DK952006
Clone id TST38A01NGRL0012_O22
Library
Length 203
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_O22. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
GTGCTGGATATCACACCGAATGTTCGTCGCTGCTTGATGATAAGCCGAATTACCTCCTAC
AACCCCATGACAAAATCTTTTCTTCTCTCCTAAAGGTTTGCGCTCACTCTGAATAAATTG
CTATCACGTGAAACTTATTCTTCACCAGCTCATGATTCTTCGATTGGAAATTGATGTTTT
CTTTAGAATCACTTTGATTGACA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952006|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_O22, 5'
(203 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A7HZF1
Definition tr|A7HZF1|A7HZF1_CAMHC YjeF-related protein OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)
Align length 35
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952006|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_O22, 5'
(203 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7HZF1|A7HZF1_CAMHC YjeF-related protein OS=Campylobacter hom... 33 5.4
tr|Q63IF0|Q63IF0_BURPS Putative transporter protein OS=Burkholde... 33 7.1
tr|Q62DQ2|Q62DQ2_BURMA Major facilitator family transporter OS=B... 33 7.1
tr|Q3JJ70|Q3JJ70_BURP1 Major facilitator family transporter OS=B... 33 7.1
tr|A3P987|A3P987_BURP0 Transporter, major facilitator family OS=... 33 7.1
tr|A3NNQ5|A3NNQ5_BURP6 Major facilitator family transporter OS=B... 33 7.1
tr|A3MBI6|A3MBI6_BURM7 Major facilitator family transporter OS=B... 33 7.1
tr|A2S0T2|A2S0T2_BURM9 Major facilitator family transporter OS=B... 33 7.1
tr|A1UYV7|A1UYV7_BURMS Major facilitator family transporter OS=B... 33 7.1
tr|B7CPX2|B7CPX2_BURPS Transporter, major facilitator family OS=... 33 7.1
tr|B2HAH5|B2HAH5_BURPS Transporter, major facilitator family OS=... 33 7.1
tr|B1H9U1|B1H9U1_BURPS Transporter, major facilitator family OS=... 33 7.1
tr|A9K7B3|A9K7B3_BURMA Major facilitator family transporter OS=B... 33 7.1
tr|A8KDT3|A8KDT3_BURPS Transporter, major facilitator family OS=... 33 7.1
tr|A8EMN3|A8EMN3_BURPS Transporter, major facilitator family OS=... 33 7.1
tr|A5XW63|A5XW63_BURMA Major facilitator family transporter OS=B... 33 7.1
tr|A5TNP4|A5TNP4_BURMA Major facilitator family transporter OS=B... 33 7.1
tr|A5JA78|A5JA78_BURMA Major facilitator family transporter OS=B... 33 7.1
tr|A4LGM8|A4LGM8_BURPS Transporter, major facilitator family OS=... 33 7.1

>tr|A7HZF1|A7HZF1_CAMHC YjeF-related protein OS=Campylobacter
hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 /
CH001A) GN=CHAB381_0020 PE=4 SV=1
Length = 490

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3

Query: 9 YHTECSSLLDDKPNYLLQPHDKIFSSLLKVCAHSE 113
Y E LL N +L PH K F SLLK+C E
Sbjct: 343 YKDELLELLQTNKNMVLTPHPKEFGSLLKICGIGE 377


>tr|Q63IF0|Q63IF0_BURPS Putative transporter protein OS=Burkholderia
pseudomallei GN=BPSS2123 PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297


>tr|Q62DQ2|Q62DQ2_BURMA Major facilitator family transporter
OS=Burkholderia mallei GN=BMAA0376 PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297


>tr|Q3JJ70|Q3JJ70_BURP1 Major facilitator family transporter
OS=Burkholderia pseudomallei (strain 1710b)
GN=BURPS1710b_A1226 PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297


>tr|A3P987|A3P987_BURP0 Transporter, major facilitator family
OS=Burkholderia pseudomallei (strain 1106a)
GN=BURPS1106A_A2868 PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297


>tr|A3NNQ5|A3NNQ5_BURP6 Major facilitator family transporter
OS=Burkholderia pseudomallei (strain 668)
GN=BURPS668_A2985 PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297


>tr|A3MBI6|A3MBI6_BURM7 Major facilitator family transporter
OS=Burkholderia mallei (strain NCTC 10247)
GN=BMA10247_A0419 PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297


>tr|A2S0T2|A2S0T2_BURM9 Major facilitator family transporter
OS=Burkholderia mallei (strain NCTC 10229)
GN=BMA10229_1753 PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297


>tr|A1UYV7|A1UYV7_BURMS Major facilitator family transporter
OS=Burkholderia mallei (strain SAVP1) GN=BMASAVP1_1566
PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297


>tr|B7CPX2|B7CPX2_BURPS Transporter, major facilitator family
OS=Burkholderia pseudomallei 576 GN=BUC_7188 PE=4 SV=1
Length = 444

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1

Query: 37 MISRITSYNPMTKSFLLS*RFALTLNKLLSR 129
MIS +T+Y M+KSF+L FA+TL +LLS+
Sbjct: 267 MISYVTTYLGMSKSFILDCLFAVTLIQLLSQ 297