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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952008
Clone id TST38A01NGRL0012_O24
Library
Length 592
Definition Adiantum capillus-veneris PHY2 mRNA for phytochrome 2, partial cds
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CTCTGATAGGTTCCCTTTCGGTTTCTTTGACCGATATGGTAAATATGCAGAGGCGCTTCT
GATCGCCAATAAGAGAACTGATAGTGATGGAGCAATCACTGGCGTGTTCTGTTTTCTTCA
CACAGCGAGTCCGGAGTTGCAGCAAGCTTTGCAAGTTCAGAAGCGATCTGCAAGGACTGC
CCTAGATAGACTAAAAGAGGTTGCTTACATGAAACAAGAGATTAGGAATCCTTTGTATGG
GATCGTCTTCACAAGGAAGCTGCTGGATAATACAAATCTTACAGATGAGCAGAAGCAAAT
TATGGAGACCAGTTCTTTGTGTGAAAAACAGCTGCAAAATATCCTGGATGAGGACAACTT
CGAAAAGCTTGATCAAGGAAATGTGGATTTGGATACGTTAGAGTTCACCATGGGCACAGT
GATGGATGCTGTGATCAGCCAAGGCATGATCAGATCAAGAGAGAAAGGACTACAACTTAT
AAGAGAAACTCATGTTGAGATTAAAAACACACGGCTTTTTGGAGATCAATATCGATTGCA
GCAAGTGTTAGCTGACTTTCTCACCACAGCAATACGATTCACCTCTTCTTCA
■■Homology search results ■■ -
sp_hit_id Q40762
Definition sp|Q40762|PHY_PICAB Phytochrome OS=Picea abies
Align length 196
Score (bit) 265.0
E-value 2.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952008|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_O24, 5'
         (592 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40762|PHY_PICAB Phytochrome OS=Picea abies PE=2 SV=1              265   2e-70
sp|Q01549|PHY1_SELMA Phytochrome 1 OS=Selaginella martensii GN=P...   258   1e-68
sp|Q39557|PHY2_CERPU Phytochrome 2 OS=Ceratodon purpureus GN=PHY...   248   1e-65
sp|Q41046|PHY_PINSY Phytochrome OS=Pinus sylvestris PE=2 SV=1         248   2e-65
sp|P36505|PHY1_PHYPA Phytochrome 1 OS=Physcomitrella patens GN=P...   236   6e-62
sp|P33529|PHY_MOUSC Phytochrome OS=Mougeotia scalaris GN=PHY PE=...   216   5e-56
sp|P34094|PHYB_SOLTU Phytochrome B OS=Solanum tuberosum GN=PHYB ...   207   4e-53
sp|Q9ZS62|PHYB1_SOLLC Phytochrome B1 OS=Solanum lycopersicum GN=...   206   9e-53
sp|P29130|PHYB_TOBAC Phytochrome B OS=Nicotiana tabacum GN=PHYB ...   205   1e-52
sp|Q10MG9|PHYB_ORYSJ Phytochrome B OS=Oryza sativa subsp. japoni...   204   2e-52
sp|A2XFW2|PHYB_ORYSI Phytochrome B OS=Oryza sativa subsp. indica...   204   2e-52
sp|P42496|PHY_ADICA Phytochrome 1 OS=Adiantum capillus-veneris G...   203   5e-52
sp|P14712|PHYA_ARATH Phytochrome A OS=Arabidopsis thaliana GN=PH...   200   5e-51
sp|P30733|PHYA_SOLTU Phytochrome A OS=Solanum tuberosum GN=PHYA ...   199   9e-51
sp|P42499|PHYB_SOYBN Phytochrome B OS=Glycine max GN=PHYB PE=3 SV=1   197   3e-50
sp|P15001|PHYA_PEA Phytochrome A OS=Pisum sativum GN=PHYA PE=3 SV=1   196   7e-50
sp|P93527|PHYB_SORBI Phytochrome B OS=Sorghum bicolor GN=PHYB PE...   195   2e-49
sp|P93673|PHYA_LATSA Phytochrome type A OS=Lathyrus sativus GN=P...   194   2e-49
sp|P14713|PHYB_ARATH Phytochrome B OS=Arabidopsis thaliana GN=PH...   194   4e-49
sp|P33530|PHYA1_TOBAC Phytochrome A1 OS=Nicotiana tabacum GN=PHY...   193   6e-49
sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1   192   1e-48
sp|P42497|PHYD_ARATH Phytochrome D OS=Arabidopsis thaliana GN=PH...   191   2e-48
sp|P06592|PHYA_CUCPE Phytochrome A OS=Cucurbita pepo GN=PHYA PE=...   187   3e-47
sp|Q10CQ8|PHYC_ORYSJ Phytochrome C OS=Oryza sativa subsp. japoni...   186   8e-47
sp|A2XM23|PHYC_ORYSI Phytochrome C OS=Oryza sativa subsp. indica...   186   8e-47
sp|P93528|PHYC_SORBI Phytochrome C OS=Sorghum bicolor GN=PHYC PE...   184   3e-46
sp|O49934|PHYA_POPTM Phytochrome A OS=Populus tremuloides GN=PHY...   166   6e-41
sp|P55004|PHYE_IPONI Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1   166   8e-41
sp|P14714|PHYC_ARATH Phytochrome C OS=Arabidopsis thaliana GN=PH...   161   3e-39
sp|P06594|PHYA4_AVESA Phytochrome A type 4 OS=Avena sativa GN=PH...   159   1e-38

>sp|Q40762|PHY_PICAB Phytochrome OS=Picea abies PE=2 SV=1
          Length = 1136

 Score =  265 bits (676), Expect = 2e-70
 Identities = 124/196 (63%), Positives = 169/196 (86%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +++FPF FFDR+GK  EALL ANKRTD++G ITGVFCFLH  S ELQQALQVQ+ + + A
Sbjct: 845  TEKFPFSFFDRHGKNTEALLSANKRTDAEGIITGVFCFLHVTSTELQQALQVQRMAEQAA 904

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
            +DRLKE+AY++QEIRNPLYGI+FTRKL+++T+L++EQKQI++TS+LC++QL  +LD+ + 
Sbjct: 905  MDRLKELAYIRQEIRNPLYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDADL 964

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT+EFT+GTV+DAV+SQGMI SREKGLQLIR++  EIK   L+GDQ RLQ
Sbjct: 965  ESIEDGYLELDTIEFTLGTVLDAVVSQGMILSREKGLQLIRDSPEEIKTMCLYGDQLRLQ 1024

Query: 542  QVLADFLTTAIRFTSS 589
            Q+L++FL  A+RF++S
Sbjct: 1025 QILSNFLINALRFSTS 1040


>sp|Q01549|PHY1_SELMA Phytochrome 1 OS=Selaginella martensii GN=PHY1
            PE=3 SV=1
          Length = 1134

 Score =  258 bits (660), Expect = 1e-68
 Identities = 127/197 (64%), Positives = 161/197 (81%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +++FPF FFDR GKY EALL A KR D++G+ITGVFCFLH AS ELQQAL VQ+ + + A
Sbjct: 833  TEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVA 892

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
            L +LKE+AY++QEI+NPLYGI+FTR L++ T+L+++QKQ +ET ++CEKQ++ ILD+ + 
Sbjct: 893  LSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDL 952

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT EF MGTVMDAVISQGMI S+EK LQLIRET  EIK   L+GDQ RLQ
Sbjct: 953  ESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQ 1012

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  AIRFT SS
Sbjct: 1013 QVLADFLLNAIRFTPSS 1029


>sp|Q39557|PHY2_CERPU Phytochrome 2 OS=Ceratodon purpureus GN=PHY2
            PE=3 SV=1
          Length = 1121

 Score =  248 bits (634), Expect = 1e-65
 Identities = 123/197 (62%), Positives = 159/197 (80%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D+F F F +R GK+ EALL  NKRT++DG ITGVFCFL  AS ELQQAL VQ+ + + A
Sbjct: 825  TDKFSFSFCNREGKFVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVA 884

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
            + +LKE+AY++QEI+NPL GI FTR+LL++T+L+D+QKQ ++TS++CE+QLQ +L++ + 
Sbjct: 885  IAKLKELAYIRQEIKNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDL 944

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT EF MGTVMDAVISQGM  SREKGLQ+IRET  EI   RLFGDQ RLQ
Sbjct: 945  ESIEDGYLELDTAEFEMGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQ 1004

Query: 542  QVLADFLTTAIRFTSSS 592
            QVL+DFL  AIRFT SS
Sbjct: 1005 QVLSDFLINAIRFTPSS 1021


>sp|Q41046|PHY_PINSY Phytochrome OS=Pinus sylvestris PE=2 SV=1
          Length = 1131

 Score =  248 bits (632), Expect = 2e-65
 Identities = 116/195 (59%), Positives = 156/195 (80%)
 Frame = +2

Query: 5    DRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTAL 184
            ++FPF FFD+ GKY EALL ANKRTD+DG ITG FCF   AS ELQ AL+VQ++  +   
Sbjct: 836  EKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFFRIASSELQHALEVQRQQEKKCF 895

Query: 185  DRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNFE 364
             RLKE+AY++QEI+NPLYG++FTRKLL+ T+L+D+QKQ +ETS++CE+Q+Q ++D+ + E
Sbjct: 896  ARLKELAYIRQEIKNPLYGMMFTRKLLEETDLSDDQKQFVETSAVCERQMQKVMDDMDLE 955

Query: 365  KLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQQ 544
             L+ G ++LDT EF +GTV+DAV+SQGMI  REKGLQLIRE   E+K  RL+GD+ ++QQ
Sbjct: 956  SLEDGYMELDTAEFILGTVIDAVVSQGMIVLREKGLQLIREIPGEVKTMRLYGDEVKIQQ 1015

Query: 545  VLADFLTTAIRFTSS 589
            +LADFL   +RFT S
Sbjct: 1016 ILADFLLNVLRFTPS 1030


>sp|P36505|PHY1_PHYPA Phytochrome 1 OS=Physcomitrella patens GN=PHY1
            PE=2 SV=1
          Length = 1132

 Score =  236 bits (602), Expect = 6e-62
 Identities = 115/196 (58%), Positives = 154/196 (78%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D+F F FFDR GKY + LL  NKRT++DG ITGVFCFL  AS ELQQAL+VQ+ + + A
Sbjct: 827  TDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVFCFLQIASSELQQALKVQRATEKVA 886

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
            + +LKE+AY+ +EI+NPL G+ FTR+LL++T+L+D+Q+Q ++TS++CE+QLQ  L++ + 
Sbjct: 887  VAKLKELAYIVREIKNPLCGLTFTRQLLEDTDLSDDQQQFLDTSAVCEQQLQKSLNDMDL 946

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT EF MGTVM+AVISQGM  SREKGLQ+ RET  EI   RL GDQ RLQ
Sbjct: 947  ESIEDGYLELDTAEFEMGTVMNAVISQGMTTSREKGLQIFRETPREINTMRLLGDQIRLQ 1006

Query: 542  QVLADFLTTAIRFTSS 589
            QVL+DFL   +RFT S
Sbjct: 1007 QVLSDFLLNTVRFTPS 1022


>sp|P33529|PHY_MOUSC Phytochrome OS=Mougeotia scalaris GN=PHY PE=2
            SV=2
          Length = 1124

 Score =  216 bits (551), Expect = 5e-56
 Identities = 107/197 (54%), Positives = 150/197 (76%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D+FPF F+DR GK  E LL  +KR +S+G +TGVFCFLHTAS ELQQAL VQK + R A
Sbjct: 827  TDKFPFTFYDRSGKIVEVLLTTSKRCNSEGVVTGVFCFLHTASSELQQALTVQKAAERVA 886

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              + KE+AY++QEI+NPL GI F R  +++T L+++QKQ++ETS+ CEKQL+ IL + + 
Sbjct: 887  EVKAKELAYIRQEIQNPLDGIHFARSFMEHTVLSEDQKQLIETSATCEKQLRRILADMDL 946

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
              +++G ++L+T EF+M TVM++V+SQGMI+S +K LQL  +T  + K+  +FGDQ RLQ
Sbjct: 947  ASIEKGYLELETGEFSMATVMNSVVSQGMIQSTQKNLQLYCDTPPDFKSLSVFGDQVRLQ 1006

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  A++FT  S
Sbjct: 1007 QVLADFLLNAVQFTPPS 1023


>sp|P34094|PHYB_SOLTU Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3
            SV=2
          Length = 1130

 Score =  207 bits (526), Expect = 4e-53
 Identities = 100/196 (51%), Positives = 142/196 (72%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D+FPF FFDR GKY +ALL ANKR + +G   G FCF+  ASPELQQAL+VQ++  +  
Sbjct: 835  TDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKC 894

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              ++KE+AY+ QEI++PL GI FT  LL+ TNLT+ QKQ +ETS+ CE+Q+  I+ + + 
Sbjct: 895  YSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDL 954

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G++ L+  +F +G+V+DAV+SQ M+  REKG+QLIR+   EIK   + GDQ R+Q
Sbjct: 955  ENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQ 1014

Query: 542  QVLADFLTTAIRFTSS 589
            QVLADFL   +R+  S
Sbjct: 1015 QVLADFLLNMVRYAPS 1030


>sp|Q9ZS62|PHYB1_SOLLC Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1
            PE=2 SV=1
          Length = 1131

 Score =  206 bits (523), Expect = 9e-53
 Identities = 99/196 (50%), Positives = 142/196 (72%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D+FPF FFDR GKY +ALL ANKR + +G   G FCF+  ASPELQQAL+VQ++  +  
Sbjct: 836  TDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKC 895

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              ++KE+AY+ QE+++PL GI FT  LL+ TNLT+ QKQ +ETS+ CE+Q+  I+ + + 
Sbjct: 896  YSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVDL 955

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G++ L+  +F +G+V+DAV+SQ M+  REKG+QLIR+   EIK   + GDQ R+Q
Sbjct: 956  ENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQ 1015

Query: 542  QVLADFLTTAIRFTSS 589
            QVLADFL   +R+  S
Sbjct: 1016 QVLADFLLNMVRYAPS 1031


>sp|P29130|PHYB_TOBAC Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2
            SV=2
          Length = 1132

 Score =  205 bits (522), Expect = 1e-52
 Identities = 99/196 (50%), Positives = 142/196 (72%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D+FPF FFDR GKY +ALL ANKR + +G I G FCF+  ASPELQQAL+VQ++  +  
Sbjct: 837  TDKFPFSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKC 896

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              ++KE+AY+ QEI++PL GI FT  LL+ T+LT+ QKQ +ETS+ CE+Q+  I+ + + 
Sbjct: 897  YSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDL 956

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G++ L+  EF +G+V+DAV+SQ M+  RE+ +QLIR+   EIK   + GDQ R+Q
Sbjct: 957  ENIEDGSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQ 1016

Query: 542  QVLADFLTTAIRFTSS 589
            QVLADFL   +R+  S
Sbjct: 1017 QVLADFLLNMVRYAPS 1032


>sp|Q10MG9|PHYB_ORYSJ Phytochrome B OS=Oryza sativa subsp. japonica
            GN=PHYB PE=2 SV=1
          Length = 1171

 Score =  204 bits (520), Expect = 2e-52
 Identities = 98/192 (51%), Positives = 139/192 (72%)
 Frame = +2

Query: 5    DRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTAL 184
            ++FPF FFD+ GKY +ALL AN R+  DG   G FCFL  ASPELQQA ++Q+   +   
Sbjct: 876  EKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCY 935

Query: 185  DRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNFE 364
             R+KE+AY+ QEI+NPL GI FT  LL+ T+L D+Q+Q +ETS+ CEKQ+  I+ + + +
Sbjct: 936  ARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQ 995

Query: 365  KLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQQ 544
             ++ G++ L+  EF++G+VM+AV+SQ MI+ RE+ LQLIR+   EIK    +GDQYR+QQ
Sbjct: 996  SIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQ 1055

Query: 545  VLADFLTTAIRF 580
            VL DFL + +RF
Sbjct: 1056 VLCDFLLSMVRF 1067
tr_hit_id O82148
Definition tr|O82148|O82148_ADICA Phytochrome 2 OS=Adiantum capillus-veneris
Align length 197
Score (bit) 387.0
E-value 1.0e-106
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952008|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_O24, 5'
         (592 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O82148|O82148_ADICA Phytochrome 2 OS=Adiantum capillus-veneri...   387   e-106
tr|Q40951|Q40951_PSINU Phytochrome (Fragment) OS=Psilotum nudum ...   331   2e-89
tr|B0LI01|B0LI01_CERPU Phytochrome-4 OS=Ceratodon purpureus PE=4...   267   4e-70
tr|A9T4N3|A9T4N3_PHYPA Phytochrome 4 OS=Physcomitrella patens su...   265   1e-69
tr|A9S4A1|A9S4A1_PHYPA Phytochrome 5a OS=Physcomitrella patens s...   264   2e-69
tr|Q8GV72|Q8GV72_PHYPA Phytochrome OS=Physcomitrella patens GN=p...   264   3e-69
tr|A9RK23|A9RK23_PHYPA Phytochrome 5c OS=Physcomitrella patens s...   263   4e-69
tr|Q9AVP3|Q9AVP3_MARPA Phytochrome OS=Marchantia paleacea var. d...   263   6e-69
tr|Q8GV70|Q8GV70_PHYPA Phytochrome OS=Physcomitrella patens GN=p...   263   7e-69
tr|A9TUP7|A9TUP7_PHYPA Phytochrome 2 OS=Physcomitrella patens su...   262   1e-68
tr|A9SLL8|A9SLL8_PHYPA Phytochrome 5b3 OS=Physcomitrella patens ...   260   5e-68
tr|Q8GV68|Q8GV68_CERPU Phytochrome OS=Ceratodon purpureus GN=phy...   255   2e-66
tr|Q7GD77|Q7GD77_ADICA Phytochrome 2 (Fragment) OS=Adiantum capi...   250   4e-65
tr|O24446|O24446_CERPU Phytochrome photoreceptor OS=Ceratodon pu...   248   1e-64
tr|Q8GV69|Q8GV69_PHYPA Phytochrome OS=Physcomitrella patens GN=p...   242   1e-62
tr|A9SID1|A9SID1_PHYPA Phytochrome 3 OS=Physcomitrella patens su...   242   1e-62
tr|Q8GV71|Q8GV71_PHYPA Phytochrome OS=Physcomitrella patens GN=p...   242   1e-62
tr|A9THP5|A9THP5_PHYPA Phytochrome 1 OS=Physcomitrella patens su...   242   1e-62
tr|Q40263|Q40263_9VIRI Phytochrome OS=Mesotaenium caldariorum PE...   234   2e-60
tr|Q9FSD5|Q9FSD5_PINSY Phytochrome N (Fragment) OS=Pinus sylvest...   229   9e-59
tr|Q3V8G6|Q3V8G6_MOUSC Phytochrome OS=Mougeotia scalaris GN=PHY1...   216   6e-55
tr|A1IIA2|A1IIA2_LOTJA Phytochrome b OS=Lotus japonicus GN=phyb ...   212   1e-53
tr|A7Q8Q6|A7Q8Q6_VITVI Chromosome chr5 scaffold_64, whole genome...   211   3e-53
tr|Q9FPQ3|Q9FPQ3_POPTR Phytochrome B1 OS=Populus trichocarpa GN=...   208   2e-52
tr|Q2L9Z2|Q2L9Z2_SOLTU Phytochrome B OS=Solanum tuberosum PE=2 SV=1   207   5e-52
tr|A7Q305|A7Q305_VITVI Chromosome chr12 scaffold_47, whole genom...   206   6e-52
tr|Q9FPQ2|Q9FPQ2_POPTR Phytochrome B2 OS=Populus trichocarpa GN=...   206   1e-51
tr|B8AMI0|B8AMI0_ORYSI Putative uncharacterized protein OS=Oryza...   204   2e-51
tr|A3AH88|A3AH88_ORYSJ Putative uncharacterized protein OS=Oryza...   204   2e-51
tr|O24117|O24117_NICPL Phytochrome B OS=Nicotiana plumbaginifoli...   204   3e-51

>tr|O82148|O82148_ADICA Phytochrome 2 OS=Adiantum capillus-veneris
            GN=PHY2 PE=2 SV=1
          Length = 1140

 Score =  387 bits (994), Expect = e-106
 Identities = 197/197 (100%), Positives = 197/197 (100%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA
Sbjct: 849  SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 908

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
            LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF
Sbjct: 909  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 968

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ
Sbjct: 969  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 1028

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFLTTAIRFTSSS
Sbjct: 1029 QVLADFLTTAIRFTSSS 1045


>tr|Q40951|Q40951_PSINU Phytochrome (Fragment) OS=Psilotum nudum
            GN=psphy PE=2 SV=1
          Length = 794

 Score =  331 bits (849), Expect = 2e-89
 Identities = 165/197 (83%), Positives = 182/197 (92%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            SDRFP GFFDR GKY EALLIANKRTD  GAITGVFCFLH AS E+QQALQVQKRSARTA
Sbjct: 500  SDRFPLGFFDRQGKYVEALLIANKRTDGAGAITGVFCFLHIASAEVQQALQVQKRSARTA 559

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
            LD+LKEVAYM+QEIRNPLYGI+FTR+LL+ TNL++EQKQI++TS++CEKQL  ILDEDNF
Sbjct: 560  LDKLKEVAYMRQEIRNPLYGIMFTRRLLEGTNLSEEQKQIIDTSAVCEKQLHQILDEDNF 619

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E LD GN+DLDT+EFTMGTVMDAVISQGMIRSREKGLQLIRET V+IKN RL+GDQ RLQ
Sbjct: 620  ENLDHGNIDLDTIEFTMGTVMDAVISQGMIRSREKGLQLIRETPVDIKNMRLYGDQLRLQ 679

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFLTTA+RFTSSS
Sbjct: 680  QVLADFLTTAVRFTSSS 696


>tr|B0LI01|B0LI01_CERPU Phytochrome-4 OS=Ceratodon purpureus PE=4 SV=1
          Length = 1125

 Score =  267 bits (682), Expect = 4e-70
 Identities = 129/197 (65%), Positives = 165/197 (83%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D++PF FFDR GK+ EALL ANKRTD+DG ITGVFCFLH ASPEL QAL VQ+ + + A
Sbjct: 829  TDKYPFSFFDRNGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVA 888

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              +LKE+AY++QEI+NPLYGI+FTR L+++T+L+DEQKQ M+TS++CE+QL+ ILD+ + 
Sbjct: 889  FAKLKELAYIRQEIKNPLYGIMFTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDL 948

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++L+T EF MG++MDAV+SQGM+ SREKGLQLIRET  EIKN  LFGDQ RLQ
Sbjct: 949  ESIEDGYLELETAEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIKNMCLFGDQVRLQ 1008

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  A+RFT SS
Sbjct: 1009 QVLADFLLNAVRFTPSS 1025


>tr|A9T4N3|A9T4N3_PHYPA Phytochrome 4 OS=Physcomitrella patens subsp.
            patens GN=PHY4 PE=4 SV=1
          Length = 1126

 Score =  265 bits (677), Expect = 1e-69
 Identities = 128/197 (64%), Positives = 164/197 (83%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +DRFPF FFDR GKY +ALL  NKRTD++G+ITGVFCFLHT S EL QAL VQ+ + + A
Sbjct: 830  TDRFPFSFFDRQGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVA 889

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              +LKE+AY++QEI+NPLYGI+FTR L+++T+L+++Q+Q +ETS++CE+QL+ +LD+ + 
Sbjct: 890  FAKLKELAYIRQEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDL 949

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT EF MGTVMDAV+SQGMI SREKGLQLIRET  EIKN  LFGDQ RLQ
Sbjct: 950  ESIEDGYLELDTNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQ 1009

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  A+RFT SS
Sbjct: 1010 QVLADFLLNAVRFTPSS 1026


>tr|A9S4A1|A9S4A1_PHYPA Phytochrome 5a OS=Physcomitrella patens subsp.
            patens GN=PHY5a PE=4 SV=1
          Length = 1123

 Score =  264 bits (675), Expect = 2e-69
 Identities = 127/197 (64%), Positives = 165/197 (83%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D++PF FFDR GK+ EALL ANKRTD+DG ITGVFCFLH ASPEL QAL VQ+ + + A
Sbjct: 827  TDKYPFSFFDRQGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVA 886

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              +LKE+AY++QEI+NPLYGI+FTR L+++T+L+D+QKQ M+TS++CE+QL+ ILD+ + 
Sbjct: 887  FAKLKELAYIRQEIKNPLYGIMFTRNLMEDTDLSDDQKQFMDTSAVCERQLRKILDDMDL 946

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++L+T EF MG++MDAV+SQGM+ SREKGLQLIRET  EIK+  LFGDQ RLQ
Sbjct: 947  ESIEDGYLELETAEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIKDMCLFGDQVRLQ 1006

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  A+RFT SS
Sbjct: 1007 QVLADFLLNAVRFTPSS 1023


>tr|Q8GV72|Q8GV72_PHYPA Phytochrome OS=Physcomitrella patens GN=phy4
            PE=4 SV=1
          Length = 1126

 Score =  264 bits (674), Expect = 3e-69
 Identities = 127/197 (64%), Positives = 164/197 (83%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +DRFPF FFDR GKY +ALL  NKRTD++G+ITGVFCFLHT S EL QAL VQ+ + + A
Sbjct: 830  TDRFPFSFFDRQGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVA 889

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              +LKE+AY++QEI+NPLYGI+FTR L+++T+L+++Q+Q +ETS++CE+QL+ +LD+ + 
Sbjct: 890  FAKLKELAYIRQEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDL 949

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT EF MGTVMDAV+SQGMI SREKGLQLIRET  EIKN  LFGDQ RLQ
Sbjct: 950  ESIEDGYLELDTNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQ 1009

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  A++FT SS
Sbjct: 1010 QVLADFLLNAVKFTPSS 1026


>tr|A9RK23|A9RK23_PHYPA Phytochrome 5c OS=Physcomitrella patens subsp.
            patens GN=PHY5c PE=4 SV=1
          Length = 1124

 Score =  263 bits (673), Expect = 4e-69
 Identities = 128/197 (64%), Positives = 164/197 (83%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +D+FPF FFDR GK+ EALL ANKRTD+D  ITGVFCFLHTASPEL QAL VQ+ + + A
Sbjct: 828  TDKFPFSFFDRQGKFVEALLTANKRTDADDYITGVFCFLHTASPELLQALTVQRATEKVA 887

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              +LKE+AY++QEI+NPLYGI+FTR L+++T+L++EQKQ M+TS++CE+QL+ ILD+ + 
Sbjct: 888  FAKLKELAYIRQEIKNPLYGIMFTRNLMEDTDLSEEQKQFMDTSAVCERQLRKILDDMDL 947

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++L+T EF MG++MDAV+SQGMI SREKGLQLIRET  EIK   LFGDQ RLQ
Sbjct: 948  ESIEDGYLELETAEFDMGSMMDAVVSQGMITSREKGLQLIRETPREIKGMCLFGDQVRLQ 1007

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLAD+L  A+RFT SS
Sbjct: 1008 QVLADYLLNAVRFTPSS 1024


>tr|Q9AVP3|Q9AVP3_MARPA Phytochrome OS=Marchantia paleacea var.
            diptera GN=PhyMpd PE=2 SV=1
          Length = 1126

 Score =  263 bits (672), Expect = 6e-69
 Identities = 132/197 (67%), Positives = 161/197 (81%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            S++FPF FFDR GK+ EALL ANKRTDS+GA TGVFCFL  AS EL QAL VQ+ + + A
Sbjct: 830  SEKFPFAFFDRQGKFVEALLTANKRTDSEGAFTGVFCFLQIASMELLQALTVQRATEKVA 889

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              +LKE+AY++QEI+NPLYGI+FTR L+++TNLT+EQKQ +ETS+LCE+QL+ ILD+ + 
Sbjct: 890  FSKLKELAYIRQEIKNPLYGIMFTRNLVEDTNLTEEQKQFIETSALCERQLRRILDDMDL 949

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT EF MGTVMDAVISQGMI SREKGLQLI +T  + KN  LFGDQ RLQ
Sbjct: 950  ESIEDGYLELDTAEFIMGTVMDAVISQGMITSREKGLQLIWDTPRDTKNLCLFGDQVRLQ 1009

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  AIRFT SS
Sbjct: 1010 QVLADFLLNAIRFTPSS 1026


>tr|Q8GV70|Q8GV70_PHYPA Phytochrome OS=Physcomitrella patens GN=phy2
            PE=4 SV=1
          Length = 1130

 Score =  263 bits (671), Expect = 7e-69
 Identities = 128/197 (64%), Positives = 163/197 (82%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +DRFPF FFDR GKY + LL  NKRTD++G+ITGVFCFLHT S EL QAL VQ+ + + A
Sbjct: 830  TDRFPFSFFDRQGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVA 889

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              +LKE+AY++QEI+NPLYGIVFTR L+++T+L+ +Q+Q++ETS++CE+QL+ ILD+ + 
Sbjct: 890  FAKLKELAYIRQEIKNPLYGIVFTRNLMEDTDLSVDQRQLVETSAVCERQLRKILDDLDL 949

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT EF MGTVMDAV+SQGMI SREKGLQLIRET  EIKN  L+GDQ RLQ
Sbjct: 950  ESIEDGYLELDTTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQ 1009

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  A+RFT SS
Sbjct: 1010 QVLADFLLNAVRFTPSS 1026


>tr|A9TUP7|A9TUP7_PHYPA Phytochrome 2 OS=Physcomitrella patens subsp.
            patens GN=PHY2 PE=4 SV=1
          Length = 1130

 Score =  262 bits (669), Expect = 1e-68
 Identities = 128/197 (64%), Positives = 162/197 (82%)
 Frame = +2

Query: 2    SDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTA 181
            +DRFPF FFDR GKY + LL  NKRTD++G+ITGVFCFLHT S EL QAL VQ+ + + A
Sbjct: 830  TDRFPFSFFDRQGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVA 889

Query: 182  LDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNF 361
              +LKE+AY++QEI+NPLYGIVFTR L+++T+L+ +Q+Q +ETS++CE+QL+ ILD+ + 
Sbjct: 890  FAKLKELAYIRQEIKNPLYGIVFTRNLMEDTDLSVDQRQFVETSAVCERQLRKILDDLDL 949

Query: 362  EKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQ 541
            E ++ G ++LDT EF MGTVMDAV+SQGMI SREKGLQLIRET  EIKN  L+GDQ RLQ
Sbjct: 950  ESIEDGYLELDTTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQ 1009

Query: 542  QVLADFLTTAIRFTSSS 592
            QVLADFL  A+RFT SS
Sbjct: 1010 QVLADFLLNAVRFTPSS 1026