DK951922 |
Clone id |
TST38A01NGRL0012_L05 |
Library |
TST38 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_L05. 5' end sequence. |
Accession |
DK951922 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1216Contig1 |
Sequence |
GAGCACTCTTACAAGAAGCACTCAGATCCAATCGGCAGGCATGATAGGACGAAGCAAGCA GTACGTTAATGTTGTGGACAAGCCCCTTGGCAAGGGCAAGCTTGAGGTTAGCTTAAATGC ATTTGCATTTCTGTTTTCAGAGATGGTGCAGTACAATCAAACTCGTGTAGACAACATTGC TGAACTTGAGCACAGGCTTGAGGATGCGGGTTATGGTGTTGGCCTCAGAATGTTAGAGTT GCTTTGTCATAGAGAGAAGGGAAATAGAAGAGAGGTAAGGTTGCTTGGCATTCTATCTTT TGTTCACAGCACCCTATGGAAGTCTCTTTTCGGGAAGGTTGCAGACTCTTTGGAAAAAGG AACTGAAAATGAAGATGAGTACATGATCAGCGAAAAAGAGCTACTTGTTAACAGGTTTAT TTCTGTTCCCAAGGATATGGGAGCTTTTAATTGTGGGGCATATGTTGCAGGCATAGTAAA GGGTGTGCTTGATGGCTCGGGCTTCCCAGCAAGGGTTACAGCACACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54YG5 |
Definition |
sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum |
Align length |
158 |
Score (bit) |
206.0 |
E-value |
6.0e-53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NUE7 |
Definition |
tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
161 |
Score (bit) |
288.0 |
E-value |
1.0e-76 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951922|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_L05, 5' (527 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea... 288 1e-76 tr|B4FGI9|B4FGI9_MAIZE Putative uncharacterized protein OS=Zea m... 279 5e-74 tr|A9TS83|A9TS83_PHYPA Predicted protein OS=Physcomitrella paten... 279 5e-74 tr|Q5N9C8|Q5N9C8_ORYSJ cDNA clone:002-182-B01, full insert seque... 278 1e-73 tr|B8A8C6|B8A8C6_ORYSI Putative uncharacterized protein OS=Oryza... 278 1e-73 tr|A9PJ15|A9PJ15_POPJC Putative uncharacterized protein OS=Popul... 277 2e-73 tr|B7FMS6|B7FMS6_MEDTR Putative uncharacterized protein OS=Medic... 277 3e-73 tr|Q9FGU1|Q9FGU1_ARATH Gb|AAD34459.1 (SPP30-like protein) (At5g5... 276 4e-73 tr|A9PAN6|A9PAN6_POPTR Putative uncharacterized protein OS=Popul... 276 6e-73 tr|A7PFS6|A7PFS6_VITVI Chromosome chr11 scaffold_14, whole genom... 275 8e-73 tr|Q9XFA1|Q9XFA1_SOLCH SPP30 OS=Solanum chacoense GN=SPP30 PE=2 ... 273 4e-72 tr|A2ZX31|A2ZX31_ORYSJ Putative uncharacterized protein OS=Oryza... 210 3e-53 tr|B6NQI2|B6NQI2_BRAFL Putative uncharacterized protein OS=Branc... 180 3e-44 tr|A7SRF2|A7SRF2_NEMVE Predicted protein OS=Nematostella vectens... 180 3e-44 tr|B8BSU9|B8BSU9_THAPS Predicted protein OS=Thalassiosira pseudo... 178 1e-43 tr|B5Y485|B5Y485_PHATR Predicted protein OS=Phaeodactylum tricor... 172 1e-41 tr|Q17H04|Q17H04_AEDAE Putative uncharacterized protein OS=Aedes... 170 4e-41 tr|Q7PDE6|Q7PDE6_ANOGA AGAP012080-PA OS=Anopheles gambiae GN=AGA... 170 5e-41 tr|Q5TMY9|Q5TMY9_ANOGA AGAP012083-PA (Fragment) OS=Anopheles gam... 170 5e-41 tr|B0WI08|B0WI08_CULQU Putative uncharacterized protein OS=Culex... 167 4e-40 tr|B5XBX4|B5XBX4_SALSA Trafficking protein particle complex subu... 166 7e-40 tr|B5XDA0|B5XDA0_SALSA Trafficking protein particle complex subu... 166 9e-40 tr|B5X6I2|B5X6I2_SALSA Trafficking protein particle complex subu... 166 9e-40 tr|B5X5W6|B5X5W6_SALSA Trafficking protein particle complex subu... 166 9e-40 tr|A8J2W3|A8J2W3_CHLRE Component of TRAPP complex OS=Chlamydomon... 164 3e-39 tr|B6K0U0|B6K0U0_SCHJP TRAPP complex subunit Trs31 OS=Schizosacc... 164 3e-39 tr|Q7K2Q8|Q7K2Q8_DROME CG10153 OS=Drosophila melanogaster GN=CG1... 163 4e-39 tr|B4QFY4|B4QFY4_DROSI GD25660 OS=Drosophila simulans GN=GD25660... 163 4e-39 tr|B4P7N8|B4P7N8_DROYA GE12291 OS=Drosophila yakuba GN=GE12291 P... 163 4e-39 tr|B4HRP2|B4HRP2_DROSE GM20187 OS=Drosophila sechellia GN=GM2018... 163 4e-39
>tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 228
Score = 288 bits (737), Expect = 1e-76 Identities = 141/161 (87%), Positives = 153/161 (95%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +GR+KQY N ++K LGKGK EVSLNAFAFLFSE+VQYNQTRVDNIAELE RLEDAGYGVG Sbjct: 38 VGRTKQYANALEKSLGKGKQEVSLNAFAFLFSELVQYNQTRVDNIAELERRLEDAGYGVG 97
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 LR+LELLCHREKGNRRE RLLGILSFVHST+WKSLFGKVADSLEKGTE+EDEYMISE+EL Sbjct: 98 LRVLELLCHREKGNRRETRLLGILSFVHSTVWKSLFGKVADSLEKGTEHEDEYMISEREL 157
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRFISVPKDMG FNCGA+VAGIVKGVLDG+GFPA V+AH Sbjct: 158 LVNRFISVPKDMGNFNCGAFVAGIVKGVLDGAGFPAVVSAH 198
>tr|B4FGI9|B4FGI9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 194
Score = 279 bits (714), Expect = 5e-74 Identities = 135/161 (83%), Positives = 150/161 (93%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +G++KQY NV+DKPL +G+ EVSL+AFAFLFSE+VQYNQT+VDNI ELE RLEDAGY VG Sbjct: 4 VGKAKQYANVLDKPLSRGRQEVSLSAFAFLFSELVQYNQTQVDNITELERRLEDAGYAVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 R+LELLCHREKGNRRE RLLGILSF+HST+WK LFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 ARVLELLCHREKGNRRETRLLGILSFIHSTVWKVLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRFISVPKDMGAFNCGA+VAGIVKGVLD +GFPA VTAH Sbjct: 124 LVNRFISVPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAH 164
>tr|A9TS83|A9TS83_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_224875 PE=4 SV=1 Length = 194
Score = 279 bits (714), Expect = 5e-74 Identities = 134/161 (83%), Positives = 152/161 (94%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +GR+KQ +NVVD+PLGKGK EVSL+AFAFLFSE+VQYNQ +V+NIAELEHRLE+AG+GVG Sbjct: 4 VGRAKQNLNVVDRPLGKGKSEVSLSAFAFLFSELVQYNQGKVENIAELEHRLEEAGFGVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 +RMLELLCHR+K NRRE R+LGILSFVHST+WKSLFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 IRMLELLCHRDKANRRETRVLGILSFVHSTVWKSLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRF+SVP MG FNCG +VAGIVKGVLDG+GFPARVTAH Sbjct: 124 LVNRFVSVPGGMGGFNCGTFVAGIVKGVLDGAGFPARVTAH 164
>tr|Q5N9C8|Q5N9C8_ORYSJ cDNA clone:002-182-B01, full insert sequence OS=Oryza sativa subsp. japonica GN=P0510F09.29 PE=2 SV=1 Length = 194
Score = 278 bits (711), Expect = 1e-73 Identities = 134/161 (83%), Positives = 151/161 (93%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +G++KQY NV+DKPL +G+ EVSL+AFAFLFSE+VQYNQT+VDNIAELE RLEDAGY VG Sbjct: 4 VGKAKQYANVLDKPLSRGRQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 R+LELLCHREKGNRRE RLLGILSF+HST+WK LFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 ARVLELLCHREKGNRRETRLLGILSFIHSTVWKVLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRFISVPKDMGAFNCGA+VAGIV+GVL+ +GFPA VTAH Sbjct: 124 LVNRFISVPKDMGAFNCGAFVAGIVRGVLENAGFPAVVTAH 164
>tr|B8A8C6|B8A8C6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03459 PE=4 SV=1 Length = 194
Score = 278 bits (711), Expect = 1e-73 Identities = 134/161 (83%), Positives = 151/161 (93%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +G++KQY NV+DKPL +G+ EVSL+AFAFLFSE+VQYNQT+VDNIAELE RLEDAGY VG Sbjct: 4 VGKAKQYANVLDKPLSRGRQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 R+LELLCHREKGNRRE RLLGILSF+HST+WK LFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 ARVLELLCHREKGNRRETRLLGILSFIHSTVWKVLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRFISVPKDMGAFNCGA+VAGIV+GVL+ +GFPA VTAH Sbjct: 124 LVNRFISVPKDMGAFNCGAFVAGIVRGVLENAGFPAVVTAH 164
>tr|A9PJ15|A9PJ15_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 194
Score = 277 bits (709), Expect = 2e-73 Identities = 135/161 (83%), Positives = 149/161 (92%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +G+ KQY NV+DKPL KGK EVS +AFAFLFSE+VQYNQT+VDNIAELE RLEDAGY VG Sbjct: 4 VGKIKQYSNVLDKPLSKGKQEVSSSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 R+LELLCHR+KGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 ARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRFIS+PKDMG FNCGA+VAGIV+GVLDG+GFPA VTAH Sbjct: 124 LVNRFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAH 164
>tr|B7FMS6|B7FMS6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 194
Score = 277 bits (708), Expect = 3e-73 Identities = 134/161 (83%), Positives = 149/161 (92%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +G+ KQY NV+DKPL KGK EVSL+AFAFLFSE+VQYNQT+VDNI ELE RLEDAGY VG Sbjct: 4 VGKVKQYGNVLDKPLNKGKTEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGYAVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 R+LELLCHR+KGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 ARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVN+FIS+PKDMG FNCGA+VAGIV+GVLDG+GFPA VTAH Sbjct: 124 LVNKFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAH 164
>tr|Q9FGU1|Q9FGU1_ARATH Gb|AAD34459.1 (SPP30-like protein) (At5g58030) OS=Arabidopsis thaliana GN=At5g58030 PE=2 SV=1 Length = 195
Score = 276 bits (707), Expect = 4e-73 Identities = 136/161 (84%), Positives = 148/161 (91%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +G+ KQY NV+DKPL KGK EVSL AFAFLFSE+VQYNQT+VDNIAELE RLEDAGY VG Sbjct: 4 VGKMKQYSNVLDKPLSKGKQEVSLTAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 R+LELLC+REKGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 SRVLELLCNREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRFIS+PKDMG FNCGA+VAGIVKGVLD +GFPA VTAH Sbjct: 124 LVNRFISIPKDMGTFNCGAFVAGIVKGVLDNAGFPAVVTAH 164
>tr|A9PAN6|A9PAN6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 194
Score = 276 bits (705), Expect = 6e-73 Identities = 134/161 (83%), Positives = 149/161 (92%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +G+ KQY NV++KPL KGK EVSL+AFAFLFSE+VQYNQT+VDNIAELE RLEDAGY VG Sbjct: 4 VGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 R+LELLCHR+KGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 ARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRFIS+PKDMG FNCGA+VAGIV+GVLD +GFPA VTAH Sbjct: 124 LVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAH 164
>tr|A7PFS6|A7PFS6_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017228001 PE=4 SV=1 Length = 194
Score = 275 bits (704), Expect = 8e-73 Identities = 134/161 (83%), Positives = 148/161 (91%) Frame = +2
Query: 44 IGRSKQYVNVVDKPLGKGKLEVSLNAFAFLFSEMVQYNQTRVDNIAELEHRLEDAGYGVG 223 +G+ KQY NV+DKPL KGK EVSL+AFAFLFSE+VQYNQ +VDNIAELE RLEDAGY VG Sbjct: 4 VGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQAQVDNIAELERRLEDAGYAVG 63
Query: 224 LRMLELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKEL 403 R+LELLCHR+KGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKEL Sbjct: 64 ARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKEL 123
Query: 404 LVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAH 526 LVNRFIS+PKDMG FNCGA+VAGIV+GVLD +GFPA VTAH Sbjct: 124 LVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAH 164
|