DK952479 |
Clone id |
TST38A01NGRL0014_D05 |
Library |
TST38 |
Length |
591 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_D05. 5' end sequence. |
Accession |
DK952479 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3715Contig1 |
Sequence |
CTCCATCGTCTGCCCGAGGATTTTGCGGCATTTTCTCCACAGGTTCAGTGTTTGGAGACA GCTAGAACGCCAAACTGGAGAGTGTGTCTGAGTTTGTCAATGCTACTCTTTTCAACCCAA CTCTTGTTATATATGGCACGAGTTGGATAACTACTGTTGTAGCTATTGTGCTGCTTCCCC TCTTTCTGTTGTTAATGAGTAAAGTAAAGGGCCAGAAAGATTTGAAAGTAAGAGGGGTGA CTGTTGAGGTTGGAGGTGAACCTGGACTGACCAAGAGGAGTCATCGTTTCCTGAAGCTTG TTGAGACTCCATGGGAGGGAGCTGTGACTCTTGCTGCCCTTTATGAGCAGTCTTGCCAAA AGAACAGCACTCTGCCTGCATTTGGGACAAGGATGCTCTTGAAAAAGGAGGCAGAGGTCA GTGAAGATGGAAGGACATTTGACAAGCTGACCCTTGGTGAGTATGAATGGATTACTTTCC ACGAAGGACTAGAGCAGGCAAGCAATTTTGCATCTGGCCTAATGGCCATTGGGCATGGAG GAGGAGAACATTGTGCCATCTTTGCTGAAACAAGGGCTGACTGGTTCATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O60488 |
Definition |
sp|O60488|ACSL4_HUMAN Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapiens |
Align length |
117 |
Score (bit) |
74.3 |
E-value |
4.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T939 |
Definition |
tr|A9T939|A9T939_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
147 |
Score (bit) |
160.0 |
E-value |
4.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952479|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_D05, 5' (591 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T939|A9T939_PHYPA Predicted protein OS=Physcomitrella paten... 160 4e-38 tr|A9U3Q4|A9U3Q4_PHYPA Predicted protein OS=Physcomitrella paten... 154 5e-36 tr|A7Q2X7|A7Q2X7_VITVI Chromosome chr12 scaffold_47, whole genom... 140 4e-32 tr|Q53JH3|Q53JH3_ORYSJ Probable acyl-CoA synthetase, 62297-59022... 137 3e-31 tr|B8BJB4|B8BJB4_ORYSI Putative uncharacterized protein OS=Oryza... 137 3e-31 tr|B5LAV7|B5LAV7_CAPAN Putative long-chain acyl-CoA synthetase O... 136 1e-30 tr|B6U6S2|B6U6S2_MAIZE Acyl-CoA synthetase long-chain family mem... 135 1e-30 tr|Q9CAP8|Q9CAP8_ARATH Putative acyl-CoA synthetase; 62297-59022... 135 2e-30 tr|Q2QX58|Q2QX58_ORYSJ Os12g0168700 protein OS=Oryza sativa subs... 132 1e-29 tr|Q9SJD4|Q9SJD4_ARATH Putative acyl-CoA synthetase (At2g04350/T... 132 2e-29 tr|Q940V0|Q940V0_ARATH T23O15.3/T23O15.3 OS=Arabidopsis thaliana... 132 2e-29 tr|Q9FNT6|Q9FNT6_BRANA Long chain acyl-CoA synthetase OS=Brassic... 130 6e-29 tr|B8BND3|B8BND3_ORYSI Putative uncharacterized protein OS=Oryza... 130 6e-29 tr|A3CFB6|A3CFB6_ORYSJ Putative uncharacterized protein OS=Oryza... 130 6e-29 tr|B8AWK7|B8AWK7_ORYSI Putative uncharacterized protein OS=Oryza... 128 2e-28 tr|A7NVD1|A7NVD1_VITVI Chromosome chr18 scaffold_1, whole genome... 128 3e-28 tr|Q5W6W7|Q5W6W7_ORYSJ Os05g0317200 protein OS=Oryza sativa subs... 127 5e-28 tr|A3B2J9|A3B2J9_ORYSJ Putative uncharacterized protein OS=Oryza... 127 5e-28 tr|Q2PEY2|Q2PEY2_TRIPR Putative long chain acyl-CoA synthetase 9... 125 2e-27 tr|Q8VWS5|Q8VWS5_NARPS Putative acyl-CoA synthetase (Fragment) O... 109 1e-22 tr|Q6PFP1|Q6PFP1_DANRE Acyl-CoA synthetase long-chain family mem... 78 3e-13 tr|Q1LVA8|Q1LVA8_DANRE Novel protein similar to vertebrate acyl-... 77 9e-13 tr|Q28Y67|Q28Y67_DROPS GA21288 OS=Drosophila pseudoobscura pseud... 77 9e-13 tr|B4GGL7|B4GGL7_DROPE GL17113 OS=Drosophila persimilis GN=GL171... 77 9e-13 tr|B0S5C4|B0S5C4_DANRE Novel protein similar to H.sapiens ACSL3,... 76 1e-12 tr|Q4TGA0|Q4TGA0_TETNG Chromosome undetermined SCAF3827, whole g... 75 3e-12 tr|Q4RV97|Q4RV97_TETNG Chromosome 15 SCAF14992, whole genome sho... 75 3e-12 tr|A0JPA8|A0JPA8_XENTR LOC100036652 protein OS=Xenopus tropicali... 75 3e-12 tr|B3N878|B3N878_DROER GG23376 OS=Drosophila erecta GN=GG23376 P... 75 3e-12 tr|A7T2D4|A7T2D4_NEMVE Predicted protein OS=Nematostella vectens... 75 3e-12
>tr|A9T939|A9T939_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_142073 PE=3 SV=1 Length = 705
Score = 160 bits (406), Expect = 4e-38 Identities = 81/147 (55%), Positives = 102/147 (69%) Frame = +3
Query: 150 TTVVAIVXXXXXXXXMSKVKGQKDLKVRGVTVEVGGEPGLTKRSHRFLKLVETPWEGAVT 329 T V ++ MSK K + KVR V +VGGEPGL KR+ RFL+LVETPWEGA T Sbjct: 12 TLTVGLLVPFILSLVMSKAKRKP--KVRAVECDVGGEPGLAKRNQRFLRLVETPWEGADT 69
Query: 330 LAALYEQSCQKNSTLPAFGTRMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGLEQASNF 509 LAAL+EQ C + + GTR L+KKE E S DGR+F+KLTLG+Y WIT+ + L + NF Sbjct: 70 LAALFEQCCHRYADKKFLGTRQLIKKEFESSGDGRSFEKLTLGKYVWITYSQALTRVENF 129
Query: 510 ASGLMAIGHGGGEHCAIFAETRADWFI 590 ASGL+A+GH GE A+FAETRA+W + Sbjct: 130 ASGLVALGHKKGERVAMFAETRAEWLL 156
>tr|A9U3Q4|A9U3Q4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228033 PE=3 SV=1 Length = 697
Score = 154 bits (388), Expect = 5e-36 Identities = 78/127 (61%), Positives = 100/127 (78%), Gaps = 1/127 (0%) Frame = +3
Query: 213 QKDLKVRGVTVE-VGGEPGLTKRSHRFLKLVETPWEGAVTLAALYEQSCQKNSTLPAFGT 389 +K +K + VTVE VGGE GLTKR+ RF KLVETP EGA TLA+L+EQSC ++S GT Sbjct: 23 KKRIKQQAVTVENVGGEKGLTKRNARFDKLVETPREGADTLASLFEQSCAQHSGNRFLGT 82
Query: 390 RMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGLEQASNFASGLMAIGHGGGEHCAIFAE 569 R+LLK+E EVSEDGR F+K+TLG+YEW T+ + +AS+FASGL+A+GHG GE AIF+E Sbjct: 83 RVLLKRETEVSEDGRKFEKVTLGQYEWTTYAQAFLRASDFASGLVALGHGQGERVAIFSE 142
Query: 570 TRADWFI 590 TR +W + Sbjct: 143 TRPEWLL 149
>tr|A7Q2X7|A7Q2X7_VITVI Chromosome chr12 scaffold_47, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029070001 PE=3 SV=1 Length = 719
Score = 140 bits (354), Expect = 4e-32 Identities = 67/127 (52%), Positives = 89/127 (70%) Frame = +3
Query: 210 GQKDLKVRGVTVEVGGEPGLTKRSHRFLKLVETPWEGAVTLAALYEQSCQKNSTLPAFGT 389 G+K +K RGV VEVG E G R+ R+ +LVE PWEGA T+AAL+EQSC K+S P GT Sbjct: 41 GKKKVKQRGVPVEVGDELGFAMRNSRYTELVEVPWEGATTIAALFEQSCGKHSRDPFLGT 100
Query: 390 RMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGLEQASNFASGLMAIGHGGGEHCAIFAE 569 R L+ +E + DGR F+K+ LGEY+W T+ E +A NFASGL+ +GH H AIF++ Sbjct: 101 RKLINREFITAGDGRKFEKVHLGEYQWETYEEIFNRACNFASGLIKLGHNVDSHVAIFSD 160
Query: 570 TRADWFI 590 T+A+W I Sbjct: 161 TQAEWLI 167
>tr|Q53JH3|Q53JH3_ORYSJ Probable acyl-CoA synthetase, 62297-59022 [imported]-Arabidopsis thaliana OS=Oryza sativa subsp. japonica GN=LOC_Os11g06880 PE=3 SV=1 Length = 690
Score = 137 bits (346), Expect = 3e-31 Identities = 67/131 (51%), Positives = 91/131 (69%) Frame = +3
Query: 198 SKVKGQKDLKVRGVTVEVGGEPGLTKRSHRFLKLVETPWEGAVTLAALYEQSCQKNSTLP 377 +K KG+K RGV V+VGGEPG R+H+F + VET WEG TLA L+EQSC++ +P Sbjct: 19 TKRKGEKK---RGVPVDVGGEPGYVIRNHKFERPVETHWEGVSTLAELFEQSCEQYVYMP 75
Query: 378 AFGTRMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGLEQASNFASGLMAIGHGGGEHCA 557 GTR L+ +E E + DGR+F+KL LG+YEW ++ + + NF+SGL+ IGH E A Sbjct: 76 LLGTRKLISREMEAARDGRSFEKLHLGQYEWKSYADAFKTVCNFSSGLVRIGHQRDERVA 135
Query: 558 IFAETRADWFI 590 IFA+TRA+W I Sbjct: 136 IFADTRAEWQI 146
>tr|B8BJB4|B8BJB4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35270 PE=4 SV=1 Length = 697
Score = 137 bits (346), Expect = 3e-31 Identities = 67/131 (51%), Positives = 91/131 (69%) Frame = +3
Query: 198 SKVKGQKDLKVRGVTVEVGGEPGLTKRSHRFLKLVETPWEGAVTLAALYEQSCQKNSTLP 377 +K KG+K RGV V+VGGEPG R+H+F + VET WEG TLA L+EQSC++ +P Sbjct: 19 TKRKGEKK---RGVPVDVGGEPGYAIRNHKFERPVETHWEGVSTLAELFEQSCEQYVYMP 75
Query: 378 AFGTRMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGLEQASNFASGLMAIGHGGGEHCA 557 GTR L+ +E E + DGR+F+KL LG+YEW ++ + + NF+SGL+ IGH E A Sbjct: 76 LLGTRKLISREMEAARDGRSFEKLHLGQYEWKSYADAFKTVCNFSSGLVRIGHQRDERVA 135
Query: 558 IFAETRADWFI 590 IFA+TRA+W I Sbjct: 136 IFADTRAEWQI 146
>tr|B5LAV7|B5LAV7_CAPAN Putative long-chain acyl-CoA synthetase OS=Capsicum annuum PE=2 SV=1 Length = 726
Score = 136 bits (342), Expect = 1e-30 Identities = 70/153 (45%), Positives = 96/153 (62%) Frame = +3
Query: 132 YGTSWITTVVAIVXXXXXXXXMSKVKGQKDLKVRGVTVEVGGEPGLTKRSHRFLKLVETP 311 YG+S +T V I M + G+K K RGV V+VGGE GL R+ + +LVE P Sbjct: 27 YGSSGVTGAVFIAIIMPIILSML-LMGKKKAKQRGVPVQVGGEAGLAMRNVKSARLVEVP 85
Query: 312 WEGAVTLAALYEQSCQKNSTLPAFGTRMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGL 491 WEGA T+ AL+EQSC+K+S+ GTR L+ ++ + DGR F+KL LGEY+W ++ + Sbjct: 86 WEGATTVPALFEQSCKKHSSDRCLGTRKLVSRDFVTASDGRKFEKLHLGEYQWESYGQVF 145
Query: 492 EQASNFASGLMAIGHGGGEHCAIFAETRADWFI 590 ++ NFASGL+ GH H AI AETR +W I Sbjct: 146 DRTCNFASGLIKFGHDVDTHAAICAETRPEWII 178
>tr|B6U6S2|B6U6S2_MAIZE Acyl-CoA synthetase long-chain family member 3 OS=Zea mays PE=2 SV=1 Length = 726
Score = 135 bits (341), Expect = 1e-30 Identities = 72/153 (47%), Positives = 95/153 (62%) Frame = +3
Query: 132 YGTSWITTVVAIVXXXXXXXXMSKVKGQKDLKVRGVTVEVGGEPGLTKRSHRFLKLVETP 311 YG + + VVA++ +S + G+K K R V VGGE G R+ RF LVE P Sbjct: 28 YGVNGV--VVALLLAVVTPVLLSMMFGKKT-KQRAVRANVGGEEGFAMRNSRFSSLVEVP 84
Query: 312 WEGAVTLAALYEQSCQKNSTLPAFGTRMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGL 491 WEGA T++AL+E + +K S GTR L+K+E S DGR F+KL LGEYEW T+ E Sbjct: 85 WEGATTMSALFEMASKKYSRRRCLGTRKLIKREFVESSDGRKFEKLHLGEYEWDTYAEAF 144
Query: 492 EQASNFASGLMAIGHGGGEHCAIFAETRADWFI 590 +A NFASGL+ +GH H AIF++TRA+W I Sbjct: 145 NRACNFASGLVKMGHDLDSHAAIFSDTRAEWII 177
>tr|Q9CAP8|Q9CAP8_ARATH Putative acyl-CoA synthetase; 62297-59022 (Long chain acyl-CoA synthetase 9) OS=Arabidopsis thaliana GN=LACS9 PE=2 SV=1 Length = 691
Score = 135 bits (340), Expect = 2e-30 Identities = 68/129 (52%), Positives = 86/129 (66%) Frame = +3
Query: 204 VKGQKDLKVRGVTVEVGGEPGLTKRSHRFLKLVETPWEGAVTLAALYEQSCQKNSTLPAF 383 V+ K K RGV V+VGGEPG R+HRF + V + WE TL L+E SC +S Sbjct: 18 VQKSKKEKKRGVVVDVGGEPGYAIRNHRFTEPVSSHWEHISTLPELFEISCNAHSDRVFL 77
Query: 384 GTRMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGLEQASNFASGLMAIGHGGGEHCAIF 563 GTR L+ +E E SEDG+TF+KL LG+YEW+TF + LE +FASGL+ IGH E AIF Sbjct: 78 GTRKLISREIETSEDGKTFEKLHLGDYEWLTFGKTLEAVCDFASGLVQIGHKTEERVAIF 137
Query: 564 AETRADWFI 590 A+TR +WFI Sbjct: 138 ADTREEWFI 146
>tr|Q2QX58|Q2QX58_ORYSJ Os12g0168700 protein OS=Oryza sativa subsp. japonica GN=Os12g0168700 PE=2 SV=1 Length = 698
Score = 132 bits (332), Expect = 1e-29 Identities = 64/122 (52%), Positives = 84/122 (68%) Frame = +3
Query: 225 KVRGVTVEVGGEPGLTKRSHRFLKLVETPWEGAVTLAALYEQSCQKNSTLPAFGTRMLLK 404 K+R + V+VGGEPG R++RF + VET WEG TLA L+EQSC+ +P GTR L+ Sbjct: 26 KMRALPVDVGGEPGYAIRNYRFKQPVETHWEGVTTLAELFEQSCKDYVNMPLLGTRKLIS 85
Query: 405 KEAEVSEDGRTFDKLTLGEYEWITFHEGLEQASNFASGLMAIGHGGGEHCAIFAETRADW 584 +E E S DGR+F+KL LGEY+W + E + NFASGL+ +GH + AIFAETRA+W Sbjct: 86 REQESSLDGRSFEKLHLGEYDWKCYAEVFKSVCNFASGLIRLGHQKTDRVAIFAETRAEW 145
Query: 585 FI 590 I Sbjct: 146 QI 147
>tr|Q9SJD4|Q9SJD4_ARATH Putative acyl-CoA synthetase (At2g04350/T23O15.3) (Long chain acyl-CoA synthetase 8) OS=Arabidopsis thaliana GN=LACS8 PE=2 SV=1 Length = 720
Score = 132 bits (331), Expect = 2e-29 Identities = 65/129 (50%), Positives = 86/129 (66%) Frame = +3
Query: 204 VKGQKDLKVRGVTVEVGGEPGLTKRSHRFLKLVETPWEGAVTLAALYEQSCQKNSTLPAF 383 + G K K RGV ++VGGE G T R R +LV+ PWEGA T+ AL+EQSC+K S Sbjct: 41 LNGTKKGKKRGVPIKVGGEEGYTMRHARAPELVDVPWEGAATMPALFEQSCKKYSKDRLL 100
Query: 384 GTRMLLKKEAEVSEDGRTFDKLTLGEYEWITFHEGLEQASNFASGLMAIGHGGGEHCAIF 563 GTR + KE + DGR F+KL LGEY+W ++ E E+ NFASGL+ +GH + AIF Sbjct: 101 GTREFIDKEFITASDGRKFEKLHLGEYKWQSYGEVFERVCNFASGLVNVGHNVDDRVAIF 160
Query: 564 AETRADWFI 590 ++TRA+WFI Sbjct: 161 SDTRAEWFI 169
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