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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951889
Clone id TST38A01NGRL0012_J16
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_J16. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CCTGATGTAGAGTGGAGGAGAAGTATCGCCCGCGCAGGGCTGCACACATTTACGAGCGCG
CAAGAAACGTCCGCAAGCAGGTAGGTAGACAAACAGATACAGACACAGACATATTCGCAC
ATGGAGACTGGACTCTTGGAGAACTGGCTTCACAGAGCCGCTTTTTCATTCTCCAATTCT
CCATCAGGTGTTTTAAGGTCTTCTTCACCTTCTGCGCAACAGATTGCCCAGGCTTGGTCC
CGAGTTCGTGAGTGCGTGCAGGGTGGGCTTTTCCTGCCACAGCACTCTGCTGCCCTCGAT
CTTCTGAAAGAGTACGGAAACACAATCCATGTGGCCGAGTCTCAGGCTAGGGTCTTAACG
TCAATCTTATCTTCTATCACGTTCCGTCCTGATGTTGAGGAGAATGCTGCAGCACATGCG
CGAAGCTCTGCTGCATCGCTTTTGAGCATATGGCTTCGAAGGGGGTTTGCACCTTCTGGA
AGGCATGGCTCAAAGGCATCATCATCCAGAATCAAGGAAACAATTGAATCTGTGGTAGGA
AGTGCAATCAAGGCATTAGAGAGCTCTACATTGGACAATGGGCT
■■Homology search results ■■ -
sp_hit_id P03517
Definition sp|P03517|VGLM_PTPV Envelope glycoprotein OS=Punta toro phlebovirus
Align length 39
Score (bit) 31.2
E-value 3.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951889|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_J16, 5'
         (584 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P03517|VGLM_PTPV Envelope glycoprotein OS=Punta toro phlebovi...    31   3.9  
sp|P15974|PHXR4_MOUSE Putative per-hexamer repeat protein 4 OS=M...    31   5.2  
sp|Q6CXW3|ATG7_KLULA Autophagy-related protein 7 OS=Kluyveromyce...    30   6.7  
sp|Q96AN5|TM143_HUMAN Transmembrane protein 143 OS=Homo sapiens ...    30   8.8  

>sp|P03517|VGLM_PTPV Envelope glycoprotein OS=Punta toro phlebovirus
            GN=M PE=3 SV=1
          Length = 1313

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 463  GFAPSGRHGSKASSSRIKETIESVVGSAIKALESSTLDN 579
            G  P  R+G   +S++ K+T+++    AIKAL S  LD+
Sbjct: 1098 GSLPQTRNGQTFTSTKDKKTVQAFTNGAIKALLSINLDD 1136


>sp|P15974|PHXR4_MOUSE Putative per-hexamer repeat protein 4 OS=Mus
           musculus GN=Phxr4 PE=2 SV=1
          Length = 95

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -1

Query: 122 MCEYVC---VCICLSTYLLADVSCALVNVCSPA 33
           +C YVC   +C+C S  +   V C  V+VC+ A
Sbjct: 2   LCIYVCGVCLCVCFSVCMCVHVLCVYVHVCTYA 34


>sp|Q6CXW3|ATG7_KLULA Autophagy-related protein 7 OS=Kluyveromyces
           lactis GN=ATG7 PE=3 SV=1
          Length = 603

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -1

Query: 566 ELSNALIALPTTDSIVSLILDDDAFEPCLPEGANPLRSHMLKSDAAE-LRAC-AAAFSST 393
           EL +AL     T + VSL L DD+F+P L   A  L+  +L  +  E  ++C    F   
Sbjct: 39  ELFSALDLENITSNTVSLSLRDDSFDPVLNNEAVTLKGSVLNFNTIESFKSCDKVKFIKE 98

Query: 392 SGRNVIE 372
            G+ ++E
Sbjct: 99  KGQQLLE 105


>sp|Q96AN5|TM143_HUMAN Transmembrane protein 143 OS=Homo sapiens
           GN=TMEM143 PE=2 SV=1
          Length = 459

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
 Frame = -2

Query: 331 HGLCFRTLSEDRGQQSAVAGKAHPARTHE-------LGTKPG--QSVAQKVKKTLKHLME 179
           H L +R+ S +    SA+A +A    T E       L  +PG  Q   ++  + L+  +E
Sbjct: 340 HMLYYRSTSNNSELLSALALRAQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVE 399

Query: 178 NWRMKKRLCEAS 143
           NW + K  CE +
Sbjct: 400 NWLLAKSGCEVT 411
tr_hit_id A9S1B7
Definition tr|A9S1B7|A9S1B7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 46
Score (bit) 39.3
E-value 0.16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951889|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_J16, 5'
         (584 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S1B7|A9S1B7_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.16 
tr|Q4RLJ7|Q4RLJ7_TETNG Chromosome 10 SCAF15019, whole genome sho...    37   0.62 
tr|B7BF94|B7BF94_9PORP Putative uncharacterized protein OS=Parab...    37   0.62 
tr|Q8NH31|Q8NH31_HUMAN Seven transmembrane helix receptor OS=Hom...    35   4.0  
tr|A7QKA5|A7QKA5_VITVI Chromosome chr2 scaffold_112, whole genom...    34   5.2  
tr|B8ALD8|B8ALD8_ORYSI Putative uncharacterized protein OS=Oryza...    34   6.9  
tr|Q4T0K3|Q4T0K3_TETNG Chromosome 11 SCAF10960, whole genome sho...    33   9.0  
tr|A0L621|A0L621_MAGSM Sensor protein OS=Magnetococcus sp. (stra...    33   9.0  

>tr|A9S1B7|A9S1B7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_162295 PE=4 SV=1
          Length = 922

 Score = 39.3 bits (90), Expect = 0.16
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = +1

Query: 241 RVRECVQGGLFLPQHSAALDLLKEYGNTIHVAESQARVLTSILSSI 378
           ++R CVQ GL    H+ AL L+  +  ++HVA+ Q ++L  +L+ +
Sbjct: 44  KIRACVQQGLLDSSHAEALSLIDLHHKSVHVADPQVKLLLGLLTKV 89


>tr|Q4RLJ7|Q4RLJ7_TETNG Chromosome 10 SCAF15019, whole genome shotgun
            sequence. (Fragment) OS=Tetraodon nigroviridis
            GN=GSTENG00032458001 PE=4 SV=1
          Length = 1434

 Score = 37.4 bits (85), Expect = 0.62
 Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 22/125 (17%)
 Frame = -1

Query: 335  ATWIVFPYSFRRSRAAEC-CGRKSPPCTHSRTRDQAWAICC----------------AEG 207
            ATW + P S R S A+    GR SP    S  RD +W +                  AE 
Sbjct: 1155 ATWQLEPPSPRESAASSAESGRASP----SLRRDGSWFMQLLHTDTKRIEGWCKEMEAEA 1210

Query: 206  EEDLKTPDGELENE-----KAAL*SQFSKSPVSMCEYVCVCICLSTYLLADVSCALVNVC 42
            EE+    + E E E        L    + S +S+C  VCVC+C+   LL   S    + C
Sbjct: 1211 EENDLPEESEWEREGYTCQPGRLNEGVAFSTLSVCVCVCVCVCVCVSLLVCFSSRQNSEC 1270

Query: 41   SPARA 27
            S  R+
Sbjct: 1271 SGKRS 1275


>tr|B7BF94|B7BF94_9PORP Putative uncharacterized protein
           OS=Parabacteroides johnsonii DSM 18315
           GN=PRABACTJOHN_03723 PE=4 SV=1
          Length = 504

 Score = 37.4 bits (85), Expect = 0.62
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
 Frame = +3

Query: 36  RAAHIYERARNV----RKQVGRQTDT-----DTDIFAHGDWTLGELASQSR-FFILQFSI 185
           R   + +R R V    R+  GRQT T     DT++ AH +WT+  + +  R  F +++S 
Sbjct: 65  RLFEVVQRIREVNAQRRRAAGRQTATGRSVSDTELKAHPEWTVDYIVAPPRMMFYIEYST 124

Query: 186 RCFKVFFTFCATD 224
           R ++++  + A +
Sbjct: 125 RIYQIYLKYVAPE 137


>tr|Q8NH31|Q8NH31_HUMAN Seven transmembrane helix receptor OS=Homo
           sapiens PE=4 SV=1
          Length = 346

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -1

Query: 128 VSMCEYVCVCICLSTYLLADVSCALVNVCSPARAILLL 15
           V +C YVC+C+C+S  L   V CA +++C   R  + L
Sbjct: 115 VYLCVYVCICVCVSVSLCVSV-CACLSLCVCIRVSVCL 151


>tr|A7QKA5|A7QKA5_VITVI Chromosome chr2 scaffold_112, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00001041001
           PE=4 SV=1
          Length = 786

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 24/84 (28%), Positives = 37/84 (44%)
 Frame = +1

Query: 124 ETGLLENWLHRAAFSFXXXXXXXXXXXXXXXXXXXXXXXRVRECVQGGLFLPQHSAALDL 303
           +T  LE WL   + S                         +R+ +Q   F P H  +L  
Sbjct: 6   QTPFLEEWLRSHSGSGSSISISSGRPSSVSARAIIQAWTELRDSLQYQSFHPNHFQSLRT 65

Query: 304 LKEYGNTIHVAESQARVLTSILSS 375
           L +  ++++VA+ QAR+L SILSS
Sbjct: 66  LFDSQSSLYVADPQARLLLSILSS 89


>tr|B8ALD8|B8ALD8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09657 PE=4 SV=1
          Length = 687

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 2/99 (2%)
 Frame = -1

Query: 308 FRRSRAAECCGRKSPPCTHSRTRDQAWAICCAEGEEDLKTPDGELENEKAAL*SQFSKSP 129
           F +     C  ++S  C H      AW + C +G   + +   ++      L  Q    P
Sbjct: 133 FEKINTTTCWAKRSVDCVHGFLIYYAWTVSCGQGTAVVISTGRDIPRSTLRLYPQRYTRP 192

Query: 128 VSMCEYVCV--CICLSTYLLADVSCALVNVCSPARAILL 18
             + E + +  C C S  L      AL+ V   A  ++L
Sbjct: 193 GQLKEGIMIVGCFCFSLVLFGWRFMALIGVVPMAMPVVL 231


>tr|Q4T0K3|Q4T0K3_TETNG Chromosome 11 SCAF10960, whole genome
           shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
           GN=GSTENG00009286001 PE=4 SV=1
          Length = 688

 Score = 33.5 bits (75), Expect = 9.0
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 140 SKSPVSMCEYVCVCICLSTYLLADVSCALVNVCSPA 33
           S  PV +C  VCVC+C+   +     C  V VC+PA
Sbjct: 241 SNQPVCVCVCVCVCVCVCVCVCV---CVRVCVCAPA 273


>tr|A0L621|A0L621_MAGSM Sensor protein OS=Magnetococcus sp. (strain
           MC-1) GN=Mmc1_0895 PE=3 SV=1
          Length = 894

 Score = 33.5 bits (75), Expect = 9.0
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 113 IRTWR-LDSWRTGFTEPLFHSPILHQVF 193
           + TW  LD W+TG  + LFH  +LHQV+
Sbjct: 30  VATWGVLDHWQTGHLKALFHDELLHQVW 57