DK951716 |
Clone id |
TST38A01NGRL0012_C08 |
Library |
TST38 |
Length |
588 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_C08. 5' end sequence. |
Accession |
DK951716 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CGAGGAATTGCTACTCCCTCCAATGTTTATCCTAGAATAAATGGAGGAATGGGACATACT GAAACATCACGACAATCCAGGTGGTCAACCGGAAGAAAACTTGCTGGAATGGGTGCAGAC CAATCTCCAGATGTTTCGGTGAACTCTCCAAGGCTGGATGCAATACCTCAGTTTTCTCTC ACTACCAACGAAGCAATGCCTACCAGGAAAGGCCTAACGAATCATGAAAGGAACAAAACT TTGGAGAGTGCTCTTGCCAAGTTTAGAGAGGCATTACAGAGGGAGAGCTCTTCTAGACAG AGTAGTCGGAGGAAAAGCATTGCTGATGTACACTGCCAGCCAGAAAGGATTTTCTCCAAG CCTCAGCATGGCTGTGATAATGACTACAAAGTAAAAACACAGGATAAAGAGGCCATACAG GTCCATGAGCGGGTGTCGTCACCTGTCAAGTCAAAGTACAATGATGTAATACATGTTATT CGACACAGCACTTTCAAAATTGGAGATCATACAGATTGTAGTGCTGATATGGACTACAAT AAGCTCTTGAGGCCAGAGATGGACACATTTTCTATACCCAATAATGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q94CU5 |
Definition |
sp|Q94CU5|NEK5_ORYSJ Serine/threonine-protein kinase Nek5 OS=Oryza sativa subsp. japonica |
Align length |
68 |
Score (bit) |
39.7 |
E-value |
0.011 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RQH0 |
Definition |
tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
187 |
Score (bit) |
66.2 |
E-value |
1.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951716|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_C08, 5' (588 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment) OS=Physcomit... 66 1e-09 tr|A2WXA0|A2WXA0_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.044 tr|Q5HC47|Q5HC47_EHRRW Putative uncharacterized protein OS=Ehrli... 38 0.37 tr|Q5FFB1|Q5FFB1_EHRRG Putative uncharacterized protein OS=Ehrli... 38 0.37 tr|B8AN30|B8AN30_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.64 tr|B7EMV6|B7EMV6_ORYSJ cDNA clone:J033073A22, full insert sequen... 37 0.64 tr|A3AKP5|A3AKP5_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.64 tr|A5BFG7|A5BFG7_VITVI Putative uncharacterized protein OS=Vitis... 37 0.83 tr|A7PGD0|A7PGD0_VITVI Chromosome chr6 scaffold_15, whole genome... 37 1.1 tr|B6PLG5|B6PLG5_BRAFL Putative uncharacterized protein OS=Branc... 36 1.8 tr|B6NW36|B6NW36_BRAFL Putative uncharacterized protein OS=Branc... 36 1.8 tr|B7EKP8|B7EKP8_ORYSJ cDNA clone:J023075D08, full insert sequen... 35 4.1 tr|Q7PDQ1|Q7PDQ1_PLAYO ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 OS=Pl... 35 4.1 tr|B0E7B0|B0E7B0_ENTDI Putative uncharacterized protein OS=Entam... 35 4.1 tr|B4NL74|B4NL74_DROWI GK13236 OS=Drosophila willistoni GN=GK132... 34 5.4 tr|Q48EP3|Q48EP3_PSE14 Multidrug/solvent tranporter OS=Pseudomon... 34 7.1 tr|Q727N9|Q727N9_DESVH Multidrug resistance protein OS=Desulfovi... 33 9.2 tr|A1VAQ5|A1VAQ5_DESVV Transporter, hydrophobe/amphiphile efflux... 33 9.2
>tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_69270 PE=4 SV=1 Length = 811
Score = 66.2 bits (160), Expect = 1e-09 Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 29/187 (15%) Frame = +1
Query: 64 TSRQSRWSTGRKLAGMGADQ-SPDVSVNSPRLDAIPQFSLTTNEAMPTRKGLTNHERNKT 240 ++R S +G + +G + SP+VSVN+PRLD IP+F LT + P L +HE Sbjct: 490 SNRSSPSESGNIIQELGLNNHSPNVSVNAPRLDLIPEFKLTADPE-PYSSQLASHEIRMP 548
Query: 241 LESALAKFREALQXXXXXXXXXXXXXIADVHCQPERIF---------------------- 354 +E KF ++ P++ Sbjct: 549 MERP--KFSSSVMPTTTRSHIAVVSPRYSQQVMPKQTTEPRVSASPNRPDSSLALPASET 606
Query: 355 SKPQHGCDNDYKV--KTQDKEAIQVHERVSSP---VKSKYNDVIHVIRHSTFKIGDHTDC 519 +KP + + + KTQ+K IQ++E+ +P + +NDVIHVIRHSTF++G +D Sbjct: 607 NKPLYSMHMETSIFDKTQEKGTIQINEKSPAPPAPARPAFNDVIHVIRHSTFRLGATSDH 666
Query: 520 S-ADMDY 537 S D DY Sbjct: 667 SHTDADY 673
>tr|A2WXA0|A2WXA0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04545 PE=4 SV=1 Length = 1147
Score = 41.2 bits (95), Expect = 0.044 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 11/68 (16%) Frame = +1
Query: 415 IQVHERVSSP-VKSKYNDVIHVIRHSTFKI-GDHTDC-SADM-----DYNKLL---RPEM 561 IQ ER SSP + DVIHVIRHS+F++ G+ +A+M D KLL R EM Sbjct: 744 IQSLERTSSPHLNPPIEDVIHVIRHSSFRVCGEQAVAENAEMGVQSSDVGKLLNVVREEM 803
Query: 562 DTFSIPNN 585 D+ SIP+N Sbjct: 804 DSRSIPSN 811
>tr|Q5HC47|Q5HC47_EHRRW Putative uncharacterized protein OS=Ehrlichia ruminantium (strain Welgevonden) GN=ERWE_CDS_01250 PE=4 SV=1 Length = 564
Score = 38.1 bits (87), Expect = 0.37 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1
Query: 457 YNDVIHVIRHSTFKIGDHTDCSADMDYNK 543 YN + ++RH+ F I H DCS D+D NK Sbjct: 257 YNTAVKILRHTNFYINPHPDCSNDIDMNK 285
>tr|Q5FFB1|Q5FFB1_EHRRG Putative uncharacterized protein OS=Ehrlichia ruminantium (strain Gardel) GN=ERGA_CDS_01210 PE=4 SV=1 Length = 565
Score = 38.1 bits (87), Expect = 0.37 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +1
Query: 457 YNDVIHVIRHSTFKIGDHTDCSADMDYNK 543 YN + ++R++ F I HTDCS D+D NK Sbjct: 258 YNTAVKILRYTNFYINPHTDCSNDIDMNK 286
>tr|B8AN30|B8AN30_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12738 PE=4 SV=1 Length = 555
Score = 37.4 bits (85), Expect = 0.64 Identities = 17/30 (56%), Positives = 22/30 (73%) Frame = +1
Query: 121 QSPDVSVNSPRLDAIPQFSLTTNEAMPTRK 210 +SPDVSVNSPR+D I +F L ++E P K Sbjct: 395 ESPDVSVNSPRIDRIAEFPLASSEDPPFLK 424
>tr|B7EMV6|B7EMV6_ORYSJ cDNA clone:J033073A22, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 599
Score = 37.4 bits (85), Expect = 0.64 Identities = 17/30 (56%), Positives = 22/30 (73%) Frame = +1
Query: 121 QSPDVSVNSPRLDAIPQFSLTTNEAMPTRK 210 +SPDVSVNSPR+D I +F L ++E P K Sbjct: 439 ESPDVSVNSPRIDRIAEFPLASSEDPPFLK 468
>tr|A3AKP5|A3AKP5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011367 PE=4 SV=1 Length = 590
Score = 37.4 bits (85), Expect = 0.64 Identities = 17/30 (56%), Positives = 22/30 (73%) Frame = +1
Query: 121 QSPDVSVNSPRLDAIPQFSLTTNEAMPTRK 210 +SPDVSVNSPR+D I +F L ++E P K Sbjct: 430 ESPDVSVNSPRIDRIAEFPLASSEDPPFLK 459
>tr|A5BFG7|A5BFG7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032788 PE=4 SV=1 Length = 1177
Score = 37.0 bits (84), Expect = 0.83 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Frame = +1
Query: 403 DKEAIQVHERVSSPVKSKYNDVIHVIRHSTFKIGDH----TDCSADMDYNKLLRPEMDTF 570 D + + + S + S ++DVIHVIRHS+F++G +MD KLL D Sbjct: 980 DDKFTLIEKPASGHLPSAFDDVIHVIRHSSFRVGVEQPVIETVERNMDVGKLLNVVRDEL 1039
Query: 571 SIPN 582 + N Sbjct: 1040 EMRN 1043
>tr|A7PGD0|A7PGD0_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017494001 PE=4 SV=1 Length = 936
Score = 36.6 bits (83), Expect = 1.1 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +1
Query: 421 VHERVSSPVKSKYNDVIHVIRHSTFKIGDH----TDCSADMDYNKLLRPEMDTFSIPN 582 + + S + S ++DVIHVIRHS+F++G +MD KLL D + N Sbjct: 745 IEKPASGHLPSAFDDVIHVIRHSSFRVGVEQPVIETVERNMDVGKLLNVVRDELEMRN 802
>tr|B6PLG5|B6PLG5_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_108375 PE=4 SV=1 Length = 155
Score = 35.8 bits (81), Expect = 1.8 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +3
Query: 84 VNRKKTCWNGCRPISRCFGELSKAGCNTSVFSHYQRSNA-YQERPNES*KEQNFGECSC 257 + R++TC NG P+ R + + AGC VF SN Y E P +Q F C C Sbjct: 81 LTRRQTCGNGADPV-RQYAVSNPAGCEYLVFCDVDHSNGDYNECPRRHVLDQFFMACLC 138
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