DK951745 |
Clone id |
TST38A01NGRL0012_D14 |
Library |
TST38 |
Length |
611 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_D14. 5' end sequence. |
Accession |
DK951745 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GTCGCCGACCGCGTACAGGTAAGCCTCTGGATTTGAGCTCTCCTAACAGTTTGAGCAAGA AAAAAACTCCCAAAAGGAAGACTCTGTCTAGCCGCTACTCGGCTATTTTGCCTTCGAAAC GAAGGAAGCTTGGCCTGAACACGATCAGGGACCCTGTAATCTCTTTGGGAGAGACCCATC ATGCACCTGAGGCCTGTCATGCAGCGGTGAGTCCGAAGTCCACCAATGCATCTGAAGTCC CTGCCAAGGAAAAGGAAGCTAGGCATTCTGGAACAAAAGGCCGAGCACGTAAGACAAAGG CTAAAGCAAGGGCAAGAGCAAGAGCAAGAGCAAGGGGGGCTAATGCAAGAGTAAAAGCAA GCAGAGGCCTGAAATCAGAGGTTTGTCCAATAGCAAAGCTTGTGGACTCTGAGGATATCT CCAATGAGGAGGCCGATTCTGAAATAGACTTGTTTCATCCGAATGCCACCACAGAAGTAG GAAAACAGGGTTTAGAAACAATTGAAGCAGGAGCATTGGACCTAGCAAGAACAGATGATT TAGATGCCACGCATGCAGACCCAAGACAGAGTTCAGAAAAGCATGTATTGGTAGCAAACA GAGGACCAGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A5IMA0 |
Definition |
sp|A5IMA0|RS5_THEP1 30S ribosomal protein S5 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) |
Align length |
63 |
Score (bit) |
33.5 |
E-value |
0.88 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4V8K5 |
Definition |
tr|B4V8K5|B4V8K5_9ACTO Putative uncharacterized protein OS=Streptomyces sp. Mg1 |
Align length |
72 |
Score (bit) |
37.7 |
E-value |
0.53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951745|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_D14, 5' (611 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4V8K5|B4V8K5_9ACTO Putative uncharacterized protein OS=Strep... 38 0.53 tr|B4QMF6|B4QMF6_DROSI GD13470 OS=Drosophila simulans GN=GD13470... 34 5.8 tr|Q1JTF1|Q1JTF1_TOXGO Putative uncharacterized protein OS=Toxop... 34 7.6 tr|B6KQY9|B6KQY9_TOXGO Leucine rich repeat protein, putative OS=... 34 7.6 tr|A8XSF3|A8XSF3_CAEBR Putative uncharacterized protein OS=Caeno... 34 7.6 tr|A5DR83|A5DR83_PICGU Putative uncharacterized protein OS=Pichi... 34 7.6 tr|B1LBM3|B1LBM3_THESQ Ribosomal protein S5 OS=Thermotoga sp. (s... 33 10.0 tr|B7RFH6|B7RFH6_9THEM Ribosomal protein S5 OS=Marinitoga piezop... 33 10.0 tr|B4HYN6|B4HYN6_DROSE GM12858 OS=Drosophila sechellia GN=GM1285... 33 10.0
>tr|B4V8K5|B4V8K5_9ACTO Putative uncharacterized protein OS=Streptomyces sp. Mg1 GN=SSAG_04083 PE=4 SV=1 Length = 1094
Score = 37.7 bits (86), Expect = 0.53 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +3
Query: 57 KKKTPKRKTLSSRYSAILPSKRRKLGLNTIRDPVISLGETHHAPEACHAAVSPKSTNASE 236 K+K P ++ R +A +P++R L R+P ++ G AP A A V + AS Sbjct: 505 KRKAPTKRARRLRTAAAVPTQRAPLAPQPPREPDVAAGVEPEAPAALEAPVQLSLSEASA 564
Query: 237 V-PAKEKEARHS 269 V PA+ AR+S Sbjct: 565 VLPAEAGPARNS 576
>tr|B4QMF6|B4QMF6_DROSI GD13470 OS=Drosophila simulans GN=GD13470 PE=4 SV=1 Length = 1046
Score = 34.3 bits (77), Expect = 5.8 Identities = 22/54 (40%), Positives = 28/54 (51%) Frame = +3
Query: 108 LPSKRRKLGLNTIRDPVISLGETHHAPEACHAAVSPKSTNASEVPAKEKEARHS 269 +P+ RRK+ DP I HH A AA+ P +TN SE A EK AR + Sbjct: 519 IPAMRRKMS-----DPDI-----HHGTSAMLAALQPDTTNLSESLASEKNARRT 562
>tr|Q1JTF1|Q1JTF1_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii RH GN=TgIa.0690c PE=4 SV=1 Length = 774
Score = 33.9 bits (76), Expect = 7.6 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 8/94 (8%) Frame = +3
Query: 18 GKPLDLSSPNSLSKKKTPKRKTL---SSRYSAILPSKRRKL--GLNTIRDPVISLGETHH 182 G P + SP S K+TPK+ ++ S A L S RR L G++T + G + Sbjct: 81 GNPSSIPSPVSKKVKETPKQTSVGGESDAKRATLASPRRPLFSGVHTAQS-----GAEKN 135
Query: 183 APEACHAAVSPKSTNASEVPAKEKEAR---HSGT 275 AP++ + S S++ S+ +E EAR SGT Sbjct: 136 APKSAASLSSSASSSWSKGEFRENEARREERSGT 169
>tr|B6KQY9|B6KQY9_TOXGO Leucine rich repeat protein, putative OS=Toxoplasma gondii ME49 GN=TGME49_094930 PE=4 SV=1 Length = 704
Score = 33.9 bits (76), Expect = 7.6 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 8/94 (8%) Frame = +3
Query: 18 GKPLDLSSPNSLSKKKTPKRKTL---SSRYSAILPSKRRKL--GLNTIRDPVISLGETHH 182 G P + SP S K+TPK+ ++ S A L S RR L G++T + G + Sbjct: 11 GNPSSIPSPVSKKVKETPKQTSVGGESDAKRATLASPRRPLFSGVHTAQS-----GAEKN 65
Query: 183 APEACHAAVSPKSTNASEVPAKEKEAR---HSGT 275 AP++ + S S++ S+ +E EAR SGT Sbjct: 66 APKSAASLSSSASSSWSKGEFRENEARREERSGT 99
>tr|A8XSF3|A8XSF3_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG18321 PE=4 SV=1 Length = 512
Score = 33.9 bits (76), Expect = 7.6 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%) Frame = +3
Query: 33 LSSPNSLSKKKTPKRKTLSSRYSAILPSKRRKLGLNTIRDPVISLG---ETHHAPEACHA 203 +SSP+S S K+TP T SS+ +I P+K N D ++LG +T++ A H+ Sbjct: 403 ISSPSSFSAKQTPTSPTNSSQGFSI-PNKS-----NAFAD--LALGKVMKTNYGQSALHS 454
Query: 204 AVSPKSTNASEVP 242 A +P +T +P Sbjct: 455 APAPSTTGNQSIP 467
>tr|A5DR83|A5DR83_PICGU Putative uncharacterized protein OS=Pichia guilliermondii GN=PGUG_05784 PE=4 SV=2 Length = 644
Score = 33.9 bits (76), Expect = 7.6 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +3
Query: 3 RRPRTGKPLDLSS-PNSLSKKKTPKRKTLSSRYSAILPSKRRK--------LGLNTIRDP 155 R P + +DL NSLS +++PKR L + +L +RK +G+N + Sbjct: 211 RAPLFFRSVDLDRYVNSLSTEESPKRNLLLVNKADLLTETQRKAWADYFNDVGINYVFFS 270
Query: 156 VISLGETHHAPEACHAAVSPKSTNASEVPAKEKEA 260 + E A A AA + + T++ P ++ +A Sbjct: 271 AVRAAEQTEAELAAEAAAAERETDSDSEPEQDSDA 305
>tr|B1LBM3|B1LBM3_THESQ Ribosomal protein S5 OS=Thermotoga sp. (strain RQ2) GN=TRQ2_1377 PE=3 SV=1 Length = 178
Score = 33.5 bits (75), Expect = 10.0 Identities = 22/63 (34%), Positives = 29/63 (46%) Frame = +3
Query: 54 SKKKTPKRKTLSSRYSAILPSKRRKLGLNTIRDPVISLGETHHAPEACHAAVSPKSTNAS 233 + K T K LS R AI+ +K K+GL +G+ PEA A+S N Sbjct: 25 TSKVTKGGKNLSFRVVAIVGNKNGKVGLG--------IGKAREVPEAIRKAISAAKRNII 76
Query: 234 EVP 242 EVP Sbjct: 77 EVP 79
>tr|B7RFH6|B7RFH6_9THEM Ribosomal protein S5 OS=Marinitoga piezophila KA3 GN=rpsE PE=4 SV=1 Length = 178
Score = 33.5 bits (75), Expect = 10.0 Identities = 22/63 (34%), Positives = 29/63 (46%) Frame = +3
Query: 54 SKKKTPKRKTLSSRYSAILPSKRRKLGLNTIRDPVISLGETHHAPEACHAAVSPKSTNAS 233 + K T K LS R AI+ +K K+GL +G+ PEA A+S N Sbjct: 25 TSKVTKGGKNLSFRVVAIVGNKNGKVGLG--------IGKAREVPEAIRKAISAAKRNII 76
Query: 234 EVP 242 EVP Sbjct: 77 EVP 79
>tr|B4HYN6|B4HYN6_DROSE GM12858 OS=Drosophila sechellia GN=GM12858 PE=4 SV=1 Length = 682
Score = 33.5 bits (75), Expect = 10.0 Identities = 21/77 (27%), Positives = 37/77 (48%) Frame = +3
Query: 21 KPLDLSSPNSLSKKKTPKRKTLSSRYSAILPSKRRKLGLNTIRDPVISLGETHHAPEACH 200 KPL L+ P S PK++ ++ + + K + +++DPV S+ + A ++ Sbjct: 119 KPLILAPPES---PVPPKKQVKKTKAAPVEAKKEQAPAKKSVQDPVPSIKKVPAAKKSGQ 175
Query: 201 AAVSPKSTNASEVPAKE 251 AV K T E P K+ Sbjct: 176 TAVQTKKTAKPEKPGKQ 192
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