DK952100 |
Clone id |
TST38A01NGRL0013_C23 |
Library |
TST38 |
Length |
631 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_C23. 5' end sequence. |
Accession |
DK952100 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GTCCTTCGCATGCTACGGAGCTACCTCCGGCATTCTTTGCTGTCAGACCTTCGCACAGAG AGCTACCTCATGGGCTGGACGCACATCTTCTCCCTCGCCATGTGGCCATTATCATGGATG GCAACTCTAGGTGGGCAGATACAAGGGGTCTTTCGTGTGCGGCTGGGCATGAAGCAGGAG CAAAGTCTCTAAAGGAGATAGTTCGGCTTTCTTGTGAATGGGGCCTTGCGGCACTCACCG TGTTTGCTTTTTCCACCGAGAATTGGCACCGTGGACAGGTGGAGATTTCAATTTTGATGC AGTTGTTCCAGAACGTCTTGACAGAAGAGGTCGACACTTTGGTTAAGGAGAACATAGAAG TTCGTGTTATTGGAGATACTCAGAGGTTCCCACTGCCATTGCAGTCATTGATTCACAAAG TACAGCAGAAGACGGCTAACAATACTGGATTAAAATTTACAGTTGCAGCTAGTTATAGTG GTCGCTATGATATTGTCCAAGCTTGTCAACGAGTTGCAGCTAATGTGCAGCAAGGAAAAC TGAACCCTAAGGATATAACAGAGCGTCACCTGGAGGACCAGCTGGGGACGAGTTGGATTG GTGATATAAGGAACCCAGATCTGCTGATCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56Y11 |
Definition |
sp|Q56Y11|DDPS2_ARATH Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana |
Align length |
198 |
Score (bit) |
184.0 |
E-value |
4.0e-46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RXS2 |
Definition |
tr|A9RXS2|A9RXS2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
190 |
Score (bit) |
231.0 |
E-value |
3.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952100|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_C23, 5' (631 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RXS2|A9RXS2_PHYPA Predicted protein (Fragment) OS=Physcomit... 231 3e-59 tr|A9T0L2|A9T0L2_PHYPA Predicted protein OS=Physcomitrella paten... 223 7e-57 tr|A9RFW0|A9RFW0_PHYPA Predicted protein OS=Physcomitrella paten... 222 1e-56 tr|Q94DE7|Q94DE7_ORYSJ Putative undecaprenyl pyrophosphate synth... 191 4e-47 tr|B6TV95|B6TV95_MAIZE Undecaprenyl pyrophosphate synthetase OS=... 185 2e-45 tr|B7K1S7|B7K1S7_SYNP8 Undecaprenyl diphosphate synthase OS=Syne... 184 3e-45 tr|B2ITZ3|B2ITZ3_NOSP7 Undecaprenyl diphosphate synthase OS=Nost... 184 4e-45 tr|B5X0P4|B5X0P4_ARATH At5g58770 OS=Arabidopsis thaliana PE=2 SV=1 184 5e-45 tr|A8YKN9|A8YKN9_MICAE UppS protein OS=Microcystis aeruginosa PC... 183 6e-45 tr|B4VWB4|B4VWB4_9CYAN Undecaprenyl diphosphate synthase OS=Micr... 182 1e-44 tr|B4BZ15|B4BZ15_9CHRO Undecaprenyl diphosphate synthase OS=Cyan... 182 2e-44 tr|B4B8R1|B4B8R1_9CHRO Undecaprenyl diphosphate synthase OS=Cyan... 181 2e-44 tr|B0JI62|B0JI62_MICAN Undecaprenyl pyrophosphate synthetase OS=... 181 3e-44 tr|B7KH91|B7KH91_9CHRO Undecaprenyl diphosphate synthase OS=Cyan... 180 5e-44 tr|Q4C4S4|Q4C4S4_CROWT Di-trans-poly-cis-decaprenylcistransferas... 178 3e-43 tr|A0ZL16|A0ZL16_NODSP Undecaprenyl pyrophosphate synthetase OS=... 177 4e-43 tr|A0YPC5|A0YPC5_9CYAN Undecaprenyl pyrophosphate synthetase OS=... 177 5e-43 tr|A5BX88|A5BX88_VITVI Putative uncharacterized protein OS=Vitis... 177 5e-43 tr|A7NYG4|A7NYG4_VITVI Chromosome chr6 scaffold_3, whole genome ... 177 6e-43 tr|B1WWH5|B1WWH5_CYAA5 Undecaprenyl pyrophosphate synthetase OS=... 175 2e-42 tr|B8HLE0|B8HLE0_9CHRO Undecaprenyl diphosphate synthase OS=Cyan... 175 2e-42 tr|A3ITL3|A3ITL3_9CHRO Putative uncharacterized protein OS=Cyano... 174 4e-42 tr|A5GLZ2|A5GLZ2_SYNPW Undecaprenyl pyrophosphate synthetase OS=... 174 5e-42 tr|A2WX52|A2WX52_ORYSI Putative uncharacterized protein OS=Oryza... 172 1e-41 tr|Q5N2N1|Q5N2N1_SYNP6 Undecaprenyl pyrophosphate synthetase OS=... 172 2e-41 tr|Q31RM3|Q31RM3_SYNE7 Undecaprenyl pyrophosphate synthetase OS=... 172 2e-41 tr|Q112C6|Q112C6_TRIEI Undecaprenyl pyrophosphate synthetase OS=... 171 3e-41 tr|B0CAY1|B0CAY1_ACAM1 Undecaprenyl diphosphate synthase OS=Acar... 171 3e-41 tr|B5W5Y4|B5W5Y4_SPIMA Undecaprenyl diphosphate synthase OS=Arth... 171 4e-41 tr|B4WRA7|B4WRA7_9SYNE Undecaprenyl diphosphate synthase OS=Syne... 170 6e-41
>tr|A9RXS2|A9RXS2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_120729 PE=3 SV=1 Length = 247
Score = 231 bits (589), Expect = 3e-59 Identities = 106/190 (55%), Positives = 143/190 (75%) Frame = +3
Query: 60 ELPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCEWGLAALT 239 +L LDA ++P+HVAIIMDGNSRWA+ RG+ + GHEAG +SLKE+V+L+ WG+ LT Sbjct: 4 QLAEELDASVMPKHVAIIMDGNSRWAERRGMPASMGHEAGVRSLKEVVKLAHTWGVEVLT 63
Query: 240 VFAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLPLQSLIHK 419 VFAFSTENW R ++E+ LM LF+NVL E+ +L KEN+ V +GD P+ L+ ++ Sbjct: 64 VFAFSTENWLRPKMEVDFLMMLFENVLKNELSSLAKENVRVHCMGDLTLLPVTLRDMVTT 123
Query: 420 VQQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLEDQLGTSWI 599 ++ T +NTGLKF +A SYSGRYDI ACQR+AA V+ G+L+ DITE +E++L TSW+ Sbjct: 124 IEDHTKHNTGLKFCIALSYSGRYDIANACQRLAARVETGELSSSDITEASIEEELKTSWL 183
Query: 600 GDIRNPDLLI 629 GD+RNPDLLI Sbjct: 184 GDVRNPDLLI 193
>tr|A9T0L2|A9T0L2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_190474 PE=3 SV=1 Length = 256
Score = 223 bits (568), Expect = 7e-57 Identities = 103/190 (54%), Positives = 140/190 (73%) Frame = +3
Query: 60 ELPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCEWGLAALT 239 ELP L+ LP+HVAIIMDGNSRWA+ RGL + GHEAG +SLKE+V+L+ WG+ LT Sbjct: 13 ELPEELNPSALPKHVAIIMDGNSRWAERRGLPASMGHEAGVRSLKEVVKLAHTWGIKVLT 72
Query: 240 VFAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLPLQSLIHK 419 VFAFSTENW R + E+ LM LF+NVL E+ L KEN+ V +GD + P L++++ Sbjct: 73 VFAFSTENWLRPKTEVDFLMLLFENVLKNELSILAKENVRVHCMGDLRSLPESLRNMVST 132
Query: 420 VQQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLEDQLGTSWI 599 + ++T +NTGLKF +A SYSGRYDI ACQR+AA V+ G+++ DI E +++++ TSW+ Sbjct: 133 LDERTKHNTGLKFCIALSYSGRYDITNACQRLAAKVEAGEMSSSDINEAVIDEEMKTSWL 192
Query: 600 GDIRNPDLLI 629 G+ RNPDLLI Sbjct: 193 GEARNPDLLI 202
>tr|A9RFW0|A9RFW0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_174410 PE=3 SV=1 Length = 253
Score = 222 bits (566), Expect = 1e-56 Identities = 105/190 (55%), Positives = 140/190 (73%) Frame = +3
Query: 60 ELPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCEWGLAALT 239 +LP LD +P+HVAIIMDGNSRWA+ RGL + GHEAG +SLKE+V+L+ WG+ L+ Sbjct: 10 QLPEELDVSKIPKHVAIIMDGNSRWAERRGLPASMGHEAGVRSLKEVVKLANTWGIKVLS 69
Query: 240 VFAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLPLQSLIHK 419 VFAFSTENW R + E+ LM LF+NVL +E+ +L KEN+ V +GD P L++L+ Sbjct: 70 VFAFSTENWLRPKAEVDFLMLLFENVLKDELSSLAKENVRVHCMGDLTLLPDSLKNLVSA 129
Query: 420 VQQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLEDQLGTSWI 599 + ++T NNTGLKF +A SYSGR DI ACQR+AA V+ G+L+ DITE E++L TSW+ Sbjct: 130 LDERTKNNTGLKFCIALSYSGRNDIANACQRLAAKVEAGELSSSDITETMFEEELKTSWL 189
Query: 600 GDIRNPDLLI 629 G+ R+PDLLI Sbjct: 190 GEERDPDLLI 199
>tr|Q94DE7|Q94DE7_ORYSJ Putative undecaprenyl pyrophosphate synthetase (Putative uncharacterized protein) (Os01g0857200 protein) OS=Oryza sativa subsp. japonica GN=P0683F02.7 PE=3 SV=1 Length = 295
Score = 191 bits (484), Expect = 4e-47 Identities = 99/190 (52%), Positives = 128/190 (67%), Gaps = 1/190 (0%) Frame = +3
Query: 63 LPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCEWGLAALTV 242 LP L A LPRHVA++MDGN+RWA RGL AAGHEAG ++L+E VRLS WG+ ALT Sbjct: 51 LPGCLRAESLPRHVAVVMDGNARWARARGLPSAAGHEAGRRALEETVRLSRAWGIRALTA 110
Query: 243 FAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLPLQSLIHKV 422 FAFS ENW R +VE+ LM+LF+ V+ + V ++E I +RVIGD+ R P+ LQ + + Sbjct: 111 FAFSNENWSRPKVEVDFLMRLFERVIHDSVAEFLREGIRLRVIGDSSRLPVSLQKIAREA 170
Query: 423 QQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLEDQLGTSWIG 602 ++ T NN+ L T+A SYSGR DIVQAC+++A VQ L +DI E D+L TS Sbjct: 171 EETTRNNSQLDLTLAISYSGRRDIVQACRKLAQKVQSKALAAEDIDEALFADELETSCAA 230
Query: 603 D-IRNPDLLI 629 D PDLLI Sbjct: 231 DEFPYPDLLI 240
>tr|B6TV95|B6TV95_MAIZE Undecaprenyl pyrophosphate synthetase OS=Zea mays PE=2 SV=1 Length = 287
Score = 185 bits (469), Expect = 2e-45 Identities = 96/191 (50%), Positives = 125/191 (65%), Gaps = 2/191 (1%) Frame = +3
Query: 63 LPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCEWGLAALTV 242 LP GL A LPRHVA++MDGNSRWA RGL AAGHEAG ++L+E+VRLS WG+ LT Sbjct: 42 LPGGLRAESLPRHVAVVMDGNSRWARARGLPSAAGHEAGRRALEEVVRLSRAWGVRTLTA 101
Query: 243 FAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLPLQSLIHKV 422 FAFS ENW R +VE+ LM F+ + E V ++E I +RVIGD+ R P+ LQ + Sbjct: 102 FAFSHENWSRPKVEVEFLMGQFERAIRESVAEFLREGIRLRVIGDSSRLPVSLQRTAREA 161
Query: 423 QQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLEDQLGTSWI- 599 ++ T NN+ L T+A SYSGR DIVQAC+ +A V+ L P+DI E +L TS Sbjct: 162 EEATRNNSQLDLTLAISYSGRRDIVQACRTLAQKVRDKLLEPEDIDESLFAGELETSHAN 221
Query: 600 -GDIRNPDLLI 629 ++ PDL+I Sbjct: 222 GNELPYPDLVI 232
>tr|B7K1S7|B7K1S7_SYNP8 Undecaprenyl diphosphate synthase OS=Synechococcus sp. (strain PCC 8801 / RF-1) GN=PCC8801_0128 PE=4 SV=1 Length = 249
Score = 184 bits (468), Expect = 3e-45 Identities = 95/190 (50%), Positives = 122/190 (64%) Frame = +3
Query: 60 ELPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCEWGLAALT 239 +LP LD LP HVA+IMDGN RWA RGL GH+ G +LK+++R +WG+ ALT Sbjct: 10 DLPTDLDYLRLPNHVAVIMDGNGRWAKRRGLPRIMGHQRGVDTLKDLLRCCKDWGVPALT 69
Query: 240 VFAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLPLQSLIHK 419 +AFSTENW R E+ LM LF+ VL E+ +++EN+ +R +G+ P LQ I + Sbjct: 70 AYAFSTENWGRPLDEVEFLMTLFERVLRRELREMMEENVRIRFVGNLAVLPPSLQEEIAR 129
Query: 420 VQQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLEDQLGTSWI 599 Q T NNTG+ FTVA +Y GR +IVQACQ +A VQQG LNP+DI E ED L T Sbjct: 130 SMQDTQNNTGIDFTVATNYGGRQEIVQACQAIATQVQQGLLNPQDIDESIFEDHLYTK-- 187
Query: 600 GDIRNPDLLI 629 I +PDLLI Sbjct: 188 -GIAHPDLLI 196
>tr|B2ITZ3|B2ITZ3_NOSP7 Undecaprenyl diphosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_F5991 PE=4 SV=1 Length = 249
Score = 184 bits (467), Expect = 4e-45 Identities = 90/191 (47%), Positives = 128/191 (67%) Frame = +3
Query: 57 RELPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCEWGLAAL 236 ++LP L LLP+HVA+IMDGN RWA +GL GH+ G +LK+++R +WG+ AL Sbjct: 9 QDLPTDLKRELLPQHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCQDWGIQAL 68
Query: 237 TVFAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLPLQSLIH 416 T +AFSTENW R Q E+ LM LFQ VL +E+ +V+EN++++ +G+ Q P LQ I Sbjct: 69 TAYAFSTENWKRPQEEVDFLMTLFQRVLRQELREMVEENVQIKFVGNLQALPRSLQQEIS 128
Query: 417 KVQQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLEDQLGTSW 596 + ++T +N G++F+VA +Y GR +I+QACQ +A VQQG L P +I E+ E L T+ Sbjct: 129 RSMEETKDNRGIRFSVATNYGGRQEILQACQAIAKQVQQGLLQPDEINEQVFESHLYTAG 188
Query: 597 IGDIRNPDLLI 629 I D PDLLI Sbjct: 189 ITD---PDLLI 196
>tr|B5X0P4|B5X0P4_ARATH At5g58770 OS=Arabidopsis thaliana PE=2 SV=1 Length = 310
Score = 184 bits (466), Expect = 5e-45 Identities = 91/198 (45%), Positives = 127/198 (64%) Frame = +3
Query: 36 FAVRPSHRELPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSC 215 F LP L A L+P+HVAIIMDGN RWA RGL GH AG ++LKEIV L Sbjct: 59 FTAAEEEETLPEELHAELMPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCG 118
Query: 216 EWGLAALTVFAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPL 395 +WG+ LTVFAFST+NW R ++EI L LF+ L E L K N+ + +IGD+ + P Sbjct: 119 KWGIQVLTVFAFSTDNWIRPRIEIDFLFSLFERSLKTEFQNLAKNNVRISIIGDSSKLPK 178
Query: 396 PLQSLIHKVQQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLE 575 L +I++V++ T NNT L+ VA YSG+YD++QAC+ +A V+ G++ ++I ER +E Sbjct: 179 SLLRVINEVEEVTKNNTRLQLIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDERLIE 238
Query: 576 DQLGTSWIGDIRNPDLLI 629 ++L T+ + PDLLI Sbjct: 239 EELETN-CTEFPYPDLLI 255
>tr|A8YKN9|A8YKN9_MICAE UppS protein OS=Microcystis aeruginosa PCC 7806 GN=uppS PE=3 SV=1 Length = 249
Score = 183 bits (465), Expect = 6e-45 Identities = 96/197 (48%), Positives = 132/197 (67%), Gaps = 1/197 (0%) Frame = +3
Query: 42 VRPS-HRELPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCE 218 V+PS ELP LD + LP+HVA+IMDGN RWA +RGL GH+ G +LK+++R E Sbjct: 3 VKPSLSPELPTDLDKNRLPQHVAVIMDGNGRWAKSRGLPRIMGHQRGVDALKDLLRCCGE 62
Query: 219 WGLAALTVFAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLP 398 WG+ ALT +AFSTENW R E+ LM LF+ VL E++ +++EN+++R IG+ P Sbjct: 63 WGIPALTAYAFSTENWGRPLEEVEFLMTLFERVLQRELEEMMQENVKIRFIGNLAALPES 122
Query: 399 LQSLIHKVQQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLED 578 L+ I K Q +T+ N+G++FTVAA+Y GR +IVQACQ +A VQQG ++P+ I E Sbjct: 123 LRREIAKSQAETSKNSGIQFTVAANYGGREEIVQACQAIARQVQQGLVSPEAIDESLFAQ 182
Query: 579 QLGTSWIGDIRNPDLLI 629 L T+ I NPDLLI Sbjct: 183 YLYTA---GIPNPDLLI 196
>tr|B4VWB4|B4VWB4_9CYAN Undecaprenyl diphosphate synthase OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_6791 PE=4 SV=1 Length = 246
Score = 182 bits (462), Expect = 1e-44 Identities = 89/191 (46%), Positives = 124/191 (64%) Frame = +3
Query: 57 RELPHGLDAHLLPRHVAIIMDGNSRWADTRGLSCAAGHEAGAKSLKEIVRLSCEWGLAAL 236 +ELP LD LP+HVA+IMDGN RWA RG+ GH G +LK+++R +WG+ AL Sbjct: 6 KELPSDLDQERLPKHVAVIMDGNGRWAKRRGIPRIMGHRRGVDTLKQLLRCCDDWGIQAL 65
Query: 237 TVFAFSTENWHRGQVEISILMQLFQNVLTEEVDTLVKENIEVRVIGDTQRFPLPLQSLIH 416 T +AFSTENW R E+ LM LF+ VL E+ +++EN+ ++ +G+ P LQ+ I Sbjct: 66 TAYAFSTENWGRPIEEVEFLMTLFERVLIRELKEMMEENVRIQFVGNLTALPQSLQNQIE 125
Query: 417 KVQQKTANNTGLKFTVAASYSGRYDIVQACQRVAANVQQGKLNPKDITERHLEDQLGTSW 596 + +T NNTG++FTVA +Y GR +I+QAC+ +A VQ G+L P+DI E L T+ Sbjct: 126 RAMTQTQNNTGIQFTVATNYGGREEILQACRTIATQVQHGQLQPEDIDEALFSRHLYTAN 185
Query: 597 IGDIRNPDLLI 629 IGD PDLLI Sbjct: 186 IGD---PDLLI 193
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