQRPLHVQN--------PRNTVPQGSLMMQTTEHLRTSSVVAPP*HSDS 262
           H+  HR ++ VDQ P H  N        PR ++  G L  + + HL+   +   P  +++
Sbjct: 290 HINAHRLEISVDQYPTHTSNRGVLSYLEPRGSLLLGGLDAEASRHLQEHRLGLTPEATNA 349

Query: 261 S 259
           S
Sbjct: 350 S 350


>sp|P53094|MDS3_YEAST Negative regulator of sporulation MDS3
            OS=Saccharomyces cerevisiae GN=MDS3 PE=1 SV=1
          Length = 1487

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 13/60 (21%)
 Frame = +3

Query: 126  RSSSGSANGARQCDRTGSAP-------------PVEMHSSRNGMGFWNVRNLEGKVKSMS 266
            + SSGSANG +     GS               P + H+S   +GF N  N++G  +S S
Sbjct: 1145 QESSGSANGEKTATGAGSLETSSTNVPTVFAGGPRDSHNSVGSIGFPNSMNIQGSRRSTS 1204


>sp|Q17R10|AF1L2_BOVIN Actin filament-associated protein 1-like 2
           OS=Bos taurus GN=AFAP1L2 PE=2 SV=1
          Length = 817

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = -1

Query: 187 GGALPVRSHCRAPLADPELERGRNETCIEAKEHAISEEWQVLENEETEAR 38
           G + PV+   +A  A PE++ G+N T  E K +  +EE + LE ++ E R
Sbjct: 637 GSSPPVKDRLKA--ASPEIKLGKNRTEAEVKRY--TEEKERLEKKKEEIR 682

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952530|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_F12, 5'
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TPI5|A9TPI5_PHYPA Predicted protein (Fragment) OS=Physcomit...    45   0.003
tr|A8Q7J8|A8Q7J8_BRUMA Immunoglobulin I-set domain containing pr...    35   2.9  
tr|Q121Y0|Q121Y0_POLSJ IucA/IucC OS=Polaromonas sp. (strain JS66...    34   3.7  
tr|Q01P54|Q01P54_SOLUE Mov34/MPN/PAD-1 family protein OS=Solibac...    34   5.0  
tr|O76632|O76632_CAEEL Putative uncharacterized protein OS=Caeno...    33   6.4  
tr|A5FMD2|A5FMD2_FLAJ1 Two component regulator three Y domain pr...    33   8.3  
tr|Q10ZP1|Q10ZP1_TRIEI Adenylate/guanylate cyclase OS=Trichodesm...    33   8.5  
tr|A9RQD1|A9RQD1_PHYPA Predicted protein OS=Physcomitrella paten...    33   8.5  

>tr|A9TPI5|A9TPI5_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_148653 PE=4 SV=1
          Length = 199

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 23/51 (45%), Positives = 32/51 (62%)
 Frame = +3

Query: 363 AHAEVFDQQINHIYGDIGAGLDIGVQILYXXXXXXXXXXXSYFVVKQVLIR 515
           A+A VF+   N  YG++GAGL+ GVQ++Y           S+ VV+QVLIR
Sbjct: 1   ANASVFEP--NMAYGEVGAGLEFGVQLIYLGALLSLLAAGSFLVVRQVLIR 49


>tr|A8Q7J8|A8Q7J8_BRUMA Immunoglobulin I-set domain containing protein
            OS=Brugia malayi GN=Bm1_45475 PE=4 SV=1
          Length = 6163

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -1

Query: 163  HCRAPLADPELERGRNETCIEAKEHAISEEWQ---VLENEETEARDSMQAFAIAR 8
            HCR+    P+L RG +E  + AKEHA+    Q   ++  + T + D++Q+   AR
Sbjct: 5759 HCRSDEISPKLGRGLDEAMLLAKEHAVKGVIQIILIISADGTSSDDAIQSAQNAR 5813


>tr|Q121Y0|Q121Y0_POLSJ IucA/IucC OS=Polaromonas sp. (strain JS666 /
           ATCC BAA-500) GN=Bpro_4783 PE=4 SV=1
          Length = 610

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 219 GFWNVRNLEGKVKSMSRSVKVELPQSWFSDALLSASLNFPVVLCFSGSAHAEVFDQQINH 398
           G   +R+L G + +   S    + + WFSD +  A L +PV+ C+   AH  VF+  + +
Sbjct: 403 GEMRMRHLLGDIAAREHSPLASVTERWFSDYV--AQLMYPVLHCY--FAHGLVFEPHLQN 458

Query: 399 IYGDIGAG 422
           +   + AG
Sbjct: 459 VLVGLQAG 466


>tr|Q01P54|Q01P54_SOLUE Mov34/MPN/PAD-1 family protein OS=Solibacter
           usitatus (strain Ellin6076) GN=Acid_7667 PE=4 SV=1
          Length = 473

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = -1

Query: 241 RFLTFQKPMPFLLECISTGGALPVRSHCRAPLADPELERGRNETCIEAKEHAISEEWQVL 62
           R +  Q   P + E  S  G LP     + P+ DPE+++ R+E   +A +  +   WQ +
Sbjct: 386 RLIVHQANAPDVREVTSFLGKLP---EIKPPVEDPEIQKQRDELAKQAAKLKVDLNWQAM 442

Query: 61  ENEETE 44
           + ++ E
Sbjct: 443 KTKKLE 448


>tr|O76632|O76632_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=H22K11.2 PE=2 SV=3
          Length = 644

 Score = 33.5 bits (75), Expect = 6.4
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
 Frame = +3

Query: 135 SGSANGARQCDRTGSAPPVEMHSSRNGMGFWNVRNLE-GKVKSMSRSVKVELPQSWFSDA 311
           +  +NG     R G+ P +       G+ +W +RN + GK +S   S   E+ Q W+   
Sbjct: 105 AAESNGLYTILRIGNRPYISAEWDNGGLPWWLIRNTKIGKYRSSDPSFMTEVTQ-WWKHL 163

Query: 312 LLSASLNFPVVLCFSGSAHAEVFDQQINHIYGDIG 416
           L       P +          V   QI H YG +G
Sbjct: 164 L-------PKIYPLMRKNAGPVLMVQIEHFYGALG 191


>tr|A5FMD2|A5FMD2_FLAJ1 Two component regulator three Y domain protein
            OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM
            2064 / UW101) GN=Fjoh_0602 PE=3 SV=1
          Length = 2491

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 138  GSANGARQCDRTGSAPPVEMHSSRNGMGF-WNVRNLEGKVKSMSRSVKV 281
            GSAN   +   +G   P E  ++ NG+G+ W   NL+G +KS S S K+
Sbjct: 1908 GSAN-IPETVTSGQIIPFEYSTTSNGVGYKWTFYNLDGSIKSTSTSNKI 1955


>tr|Q10ZP1|Q10ZP1_TRIEI Adenylate/guanylate cyclase OS=Trichodesmium
           erythraeum (strain IMS101) GN=Tery_3155 PE=4 SV=1
          Length = 1172

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -1

Query: 178 LPVRSHCRAPLADPELERGRNETCIEAKEHAISEEWQVLENEETEARDSMQAFAIARS 5
           LP+RS+ RA +  P +  G     I  + ++   +WQ  E E  EA  S  A A+ +S
Sbjct: 459 LPLRSNSRALMVVPLIVDGEIIGSISLRNNSYERQWQASEIELAEALASQAAIAVQQS 516


>tr|A9RQD1|A9RQD1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_69230 PE=4 SV=1
          Length = 1897

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -2

Query: 471 LSPGGLQDTIFGHQCPTQHLYHHRCDLFVD----QRPLHVQNP 355
           L P G    +F HQC TQHL+  + D+FV       PL   NP
Sbjct: 478 LRPQGDLRLVFAHQCVTQHLFEKQPDVFVSILDILVPLQWMNP 520