DK951934 |
Clone id |
TST38A01NGRL0012_L19 |
Library |
TST38 |
Length |
603 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_L19. 5' end sequence. |
Accession |
DK951934 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL437Contig1 |
Sequence |
GCTGAAATGGCCCTTAAGTTACCCTGACAACGATGATTTTATTTGTCCACAGCAGGCAAT TGAGGTGCTACATGAAGTTACGCAGGGAAATGCTATTATCGCAACAGGTGTTGGACAGCA TCAAATGTGGGCAGCACAGTGGTTTAAATATGATAAGCCAAGGCAATGGTTATCGTCAGG TGGCCTCGGAGCTATGGGGTTTGGTCTACCTGCTGCGTTGGGGGCTGCAGCAGCAAATCC TGGTGTGCCTGTGGTGGACATAGATGGAGATGGAAGCTTTCTAATGAATGTCCAAGAATT GGCCACTATTTGCGTCGAGCAGTTGCCGGTGAAGATTATGATCTTAAATAATCAACATCT TGGGATGGTTGTGCAGTGGGAGGATAGGTTTTACAAGGGAAATAGAGCGCATACTTATCT GGGGGACCCAAGGGATGAAGAAGCTATTTTCCCCGATTTCTTGAAGATGGCAGAGGGATG CAAGGTTCCGTCTTCTCGTGTGATGAAGAAGTCTGACTTGAGAAGCGCAATAGAGTTGAT GATAAATACACCAGGGCCATATTTATTGGATGTTATTGTGCCCCATCAAGAGCATGTGCT TCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P09342 |
Definition |
sp|P09342|ILVB1_TOBAC Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum |
Align length |
200 |
Score (bit) |
258.0 |
E-value |
1.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951934|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_L19, 5' (603 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P09342|ILVB1_TOBAC Acetolactate synthase 1, chloroplastic OS=... 258 1e-68 sp|P09114|ILVB2_TOBAC Acetolactate synthase 2, chloroplastic OS=... 258 2e-68 sp|P27819|ILVB3_BRANA Acetolactate synthase 3, chloroplastic OS=... 253 4e-67 sp|P27818|ILVB1_BRANA Acetolactate synthase 1, chloroplastic OS=... 252 1e-66 sp|P17597|ILVB_ARATH Acetolactate synthase, chloroplastic OS=Ara... 250 3e-66 sp|Q6K2E8|ILVB1_ORYSJ Acetolactate synthase 1, chloroplastic OS=... 248 2e-65 sp|Q41768|ILVB1_MAIZE Acetolactate synthase 1, chloroplastic OS=... 248 2e-65 sp|Q41769|ILVB2_MAIZE Acetolactate synthase 2, chloroplastic OS=... 242 9e-64 sp|P14874|ILVB2_BRANA Acetolactate synthase 2, chloroplastic OS=... 236 9e-62 sp|Q7XKQ8|ILVB2_ORYSJ Probable acetolactate synthase 2, chloropl... 227 4e-59 sp|O19929|ILVB_CYACA Acetolactate synthase large subunit OS=Cyan... 128 3e-29 sp|P0A622|ILVB_MYCTU Acetolactate synthase OS=Mycobacterium tube... 122 2e-27 sp|P0A623|ILVB_MYCBO Acetolactate synthase OS=Mycobacterium bovi... 122 2e-27 sp|P36620|ILVB_SCHPO Acetolactate synthase, mitochondrial OS=Sch... 120 7e-27 sp|P42463|ILVB_CORGL Acetolactate synthase large subunit OS=Cory... 119 9e-27 sp|P37251|ILVB_BACSU Acetolactate synthase large subunit OS=Baci... 119 1e-26 sp|P00892|ILVG_ECOLI Acetolactate synthase isozyme 2 large subun... 118 3e-26 sp|Q1XDF6|ILVB_PORYE Acetolactate synthase large subunit OS=Porp... 118 3e-26 sp|Q59498|ILVB_MYCAV Acetolactate synthase OS=Mycobacterium aviu... 117 3e-26 sp|O33112|ILVB_MYCLE Acetolactate synthase OS=Mycobacterium lepr... 116 1e-25 sp|P40811|ILVI_SALTY Acetolactate synthase isozyme 3 large subun... 114 5e-25 sp|P07342|ILVB_YEAST Acetolactate synthase catalytic subunit, mi... 114 5e-25 sp|P00893|ILVI_ECOLI Acetolactate synthase isozyme 3 large subun... 113 6e-25 sp|Q9RQ65|ILVI_BUCSC Acetolactate synthase large subunit OS=Buch... 113 6e-25 sp|P45261|ILVI_HAEIN Acetolactate synthase large subunit OS=Haem... 112 2e-24 sp|Q57725|ILVB_METJA Probable acetolactate synthase large subuni... 111 2e-24 sp|Q89AP7|ILVI_BUCBP Acetolactate synthase large subunit OS=Buch... 110 7e-24 sp|O78518|ILVB_GUITH Acetolactate synthase large subunit OS=Guil... 109 9e-24 sp|P69684|ILVB_PORUM Acetolactate synthase large subunit OS=Porp... 108 2e-23 sp|P69683|ILVB_PORPU Acetolactate synthase large subunit OS=Porp... 108 2e-23
>sp|P09342|ILVB1_TOBAC Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1 Length = 667
Score = 258 bits (660), Expect = 1e-68 Identities = 128/200 (64%), Positives = 149/200 (74%) Frame = +2
Query: 2 LKWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSX 181 +K PL++ D I PQ AI+VL E+T GNAII+TGVGQHQMWAAQ++KY KPRQWL+S Sbjct: 446 VKHPLNFKTFGDAIPPQYAIQVLDELTNGNAIISTGVGQHQMWAAQYYKYRKPRQWLTSG 505
Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHL 361 DIDGDGSF+MNVQELATI VE LPVKIM+LNNQHL Sbjct: 506 GLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHL 565
Query: 362 GMVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELM 541 GMVVQWEDRFYK NRAHTYLG+P +E IFP+ LK AE C VP++RV + DLR+AI+ M Sbjct: 566 GMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKM 625
Query: 542 INTPGPYLLDVIVPHQEHVL 601 ++TPGPYLLDVIVPHQEHVL Sbjct: 626 LDTPGPYLLDVIVPHQEHVL 645
>sp|P09114|ILVB2_TOBAC Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1 Length = 664
Score = 258 bits (659), Expect = 2e-68 Identities = 127/200 (63%), Positives = 150/200 (75%) Frame = +2
Query: 2 LKWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSX 181 +K+PL++ D I PQ AI+VL E+T G+AII+TGVGQHQMWAAQ++KY KPRQWL+S Sbjct: 443 VKYPLNFKTFGDAIPPQYAIQVLDELTNGSAIISTGVGQHQMWAAQYYKYRKPRQWLTSG 502
Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHL 361 DIDGDGSF+MNVQELATI VE LPVKIM+LNNQHL Sbjct: 503 GLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHL 562
Query: 362 GMVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELM 541 GMVVQWEDRFYK NRAHTYLG+P +E IFP+ LK AE C VP++RV + DLR+AI+ M Sbjct: 563 GMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKM 622
Query: 542 INTPGPYLLDVIVPHQEHVL 601 ++TPGPYLLDVIVPHQEHVL Sbjct: 623 LDTPGPYLLDVIVPHQEHVL 642
>sp|P27819|ILVB3_BRANA Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1 Length = 652
Score = 253 bits (647), Expect = 4e-67 Identities = 125/199 (62%), Positives = 146/199 (73%) Frame = +2
Query: 5 KWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSXX 184 K+PLS+ + I PQ AI+VL E+TQG AII+TGVGQHQMWAAQ++KY KPRQWLSS Sbjct: 432 KFPLSFKTFGEAIPPQYAIQVLDELTQGKAIISTGVGQHQMWAAQFYKYRKPRQWLSSSG 491
Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLG 364 DIDGDGSF+MNVQELATI VE LPVKI++LNNQHLG Sbjct: 492 LGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLG 551
Query: 365 MVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMI 544 MV+QWEDRFYK NRAHTYLGDP E IFP+ L+ A C +P++RV KK +LR AI+ M+ Sbjct: 552 MVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTML 611
Query: 545 NTPGPYLLDVIVPHQEHVL 601 +TPGPYLLDVI PHQEHVL Sbjct: 612 DTPGPYLLDVICPHQEHVL 630
>sp|P27818|ILVB1_BRANA Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1 Length = 655
Score = 252 bits (643), Expect = 1e-66 Identities = 123/199 (61%), Positives = 146/199 (73%) Frame = +2
Query: 5 KWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSXX 184 K+PLS+ + I PQ AI++L E+T+G AII+TGVGQHQMWAAQ++KY KPRQWLSS Sbjct: 435 KFPLSFKTFGEAIPPQYAIQILDELTEGKAIISTGVGQHQMWAAQFYKYRKPRQWLSSSG 494
Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLG 364 DIDGDGSF+MNVQELATI VE LPVKI++LNNQHLG Sbjct: 495 LGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLG 554
Query: 365 MVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMI 544 MV+QWEDRFYK NRAHTYLGDP E IFP+ L+ A C +P++RV KK +LR AI+ M+ Sbjct: 555 MVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTML 614
Query: 545 NTPGPYLLDVIVPHQEHVL 601 +TPGPYLLDVI PHQEHVL Sbjct: 615 DTPGPYLLDVICPHQEHVL 633
>sp|P17597|ILVB_ARATH Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1 Length = 670
Score = 250 bits (639), Expect = 3e-66 Identities = 122/199 (61%), Positives = 145/199 (72%) Frame = +2
Query: 5 KWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSXX 184 K+PLS+ + I PQ AI+VL E+T G AII+TGVGQHQMWAAQ++ Y KPRQWLSS Sbjct: 450 KFPLSFKTFGEAIPPQYAIKVLDELTDGKAIISTGVGQHQMWAAQFYNYKKPRQWLSSGG 509
Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLG 364 DIDGDGSF+MNVQELATI VE LPVK+++LNNQHLG Sbjct: 510 LGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKVLLLNNQHLG 569
Query: 365 MVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMI 544 MV+QWEDRFYK NRAHT+LGDP E+ IFP+ L A C +P++RV KK+DLR AI+ M+ Sbjct: 570 MVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTML 629
Query: 545 NTPGPYLLDVIVPHQEHVL 601 +TPGPYLLDVI PHQEHVL Sbjct: 630 DTPGPYLLDVICPHQEHVL 648
>sp|Q6K2E8|ILVB1_ORYSJ Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1 Length = 644
Score = 248 bits (633), Expect = 2e-65 Identities = 120/199 (60%), Positives = 146/199 (73%) Frame = +2
Query: 5 KWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSXX 184 ++PL Y + I PQ AI+VL E+T+G AIIATGVGQHQMWAAQ++ Y +PRQWLSS Sbjct: 424 EFPLGYKTFGEEIPPQYAIQVLDELTKGEAIIATGVGQHQMWAAQYYTYKRPRQWLSSAG 483
Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLG 364 DIDGDGSFLMN+QELA I +E LPVK+M+LNNQHLG Sbjct: 484 LGAMGFGLPAAAGASVANPGVTVVDIDGDGSFLMNIQELALIRIENLPVKVMVLNNQHLG 543
Query: 365 MVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMI 544 MVVQWEDRFYK NRAHTYLG+P E I+PDF+ +A+G +P+ RV KKS++R+AI+ M+ Sbjct: 544 MVVQWEDRFYKANRAHTYLGNPECESEIYPDFVTIAKGFNIPAVRVTKKSEVRAAIKKML 603
Query: 545 NTPGPYLLDVIVPHQEHVL 601 TPGPYLLD+IVPHQEHVL Sbjct: 604 ETPGPYLLDIIVPHQEHVL 622
>sp|Q41768|ILVB1_MAIZE Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1 Length = 638
Score = 248 bits (632), Expect = 2e-65 Identities = 118/199 (59%), Positives = 147/199 (73%) Frame = +2
Query: 5 KWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSXX 184 ++PL Y +++ I PQ AI+VL E+T+G AII TGVGQHQMWAAQ++ Y +PRQWLSS Sbjct: 418 EFPLGYKTSNEEIQPQYAIQVLDELTKGEAIIGTGVGQHQMWAAQYYTYKRPRQWLSSAG 477
Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLG 364 DIDGDGSFLMNVQELA I +E LPVK+ +LNNQHLG Sbjct: 478 LGAMGFGLPAAAGASVANPGVTVVDIDGDGSFLMNVQELAMIRIENLPVKVFVLNNQHLG 537
Query: 365 MVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMI 544 MVVQWEDRFYK NRAHTYLG+P +E I+PDF+ +A+G +P+ RV KK+++R+AI+ M+ Sbjct: 538 MVVQWEDRFYKANRAHTYLGNPENESEIYPDFVTIAKGFNIPAVRVTKKNEVRAAIKKML 597
Query: 545 NTPGPYLLDVIVPHQEHVL 601 TPGPYLLD+IVPHQEHVL Sbjct: 598 ETPGPYLLDIIVPHQEHVL 616
>sp|Q41769|ILVB2_MAIZE Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1 Length = 638
Score = 242 bits (618), Expect = 9e-64 Identities = 116/199 (58%), Positives = 145/199 (72%) Frame = +2
Query: 5 KWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSXX 184 ++PL Y ++ I PQ AI+VL E+T+G AIIATGVGQHQMWAAQ++ Y +PRQWLSS Sbjct: 418 EFPLGYKIFNEEIQPQYAIQVLDELTKGEAIIATGVGQHQMWAAQYYTYKRPRQWLSSAG 477
Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLG 364 DIDGDGSFLMN+QELA I +E LPVK+ +LNNQHLG Sbjct: 478 LGAMGFGLPAAAGAAVANPGVTVVDIDGDGSFLMNIQELAMIRIENLPVKVFVLNNQHLG 537
Query: 365 MVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMI 544 MVVQWEDRFYK NRAHT+LG+P +E I+PDF+ +A+G +P+ RV KKS++ +AI+ M+ Sbjct: 538 MVVQWEDRFYKANRAHTFLGNPENESEIYPDFVAIAKGFNIPAVRVTKKSEVHAAIKKML 597
Query: 545 NTPGPYLLDVIVPHQEHVL 601 PGPYLLD+IVPHQEHVL Sbjct: 598 EAPGPYLLDIIVPHQEHVL 616
>sp|P14874|ILVB2_BRANA Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1 Length = 637
Score = 236 bits (601), Expect = 9e-62 Identities = 111/200 (55%), Positives = 142/200 (71%) Frame = +2
Query: 2 LKWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSX 181 LK+PL Y + I PQ AI++L E+T G AII TGVGQHQMWAAQ++++ KPRQWLSS Sbjct: 424 LKFPLRYKTFGEEIPPQYAIQLLDELTDGKAIITTGVGQHQMWAAQFYRFKKPRQWLSSG 483
Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHL 361 DIDGDGSF+MN+QELATI VE LPVK++++NNQHL Sbjct: 484 GLGAMGFGLPAAMGAAIANPGAVVVDIDGDGSFIMNIQELATIRVENLPVKVLLINNQHL 543
Query: 362 GMVVQWEDRFYKGNRAHTYLGDPRDEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELM 541 GMV+QWED FY NRA ++LGDP + EA+FPD L A C +P++RV ++ DLR AI+ M Sbjct: 544 GMVLQWEDHFYAANRADSFLGDPANPEAVFPDMLLFAASCGIPAARVTRREDLREAIQTM 603
Query: 542 INTPGPYLLDVIVPHQEHVL 601 ++TPGP+LLDV+ PHQ+HVL Sbjct: 604 LDTPGPFLLDVVCPHQDHVL 623
>sp|Q7XKQ8|ILVB2_ORYSJ Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2 Length = 663
Score = 227 bits (578), Expect = 4e-59 Identities = 112/202 (55%), Positives = 139/202 (68%), Gaps = 2/202 (0%) Frame = +2
Query: 2 LKWPLSYPDNDDFICPQQAIEVLHEVTQGNAIIATGVGQHQMWAAQWFKYDKPRQWLSSX 181 +++PL Y + I PQ AI+VL EVT G AI+ATGVGQHQMWA Q + Y +PRQWLSS Sbjct: 440 VEFPLGYRTFGEEIPPQYAIQVLDEVTNGEAIVATGVGQHQMWATQHYTYRRPRQWLSSA 499
Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHL 361 DIDGDGS LMN+QELA + VE LPVK+M+LNNQHL Sbjct: 500 GLGAMGFGLPAAAGAAVANPGATVVDIDGDGSLLMNIQELAMVRVEDLPVKVMVLNNQHL 559
Query: 362 GMVVQWEDRFYKGNRAHTYLGDPRDEEA--IFPDFLKMAEGCKVPSSRVMKKSDLRSAIE 535 GMVVQWEDRFY NRAHTYLG+P ++PDF+ +A G +P++RV +K ++R+A+E Sbjct: 560 GMVVQWEDRFYDANRAHTYLGNPAANGGGEVYPDFVTIAGGFGIPAARVTRKGEVRAAVE 619
Query: 536 LMINTPGPYLLDVIVPHQEHVL 601 M+ PGPYLLDV+VPHQEHVL Sbjct: 620 EMMAAPGPYLLDVVVPHQEHVL 641
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LK99 |
Definition |
tr|B8LK99|B8LK99_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
199 |
Score (bit) |
273.0 |
E-value |
7.0e-72 |
Report |
|