DK951776
Clone id TST38A01NGRL0012_E21
Library
Length 574
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_E21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
AAGCTTTCTACAGATAAAGTTGAGCAGCCACGAGAGTGAAGGGAGTGAGGAGGGAGCTGC
AATGGCGGCCTCCACAGCGTTCACGCGTGTGCCTGCTTGTTCGTCGTCCGTCTGTGAGGC
TCGTCATGGCCAACATGCGTCGCGTAAATTGGCGCACCGCCTGTGCTTCGGAAGCCGACG
GTTGGATCTGACGCTGCGGCCACAGGGACCCAGCGCCTTCAGAAGTCCCCTTCTCTCCAT
AGCTGCGTCGTCAGAGTTTGCTAATAAGATATCTCCTCAGTTTCGTGAGTTTCTTGCTGA
GGAACTTGGGAAATACGACTATCTTTCAGATGCCCGTGGACGAATAGCAGAGGTTTGCGC
AAAGGCGCTGCATAATTATGCGTCAACATATTCTGGTGGGATTGACGCGAAGCCTGTCGA
AGACATGAAAACAGCTCTCATAGAGCAAGGTCTTCCCCATCAGCAAGCCTTGCTTTGCTC
AGTTTGGTGGCTGCGAGTGAATCTTAGGAGGGATTGGGAACAATATTGCGCAGCCAAATG
ATTAAATGTAGTGTAGTTTGGGTCTTTTGGAGTC
■■Homology search results ■■ -
sp_hit_id Q3ZAV1
Definition sp|Q3ZAV1|S22AC_RAT Solute carrier family 22 member 12 OS=Rattus norvegicus
Align length 41
Score (bit) 32.3
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951776|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_E21, 5'
(574 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3ZAV1|S22AC_RAT Solute carrier family 22 member 12 OS=Rattus... 32 1.7
sp|P55504|Y4JD_RHISN Uncharacterized protein y4jD OS=Rhizobium s... 31 3.9
sp|Q8CFZ5|S22AC_MOUSE Solute carrier family 22 member 12 OS=Mus ... 31 5.0
sp|P03010|TRAC9_MAIZE Putative AC9 transposase OS=Zea mays PE=4 ... 31 5.1
sp|O88881|BEGIN_RAT Brain-enriched guanylate kinase-associated p... 31 5.1
sp|P48755|FOSL1_MOUSE Fos-related antigen 1 OS=Mus musculus GN=F... 30 6.6
sp|Q02388|CO7A1_HUMAN Collagen alpha-1(VII) chain OS=Homo sapien... 30 6.6
sp|P10158|FOSL1_RAT Fos-related antigen 1 OS=Rattus norvegicus G... 30 8.6
sp|O86786|ALR_STRCO Alanine racemase OS=Streptomyces coelicolor ... 30 8.6

>sp|Q3ZAV1|S22AC_RAT Solute carrier family 22 member 12 OS=Rattus
norvegicus GN=Slc22a12 PE=2 SV=1
Length = 553

Score = 32.3 bits (72), Expect = 1.7
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3

Query: 69 PPQRSRVCLLVRRPSVRLVMANMRRVNWRTACASEA-DGWI 188
P QR CL R+P +L+ +N NW A DGW+
Sbjct: 81 PDQRPHQCLRFRQPQWQLIESNTTATNWSDADTEPCEDGWV 121


>sp|P55504|Y4JD_RHISN Uncharacterized protein y4jD OS=Rhizobium sp.
(strain NGR234) GN=y4jD PE=3 SV=1
Length = 511

Score = 31.2 bits (69), Expect = 3.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2

Query: 290 FLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGGIDAKP 415
FL + L +YD + + R C+ ALH T S +D P
Sbjct: 87 FLPKHLPRYDVIIEPESRACACCSGALHRIGETTSEALDIVP 128


>sp|Q8CFZ5|S22AC_MOUSE Solute carrier family 22 member 12 OS=Mus
musculus GN=Slc22a12 PE=1 SV=1
Length = 553

Score = 30.8 bits (68), Expect = 5.0
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3

Query: 69 PPQRSRVCLLVRRPSVRLVMANMRRVNWRTACASEA-DGWI 188
P Q+ CL R+P +L +N NW A DGW+
Sbjct: 81 PDQQPHQCLRFRQPQWQLTESNATATNWSDAATEPCEDGWV 121


>sp|P03010|TRAC9_MAIZE Putative AC9 transposase OS=Zea mays PE=4
SV=1
Length = 839

Score = 30.8 bits (68), Expect = 5.1
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Frame = +2

Query: 260 ANKISPQFREFLAEELGKYDYLSDARGRIAE----------VCAKALHNYASTYSGGIDA 409
+N++ E L + G++D LS RGR+AE V A + AS +
Sbjct: 636 SNELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAGG 695

Query: 410 KPVEDMKTALIEQGLPHQQALLCSVWWLRVNLRRDW 517
+ V+ + L G +AL+C+ W+ + + +W
Sbjct: 696 RVVDPYRNRL---GSEIVEALICTKDWVAASRKGEW 728


>sp|O88881|BEGIN_RAT Brain-enriched guanylate kinase-associated
protein OS=Rattus norvegicus GN=Begain PE=1 SV=1
Length = 611

Score = 30.8 bits (68), Expect = 5.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +2

Query: 269 ISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGGIDAKPVEDMKTAL 439
I Q+R E++G Y Y + A GR A C + Y GG K E + L
Sbjct: 430 IRGQWRPLSVEDVGAYSYQAGAAGRAASPCNFSERFYGGGGGGGSPGKNAEGRASPL 486


>sp|P48755|FOSL1_MOUSE Fos-related antigen 1 OS=Mus musculus
GN=Fosl1 PE=2 SV=2
Length = 273

Score = 30.4 bits (67), Expect = 6.6
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1

Query: 247 RSYGEKGTSEGAGSLWPQRQIQPSASEAQAVRQ 149
R YGE G S GAGS + R QP ++AQ +Q
Sbjct: 3 RDYGEPGPSSGAGSPY-GRPAQPPQAQAQTAQQ 34


>sp|Q02388|CO7A1_HUMAN Collagen alpha-1(VII) chain OS=Homo sapiens
GN=COL7A1 PE=1 SV=2
Length = 2944

Score = 30.4 bits (67), Expect = 6.6
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2

Query: 83 TRVPACSSSVCEARHGQHASRKLAHRLCFGSR---RLDLTLRPQGPSAFRSPLLSIAASS 253
T+ P C + + HA++ AHR R RL L L P GP A + LLS
Sbjct: 1043 TQTPVCPRGLADVVFLPHATQDNAHRAEATRRVLERLVLALGPLGPQAVQVGLLS----- 1097

Query: 254 EFANKISPQFREFLAEELG 310
++++ SP F + +LG
Sbjct: 1098 -YSHRPSPLFPLNGSHDLG 1115


>sp|P10158|FOSL1_RAT Fos-related antigen 1 OS=Rattus norvegicus
GN=Fosl1 PE=2 SV=1
Length = 275

Score = 30.0 bits (66), Expect = 8.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1

Query: 247 RSYGEKGTSEGAGSLWPQRQIQPSASEAQAVRQ 149
R +GE G S GAGS + R QP ++ Q V+Q
Sbjct: 3 RDFGEPGPSSGAGSAY-GRPAQPQQAQTQTVQQ 34


>sp|O86786|ALR_STRCO Alanine racemase OS=Streptomyces coelicolor
GN=alr PE=3 SV=1
Length = 391

Score = 30.0 bits (66), Expect = 8.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2

Query: 326 SDARGRIAEVCAKALHNYASTYSGGIDAKPVEDMKTALIEQGLPHQQALLCSVW 487
+DA G A CA+A +T+ G A P E + E GLP ++C +W
Sbjct: 47 ADAYGHGAIPCARAAVAAGATWLG--TATPQEALALRAAEPGLPDDVRIMCWLW 98


tr_hit_id A9P093
Definition tr|A9P093|A9P093_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 100
Score (bit) 57.8
E-value 4.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951776|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_E21, 5'
(574 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9P093|A9P093_PICSI Putative uncharacterized protein OS=Picea... 58 4e-07
tr|A7Q2H9|A7Q2H9_VITVI Chromosome chr1 scaffold_46, whole genome... 47 0.001
tr|Q9XIK0|Q9XIK0_ARATH T10O24.14 (At1g10522) (Putative uncharact... 43 0.014
tr|A5B0T3|A5B0T3_VITVI Putative uncharacterized protein OS=Vitis... 42 0.031
tr|A7Z304|A7Z304_BACA2 YhaN OS=Bacillus amyloliquefaciens (strai... 40 0.091
tr|Q099X8|Q099X8_STIAU Putative uncharacterized protein OS=Stigm... 38 0.35
tr|Q29JM1|Q29JM1_DROPS GA17510 OS=Drosophila pseudoobscura pseud... 35 2.9
tr|B4N380|B4N380_DROWI GK12650 OS=Drosophila willistoni GN=GK126... 35 2.9
tr|B4H385|B4H385_DROPE GL13400 OS=Drosophila persimilis GN=GL134... 35 2.9
tr|Q5GUB2|Q5GUB2_XANOR Putative uncharacterized protein OS=Xanth... 33 8.6
tr|Q2NXM6|Q2NXM6_XANOM Putative uncharacterized protein XOO4196 ... 33 8.6
tr|A5V2X0|A5V2X0_SPHWW Glutamate synthase (NADH) large subunit O... 33 8.6

>tr|A9P093|A9P093_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 177

Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2

Query: 239 IAASSEFANKISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGGIDAKPV 418
I A S+FA+ + +FR+ L + L + D R R+ + C K +A +YSG + +P
Sbjct: 74 IVAQSDFADHEATRFRDGLLKMLADDQNIGDLRVRMVDTCTKIFREFAMSYSGELPMEPF 133

Query: 419 EDMKTALIE-QGLP---HQQALLCSVWWLRVNLRRDWEQY 526
+M+ L E QG+P + ++ W R NL RDW+++
Sbjct: 134 VEMRRVLEEGQGIPLSIVSKVTRGAIGWSRYNLYRDWKKW 173


>tr|A7Q2H9|A7Q2H9_VITVI Chromosome chr1 scaffold_46, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028892001
PE=4 SV=1
Length = 192

Score = 46.6 bits (109), Expect = 0.001
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +2

Query: 254 EFANKISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGG---IDAKPVED 424
EFA + +FR L + K D ++ + +C + + T GG + P D
Sbjct: 93 EFAQVETEKFRTHLLNKFSKKDIYGESVEEVVGICTEIFSTFLHTEYGGPGTLLVIPFID 152

Query: 425 MKTALIEQGLPHQQALLCSVWWLRVNLRRDWEQY 526
M L E+GLP QA +V W + ++ +DW ++
Sbjct: 153 MADTLNERGLPGSQAARAAVKWAQDHVDKDWNEW 186


>tr|Q9XIK0|Q9XIK0_ARATH T10O24.14 (At1g10522) (Putative
uncharacterized protein) OS=Arabidopsis thaliana
GN=At1g10522 PE=2 SV=1
Length = 179

Score = 42.7 bits (99), Expect = 0.014
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +2

Query: 254 EFANKISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGG---IDAKPVED 424
EFA + +FR+ + +L K D D+ I VC + + + GG + P D
Sbjct: 81 EFAEAETEKFRDHMLNKLSKRDLFEDSVDEIVGVCTEIFETFLRSEYGGPGTLLVIPFID 140

Query: 425 MKTALIEQGLP-HQQALLCSVWWLRVNLRRDWEQY 526
M L E+ LP QA ++ W + ++ +DW+++
Sbjct: 141 MADTLNERELPGGPQAARAAIKWAQDHVDKDWKEW 175


>tr|A5B0T3|A5B0T3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018708 PE=4 SV=1
Length = 170

Score = 41.6 bits (96), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2

Query: 278 QFREFLAEELGKYDYLSDARGRIAEVCAKALHNYASTYSGG---IDAKPVEDMKTALIEQ 448
+FR L + K D + + +C + + T GG + P DM L E+
Sbjct: 79 KFRTHLLNKFSKKDIYGXSVEEVVGICTEIFSTFLHTEYGGPGTLLVIPFIDMADTLNER 138

Query: 449 GLPHQQALLCSVWWLRVNLRRDWEQY 526
GLP QA +V W + ++ +DW ++
Sbjct: 139 GLPGSQAARAAVKWAQDHVDKDWNEW 164


>tr|A7Z304|A7Z304_BACA2 YhaN OS=Bacillus amyloliquefaciens (strain
FZB42) GN=yhaN PE=4 SV=1
Length = 960

Score = 40.0 bits (92), Expect = 0.091
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = +2

Query: 128 GQHASRKLAHRLCFGSRRLDLTLRPQGPSAFRSPLLSIAASSEFANKISPQFREFLAEEL 307
G A+ KL RL ++ LD +P G R+P L+ + ++S Q ++ A E
Sbjct: 151 GSEAAAKLDGRL---AKELDRMYKPNG----RNPRLN--QELDTLKRLSAQLKQAEAAEA 201

Query: 308 GKYDYLSD---ARGRI--AEVCAKALHNYASTYSGGIDAKPVEDMKTALIEQGLPHQQAL 472
G + L + A GR+ AE K + T I+AKP+ D KTAL + + +AL
Sbjct: 202 GYHSLLEEKKSAGGRLQDAEARLKDITEEIKTVKSAIEAKPLADKKTALESELSSYPEAL 261


>tr|Q099X8|Q099X8_STIAU Putative uncharacterized protein
OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_7359 PE=4
SV=1
Length = 594

Score = 38.1 bits (87), Expect = 0.35
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = -2

Query: 261 ANSDDAAMERRGLLKALGPCGRSVRSNRRLPKHRRCANL 145
A D A+ RRG L++L P VR RLP+HR CA +
Sbjct: 15 AGRADGALPRRGRLRSLEPLHHPVRRPHRLPRHRLCAGV 53


>tr|Q29JM1|Q29JM1_DROPS GA17510 OS=Drosophila pseudoobscura
pseudoobscura GN=GA17510 PE=3 SV=1
Length = 509

Score = 35.0 bits (79), Expect = 2.9
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2

Query: 137 ASRKLAHRLCFGSRRLDLTLRPQGPSAFRSPLLSIAASSEFANKISPQFREFLAEELGKY 316
AS LA R ++RLD+++R PSAF +I A +F N + + R+ L + +
Sbjct: 208 ASGMLAERFVNPAQRLDISMRLFFPSAFAKLSANIKAMQDFTNNVISERRDLLQKSISDG 267

Query: 317 DY 322
Y
Sbjct: 268 TY 269


>tr|B4N380|B4N380_DROWI GK12650 OS=Drosophila willistoni GN=GK12650
PE=4 SV=1
Length = 1130

Score = 35.0 bits (79), Expect = 2.9
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2

Query: 200 PQGPSAFRSPLLSIAASSEFANKISPQFREFLAEELGKYDYLSDARGRIAEVCAKALHNY 379
P+G A R+PL S+AA S+ +++ + Q EL + S GR + + A+A+
Sbjct: 246 PKGRRAARNPLKSLAARSDISSEYTEQKSGIAERELRRLKLESFGHGR-SNLAAEAIAGL 304

Query: 380 ASTYSGGIDAKPVEDMKT-ALIEQGLPHQQALL 475
AS VED K+ AL LP QQ L
Sbjct: 305 AS----------VEDFKSVALRSSSLPLQQMWL 327


>tr|B4H385|B4H385_DROPE GL13400 OS=Drosophila persimilis GN=GL13400
PE=4 SV=1
Length = 509

Score = 35.0 bits (79), Expect = 2.9
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2

Query: 137 ASRKLAHRLCFGSRRLDLTLRPQGPSAFRSPLLSIAASSEFANKISPQFREFLAEELGKY 316
AS LA R ++RLD+++R PSAF +I A +F N + + R+ L + +
Sbjct: 208 ASGMLAERFVNPAQRLDISMRLFFPSAFAKLSANIKAMQDFTNNVISERRDLLQKSISDG 267

Query: 317 DY 322
Y
Sbjct: 268 TY 269


>tr|Q5GUB2|Q5GUB2_XANOR Putative uncharacterized protein
OS=Xanthomonas oryzae pv. oryzae GN=XOO4457 PE=4 SV=1
Length = 287

Score = 33.5 bits (75), Expect = 8.6
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2

Query: 137 ASRKLAHRLCFGSRRLDLTLRPQGPSAFRSPLLSIAASSEFANKISPQFREFLAEELGKY 316
AS L H C S+ + + F +PLL +AA + A SPQF + Y
Sbjct: 3 ASTNLRHAACPDSKATSMR-----GTVFLAPLLLLAAFAAHAEAASPQFSSRQCDVSTSY 57

Query: 317 DYLSDARG 340
D L+D+ G
Sbjct: 58 DVLADSGG 65