DK952067 |
Clone id |
TST38A01NGRL0013_B13 |
Library |
TST38 |
Length |
652 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_B13. 5' end sequence. |
Accession |
DK952067 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1035Contig1 |
Sequence |
GGATTGTGGAGTTTCTAATAAGGAAAAAGCTGAATGTGATCTCTGTTCATTTGACAAGCT CAAAGTCCATGGTGGGCATCCCTGGTGTTGCTTCTTATTTACGACAGCAGAGGCAGGGCC GTGATATTTACGTTCTGGGATCAGCAAATGTTGGAAAGTCAGCCTTCGTGAGTGCAATGC TTAAGGAGTTATCTAAACGAGACTTAGCTGCTACAGCTGCTCTGCGGCGTTTGCCCATTC AATCTGCAATGCCGGGCACCACGTTAGGTCCCATCGAAATCAAGGCTTTCTCATCAGGAG GGAGCATGTTTGACACCCCTGGCATTCACGTTCATCATCGAATGGCAGCTGTGATATCTC CGAGTGATTTGACATTGTTGGCCCCACGTCGCCAACTCCGGGGTTACCTTGTTGCACCAT CAATTTTTGCAAGGACCCAACAGACATCCTTTGATGCATTGGAGTCAGCAATTGTTGTAT CAGGAGATGAAGCACCAAACACCAACTGTCAGGTCTCCAGTACAACTGGTATGGAATTGC CAATGCTTTCAGATGTTGCAGGTGGGGCCACTGAAGATGAGATTAATCTGTCTGGAATGT CTGTCTTATGGGGAGGTTTTGTTAGGCTTGATGTAATCAAGGTTCCCCCTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6YPG5 |
Definition |
sp|Q6YPG5|NOS_ORYSJ Putative nitric oxide synthase OS=Oryza sativa subsp. japonica |
Align length |
216 |
Score (bit) |
172.0 |
E-value |
2.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952067|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_B13, 5' (652 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6YPG5|NOS_ORYSJ Putative nitric oxide synthase OS=Oryza sati... 172 2e-42 sp|Q66GP9|NOS1_ARATH Nitric oxide synthase 1 OS=Arabidopsis thal... 167 4e-41 sp|P54453|YQEH_BACSU Uncharacterized protein yqeH OS=Bacillus su... 85 4e-16 sp|Q11CN2|MNME_MESSB tRNA modification GTPase mnmE OS=Mesorhizob... 34 0.76 sp|A6TXE5|MNME_ALKMQ tRNA modification GTPase mnmE OS=Alkaliphil... 34 0.76 sp|Q9JJG9|CD014_MOUSE Uncharacterized protein C4orf14 homolog OS... 34 0.76 sp|Q32LB9|CD014_BOVIN Uncharacterized protein C4orf14 homolog OS... 33 0.99 sp|Q899S2|MNME_CLOTE tRNA modification GTPase mnmE OS=Clostridiu... 33 1.3 sp|Q8NC60|CD014_HUMAN Uncharacterized protein C4orf14 OS=Homo sa... 33 1.7 sp|Q0A4P0|ENGB_ALHEH Probable GTP-binding protein engB OS=Alkali... 32 2.2 sp|Q38WW3|ENGA_LACSS GTP-binding protein engA OS=Lactobacillus s... 32 2.9 sp|P62061|ARGJ_GEOSL Arginine biosynthesis bifunctional protein ... 32 2.9 sp|A5G169|MNME_ACICJ tRNA modification GTPase mnmE OS=Acidiphili... 32 3.8 sp|Q9KV18|RSGA_VIBCH Putative ribosome biogenesis GTPase rsgA OS... 31 4.9 sp|Q6LU45|ENGA_PHOPR GTP-binding protein engA OS=Photobacterium ... 31 4.9 sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16 OS=Asper... 31 5.0 sp|Q7MGZ6|RSGA1_VIBVY Putative ribosome biogenesis GTPase rsgA 1... 30 8.4 sp|Q8DCV7|RSGA1_VIBVU Putative ribosome biogenesis GTPase rsgA 1... 30 8.4 sp|B0K5N4|MNME_THEPX tRNA modification GTPase mnmE OS=Thermoanae... 30 8.4 sp|B0K8H9|MNME_THEP3 tRNA modification GTPase mnmE OS=Thermoanae... 30 8.4 sp|Q0ATU5|MNME_SYNWW tRNA modification GTPase mnmE OS=Syntrophom... 30 8.4 sp|Q746Q3|MNME_GEOSL tRNA modification GTPase mnmE OS=Geobacter ... 30 8.4 sp|B0S3V2|MNME_FINM2 tRNA modification GTPase mnmE OS=Finegoldia... 30 8.4 sp|A5N451|MNME_CLOK5 tRNA modification GTPase mnmE OS=Clostridiu... 30 8.4 sp|Q88CI7|GCST_PSEPK Aminomethyltransferase OS=Pseudomonas putid... 30 8.4 sp|A4IXH0|ENGA_FRATW GTP-binding protein engA OS=Francisella tul... 30 8.4 sp|Q5NFD2|ENGA_FRATT GTP-binding protein engA OS=Francisella tul... 30 8.4 sp|Q0BND2|ENGA_FRATO GTP-binding protein engA OS=Francisella tul... 30 8.4 sp|A0Q534|ENGA_FRATN GTP-binding protein engA OS=Francisella tul... 30 8.4 sp|Q2A515|ENGA_FRATH GTP-binding protein engA OS=Francisella tul... 30 8.4
>sp|Q6YPG5|NOS_ORYSJ Putative nitric oxide synthase OS=Oryza sativa subsp. japonica GN=Os02g0104700 PE=3 SV=1 Length = 547
Score = 172 bits (435), Expect = 2e-42 Identities = 93/216 (43%), Positives = 127/216 (58%) Frame = +3
Query: 3 IVEFLIRKKLNVISVHLTSSKSMVGIPGVASYLRQQRQGRDIYVLGSANVGKSAFVSAML 182 +VE +++KKLNV+SVHLTSSKS+VG+ GV S ++Q+++GRD+Y+LGSANVGKSAF+SAML Sbjct: 233 VVEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKGRDVYILGSANVGKSAFISAML 292
Query: 183 KELSKXXXXXXXXXXXXPIQSAMPGTTLGPIEIKAFSSGGSMFDTPGIHVHHRMAAVISP 362 + ++ PIQSA+PGTTLGPI+I+AF GG ++DTPG+H+HHR AAVI Sbjct: 293 RTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHLHHRQAAVIHA 352
Query: 363 SDLTLLAPRRQLRGYLVAPSIFARTQQTSFDALESAIVVSGDEAPNTNCQVSSTTGMELP 542 DL LAP+ +LR C ++ T Sbjct: 353 DDLPSLAPQSRLR---------------------------------ARCFPANDT----- 374
Query: 543 MLSDVAGGATEDEINLSGMSVLWGGFVRLDVIKVPP 650 ++ LSG S+ WGG VR+DV+K P Sbjct: 375 ------------DVGLSGNSLFWGGLVRIDVVKALP 398
>sp|Q66GP9|NOS1_ARATH Nitric oxide synthase 1 OS=Arabidopsis thaliana GN=NOS1 PE=1 SV=1 Length = 561
Score = 167 bits (423), Expect = 4e-41 Identities = 90/216 (41%), Positives = 127/216 (58%) Frame = +3
Query: 3 IVEFLIRKKLNVISVHLTSSKSMVGIPGVASYLRQQRQGRDIYVLGSANVGKSAFVSAML 182 +VE +RKKLNV+SVHLTSSKS+ G+ GVAS ++++++GRD+Y+LG+ANVGKSAF++A+L Sbjct: 241 VVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGRDVYILGAANVGKSAFINALL 300
Query: 183 KELSKXXXXXXXXXXXXPIQSAMPGTTLGPIEIKAFSSGGSMFDTPGIHVHHRMAAVISP 362 K +++ PIQSA+PGTTLGPI+I AF G ++DTPG+H+HHR AAV+ Sbjct: 301 KTMAERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGEKLYDTPGVHLHHRQAAVVHS 360
Query: 363 SDLTLLAPRRQLRGYLVAPSIFARTQQTSFDALESAIVVSGDEAPNTNCQVSSTTGMELP 542 DL LAP+ +LRG SFD S + +P Sbjct: 361 DDLPALAPQNRLRG-------------QSFDI--STLPTQSSSSPKGE------------ 393
Query: 543 MLSDVAGGATEDEINLSGMSVLWGGFVRLDVIKVPP 650 +L+G + WGG VR+D++K P Sbjct: 394 --------------SLNGYTFFWGGLVRIDILKALP 415
>sp|P54453|YQEH_BACSU Uncharacterized protein yqeH OS=Bacillus subtilis GN=yqeH PE=4 SV=1 Length = 366
Score = 84.7 bits (208), Expect = 4e-16 Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 2/158 (1%) Frame = +3
Query: 30 LNVISVHLTSSKSMVGIPGVASYLRQQRQGRDIYVLGSANVGKSAFVSAMLKELSKXXXX 209 L + V L S+ GI V + R G+D+YV+G NVGKS F++ ++KE+S Sbjct: 130 LKPVDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGCTNVGKSTFINRIIKEVSGEEDI 189
Query: 210 XXXXXXXXPIQSAMPGTTLGPIEIKAFSSGGSMFDTPGIHVHHRMAAVISPSDLTLLAPR 389 S PGTTL IEI G S++DTPGI +H+MA ++ DL +L+P+ Sbjct: 190 I--------TTSQFPGTTLDAIEI-PLDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPK 240
Query: 390 RQLRGYLVAPSIFARTQQTS--FDALESAIVVSGDEAP 497 ++L+ P F Q + F L VSG+ +P Sbjct: 241 KELK-----PRTFQLNDQQTLYFGGLARFDYVSGERSP 273
>sp|Q11CN2|MNME_MESSB tRNA modification GTPase mnmE OS=Mesorhizobium sp. (strain BNC1) GN=mnmE PE=3 SV=1 Length = 442
Score = 33.9 bits (76), Expect = 0.76 Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 14/176 (7%) Frame = +3
Query: 111 RQGRDIYVLGSANVGKSAFVSAMLKELSKXXXXXXXXXXXXPIQSAMPGTTLGPIEIKAF 290 R G I +LG+ N GKS+ ++A+ + I + PGTT +E+ Sbjct: 219 RDGFQIVILGAPNAGKSSLLNALARR-------------DVAIVTEEPGTTRDILEVSLD 265
Query: 291 SSGGS--MFDTPGIHVHHRMAAVISPSDLTLLAPRRQLRGYLVAPSIFARTQQTSFDALE 464 G + DT GI R AA + L R LR A + T+ E Sbjct: 266 IDGTKVVLADTAGI----REAA----GRVEALGIERSLRRANEADLVLLLEDVTNPSTPE 317
Query: 465 ------------SAIVVSGDEAPNTNCQVSSTTGMELPMLSDVAGGATEDEINLSG 596 A +++ A + NC +S+ TG+ L L ++ A+ N +G Sbjct: 318 VPQGKPVITIGNKADLITDTPAASYNCLISAKTGLGLDRLMELISQASAGYSNFAG 373
>sp|A6TXE5|MNME_ALKMQ tRNA modification GTPase mnmE OS=Alkaliphilus metalliredigens (strain QYMF) GN=mnmE PE=3 SV=1 Length = 461
Score = 33.9 bits (76), Expect = 0.76 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = +3
Query: 111 RQGRDIYVLGSANVGKSAFVSAMLKELSKXXXXXXXXXXXXPIQSAMPGTTLGPIEIKAF 290 R+G + ++G NVGKS+ ++A+LKE I + +PGTT IE + F Sbjct: 221 REGLNTVIVGKPNVGKSSLLNALLKE-------------SRAIVTEVPGTTRDAIE-EHF 266
Query: 291 SSGG---SMFDTPGI 326 + G ++ DT GI Sbjct: 267 NIRGIPLNLIDTAGI 281
>sp|Q9JJG9|CD014_MOUSE Uncharacterized protein C4orf14 homolog OS=Mus musculus GN=MNCb-4931 PE=2 SV=1 Length = 693
Score = 33.9 bits (76), Expect = 0.76 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = +3
Query: 21 RKKLNVISVHLTSSKSMVGIPGVASYL-RQQRQGRDIYVLGSANVGKSAFVSAMLKELSK 197 R + V V L S+K+ G+ + S L R R D+Y++G+ N GKS + +L+ S Sbjct: 307 RSRTVVKDVRLISAKTGYGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLE--SD 364
Query: 198 XXXXXXXXXXXXPIQSAMPGTTL 266 S PGTTL Sbjct: 365 YCTAKGSEAIDRATISPWPGTTL 387
>sp|Q32LB9|CD014_BOVIN Uncharacterized protein C4orf14 homolog OS=Bos taurus PE=2 SV=1 Length = 694
Score = 33.5 bits (75), Expect = 0.99 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +3
Query: 45 VHLTSSKSMVGIPGVASYL-RQQRQGRDIYVLGSANVGKSAFVSAMLKELSKXXXXXXXX 221 V L S+K+ G+ + S L R R D+Y++GS N GKS + +L+ S Sbjct: 314 VRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLLE--SDYCIAKGAE 371
Query: 222 XXXXPIQSAMPGTTL 266 S PGTTL Sbjct: 372 AIDRATISPWPGTTL 386
>sp|Q899S2|MNME_CLOTE tRNA modification GTPase mnmE OS=Clostridium tetani GN=mnmE PE=3 SV=1 Length = 459
Score = 33.1 bits (74), Expect = 1.3 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +3
Query: 111 RQGRDIYVLGSANVGKSAFVSAMLKELSKXXXXXXXXXXXXPIQSAMPGTTLGPIE 278 R+G D+ ++G NVGKS+ ++A+L E I + +PGTT IE Sbjct: 221 REGLDVVIVGKPNVGKSSLLNALLSE-------------KRAIVTEIPGTTRDVIE 263
>sp|Q8NC60|CD014_HUMAN Uncharacterized protein C4orf14 OS=Homo sapiens GN=C4orf14 PE=1 SV=2 Length = 698
Score = 32.7 bits (73), Expect = 1.7 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = +3
Query: 36 VISVHLTSSKSMVGIPGVASYL-RQQRQGRDIYVLGSANVGKSAFVSAMLKELSKXXXXX 212 V V L S+K+ G+ + S L R R D+Y++G+ N GKS + +L+ S Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLE--SDYCTAK 367
Query: 213 XXXXXXXPIQSAMPGTTL 266 S PGTTL Sbjct: 368 GSEAIDRATISPWPGTTL 385
>sp|Q0A4P0|ENGB_ALHEH Probable GTP-binding protein engB OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=engB PE=3 SV=1 Length = 206
Score = 32.3 bits (72), Expect = 2.2 Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 3/117 (2%) Frame = +3
Query: 114 QGRDIYVLGSANVGKSAFVSAMLKELSKXXXXXXXXXXXXPIQSAMPGTTLGPIEIKAFS 293 QGR++ G +NVGKS+ ++ + + S S PG T I + + Sbjct: 24 QGREVAFAGRSNVGKSSAINTLTNQKSLAR------------TSKTPGRT-QLINVFPIT 70
Query: 294 SGGSMFDTPGIHVHHRMAAVISPSDLTL---LAPRRQLRGYLVAPSIFARTQQTSFD 455 ++ D PG AAV D L LA RR LRG ++ + R T FD Sbjct: 71 DEAALVDLPGYGYAKVPAAVRRRWDQVLPEYLAGRRALRGVVLVMDL--RHPLTDFD 125
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LMS1 |
Definition |
tr|B8LMS1|B8LMS1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
215 |
Score (bit) |
183.0 |
E-value |
9.0e-45 |
Report |
|