DK951776 |
Clone id |
TST38A01NGRL0012_E21 |
Library |
TST38 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_E21. 5' end sequence. |
Accession |
DK951776 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1071Contig1 |
Sequence |
AAGCTTTCTACAGATAAAGTTGAGCAGCCACGAGAGTGAAGGGAGTGAGGAGGGAGCTGC AATGGCGGCCTCCACAGCGTTCACGCGTGTGCCTGCTTGTTCGTCGTCCGTCTGTGAGGC TCGTCATGGCCAACATGCGTCGCGTAAATTGGCGCACCGCCTGTGCTTCGGAAGCCGACG GTTGGATCTGACGCTGCGGCCACAGGGACCCAGCGCCTTCAGAAGTCCCCTTCTCTCCAT AGCTGCGTCGTCAGAGTTTGCTAATAAGATATCTCCTCAGTTTCGTGAGTTTCTTGCTGA GGAACTTGGGAAATACGACTATCTTTCAGATGCCCGTGGACGAATAGCAGAGGTTTGCGC AAAGGCGCTGCATAATTATGCGTCAACATATTCTGGTGGGATTGACGCGAAGCCTGTCGA AGACATGAAAACAGCTCTCATAGAGCAAGGTCTTCCCCATCAGCAAGCCTTGCTTTGCTC AGTTTGGTGGCTGCGAGTGAATCTTAGGAGGGATTGGGAACAATATTGCGCAGCCAAATG ATTAAATGTAGTGTAGTTTGGGTCTTTTGGAGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3ZAV1 |
Definition |
sp|Q3ZAV1|S22AC_RAT Solute carrier family 22 member 12 OS=Rattus norvegicus |
Align length |
41 |
Score (bit) |
32.3 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P093 |
Definition |
tr|A9P093|A9P093_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
100 |
Score (bit) |
57.8 |
E-value |
4.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951776|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_E21, 5' (574 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P093|A9P093_PICSI Putative uncharacterized protein OS=Picea... 58 4e-07 tr|A7Q2H9|A7Q2H9_VITVI Chromosome chr1 scaffold_46, whole genome... 47 0.001 tr|Q9XIK0|Q9XIK0_ARATH T10O24.14 (At1g10522) (Putative uncharact... 43 0.014 tr|A5B0T3|A5B0T3_VITVI Putative uncharacterized protein OS=Vitis... 42 0.031 tr|A7Z304|A7Z304_BACA2 YhaN OS=Bacillus amyloliquefaciens (strai... 40 0.091 tr|Q099X8|Q099X8_STIAU Putative uncharacterized protein OS=Stigm... 38 0.35 tr|Q29JM1|Q29JM1_DROPS GA17510 OS=Drosophila pseudoobscura pseud... 35 2.9 tr|B4N380|B4N380_DROWI GK12650 OS=Drosophila willistoni GN=GK126... 35 2.9 tr|B4H385|B4H385_DROPE GL13400 OS=Drosophila persimilis GN=GL134... 35 2.9 tr|Q5GUB2|Q5GUB2_XANOR Putative uncharacterized protein OS=Xanth... 33 8.6 tr|Q2NXM6|Q2NXM6_XANOM Putative uncharacterized protein XOO4196 ... 33 8.6 tr|A5V2X0|A5V2X0_SPHWW Glutamate synthase (NADH) large subunit O... 33 8.6
>tr|A9P093|A9P093_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 177
Score = 57.8 bits (138), Expect = 4e-07 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Frame = +2
Query: 239 IAASSEFANKISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGGIDAKPV 418 I A S+FA+ + +FR+ L + L + D R R+ + C K +A +YSG + +P Sbjct: 74 IVAQSDFADHEATRFRDGLLKMLADDQNIGDLRVRMVDTCTKIFREFAMSYSGELPMEPF 133
Query: 419 EDMKTALIE-QGLP---HQQALLCSVWWLRVNLRRDWEQY 526 +M+ L E QG+P + ++ W R NL RDW+++ Sbjct: 134 VEMRRVLEEGQGIPLSIVSKVTRGAIGWSRYNLYRDWKKW 173
>tr|A7Q2H9|A7Q2H9_VITVI Chromosome chr1 scaffold_46, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028892001 PE=4 SV=1 Length = 192
Score = 46.6 bits (109), Expect = 0.001 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%) Frame = +2
Query: 254 EFANKISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGG---IDAKPVED 424 EFA + +FR L + K D ++ + +C + + T GG + P D Sbjct: 93 EFAQVETEKFRTHLLNKFSKKDIYGESVEEVVGICTEIFSTFLHTEYGGPGTLLVIPFID 152
Query: 425 MKTALIEQGLPHQQALLCSVWWLRVNLRRDWEQY 526 M L E+GLP QA +V W + ++ +DW ++ Sbjct: 153 MADTLNERGLPGSQAARAAVKWAQDHVDKDWNEW 186
>tr|Q9XIK0|Q9XIK0_ARATH T10O24.14 (At1g10522) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g10522 PE=2 SV=1 Length = 179
Score = 42.7 bits (99), Expect = 0.014 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = +2
Query: 254 EFANKISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGG---IDAKPVED 424 EFA + +FR+ + +L K D D+ I VC + + + GG + P D Sbjct: 81 EFAEAETEKFRDHMLNKLSKRDLFEDSVDEIVGVCTEIFETFLRSEYGGPGTLLVIPFID 140
Query: 425 MKTALIEQGLP-HQQALLCSVWWLRVNLRRDWEQY 526 M L E+ LP QA ++ W + ++ +DW+++ Sbjct: 141 MADTLNERELPGGPQAARAAIKWAQDHVDKDWKEW 175
>tr|A5B0T3|A5B0T3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018708 PE=4 SV=1 Length = 170
Score = 41.6 bits (96), Expect = 0.031 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +2
Query: 278 QFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGG---IDAKPVEDMKTALIEQ 448 +FR L + K D + + +C + + T GG + P DM L E+ Sbjct: 79 KFRTHLLNKFSKKDIYGXSVEEVVGICTEIFSTFLHTEYGGPGTLLVIPFIDMADTLNER 138
Query: 449 GLPHQQALLCSVWWLRVNLRRDWEQY 526 GLP QA +V W + ++ +DW ++ Sbjct: 139 GLPGSQAARAAVKWAQDHVDKDWNEW 164
>tr|A7Z304|A7Z304_BACA2 YhaN OS=Bacillus amyloliquefaciens (strain FZB42) GN=yhaN PE=4 SV=1 Length = 960
Score = 40.0 bits (92), Expect = 0.091 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 5/120 (4%) Frame = +2
Query: 128 GQHASRKLAHRLCFGSRRLDLTLRPQGPSAFRSPLLSIAASSEFANKISPQFREFLAEEL 307 G A+ KL RL ++ LD +P G R+P L+ + ++S Q ++ A E Sbjct: 151 GSEAAAKLDGRL---AKELDRMYKPNG----RNPRLN--QELDTLKRLSAQLKQAEAAEA 201
Query: 308 GKYDYLSD---ARGRI--AEVCAKALHNYASTYSGGIDAKPVEDMKTALIEQGLPHQQAL 472 G + L + A GR+ AE K + T I+AKP+ D KTAL + + +AL Sbjct: 202 GYHSLLEEKKSAGGRLQDAEARLKDITEEIKTVKSAIEAKPLADKKTALESELSSYPEAL 261
>tr|Q099X8|Q099X8_STIAU Putative uncharacterized protein OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_7359 PE=4 SV=1 Length = 594
Score = 38.1 bits (87), Expect = 0.35 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = -2
Query: 261 ANSDDAAMERRGLLKALGPCGRSVRSNRRLPKHRRCANL 145 A D A+ RRG L++L P VR RLP+HR CA + Sbjct: 15 AGRADGALPRRGRLRSLEPLHHPVRRPHRLPRHRLCAGV 53
>tr|Q29JM1|Q29JM1_DROPS GA17510 OS=Drosophila pseudoobscura pseudoobscura GN=GA17510 PE=3 SV=1 Length = 509
Score = 35.0 bits (79), Expect = 2.9 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +2
Query: 137 ASRKLAHRLCFGSRRLDLTLRPQGPSAFRSPLLSIAASSEFANKISPQFREFLAEELGKY 316 AS LA R ++RLD+++R PSAF +I A +F N + + R+ L + + Sbjct: 208 ASGMLAERFVNPAQRLDISMRLFFPSAFAKLSANIKAMQDFTNNVISERRDLLQKSISDG 267
Query: 317 DY 322 Y Sbjct: 268 TY 269
>tr|B4N380|B4N380_DROWI GK12650 OS=Drosophila willistoni GN=GK12650 PE=4 SV=1 Length = 1130
Score = 35.0 bits (79), Expect = 2.9 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Frame = +2
Query: 200 PQGPSAFRSPLLSIAASSEFANKISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNY 379 P+G A R+PL S+AA S+ +++ + Q EL + S GR + + A+A+ Sbjct: 246 PKGRRAARNPLKSLAARSDISSEYTEQKSGIAERELRRLKLESFGHGR-SNLAAEAIAGL 304
Query: 380 ASTYSGGIDAKPVEDMKT-ALIEQGLPHQQALL 475 AS VED K+ AL LP QQ L Sbjct: 305 AS----------VEDFKSVALRSSSLPLQQMWL 327
>tr|B4H385|B4H385_DROPE GL13400 OS=Drosophila persimilis GN=GL13400 PE=4 SV=1 Length = 509
Score = 35.0 bits (79), Expect = 2.9 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +2
Query: 137 ASRKLAHRLCFGSRRLDLTLRPQGPSAFRSPLLSIAASSEFANKISPQFREFLAEELGKY 316 AS LA R ++RLD+++R PSAF +I A +F N + + R+ L + + Sbjct: 208 ASGMLAERFVNPAQRLDISMRLFFPSAFAKLSANIKAMQDFTNNVISERRDLLQKSISDG 267
Query: 317 DY 322 Y Sbjct: 268 TY 269
>tr|Q5GUB2|Q5GUB2_XANOR Putative uncharacterized protein OS=Xanthomonas oryzae pv. oryzae GN=XOO4457 PE=4 SV=1 Length = 287
Score = 33.5 bits (75), Expect = 8.6 Identities = 22/68 (32%), Positives = 31/68 (45%) Frame = +2
Query: 137 ASRKLAHRLCFGSRRLDLTLRPQGPSAFRSPLLSIAASSEFANKISPQFREFLAEELGKY 316 AS L H C S+ + + F +PLL +AA + A SPQF + Y Sbjct: 3 ASTNLRHAACPDSKATSMR-----GTVFLAPLLLLAAFAAHAEAASPQFSSRQCDVSTSY 57
Query: 317 DYLSDARG 340 D L+D+ G Sbjct: 58 DVLADSGG 65
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