DK951716
Clone id TST38A01NGRL0012_C08
Library
Length 588
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_C08. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
CGAGGAATTGCTACTCCCTCCAATGTTTATCCTAGAATAAATGGAGGAATGGGACATACT
GAAACATCACGACAATCCAGGTGGTCAACCGGAAGAAAACTTGCTGGAATGGGTGCAGAC
CAATCTCCAGATGTTTCGGTGAACTCTCCAAGGCTGGATGCAATACCTCAGTTTTCTCTC
ACTACCAACGAAGCAATGCCTACCAGGAAAGGCCTAACGAATCATGAAAGGAACAAAACT
TTGGAGAGTGCTCTTGCCAAGTTTAGAGAGGCATTACAGAGGGAGAGCTCTTCTAGACAG
AGTAGTCGGAGGAAAAGCATTGCTGATGTACACTGCCAGCCAGAAAGGATTTTCTCCAAG
CCTCAGCATGGCTGTGATAATGACTACAAAGTAAAAACACAGGATAAAGAGGCCATACAG
GTCCATGAGCGGGTGTCGTCACCTGTCAAGTCAAAGTACAATGATGTAATACATGTTATT
CGACACAGCACTTTCAAAATTGGAGATCATACAGATTGTAGTGCTGATATGGACTACAAT
AAGCTCTTGAGGCCAGAGATGGACACATTTTCTATACCCAATAATGCC
■■Homology search results ■■ -
sp_hit_id Q94CU5
Definition sp|Q94CU5|NEK5_ORYSJ Serine/threonine-protein kinase Nek5 OS=Oryza sativa subsp. japonica
Align length 68
Score (bit) 39.7
E-value 0.011
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951716|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_C08, 5'
(588 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q94CU5|NEK5_ORYSJ Serine/threonine-protein kinase Nek5 OS=Ory... 40 0.011
sp|Q10GB1|NEK1_ORYSJ Serine/threonine-protein kinase Nek1 OS=Ory... 37 0.056
sp|Q2QMH1|NEK2_ORYSJ Serine/threonine-protein kinase Nek2 OS=Ory... 35 0.37
sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2 OS=Ory... 35 0.37
sp|Q8RX66|NEK3_ARATH Serine/threonine-protein kinase Nek3 OS=Ara... 33 0.81
sp|Q6ZEZ5|NEK3_ORYSJ Serine/threonine-protein kinase Nek3 OS=Ory... 33 1.4
sp|Q0WPH8|NEK5_ARATH Serine/threonine-protein kinase Nek5 OS=Ara... 31 4.0
sp|O80898|CSLB1_ARATH Cellulose synthase-like protein B1 OS=Arab... 31 4.0
sp|Q2JMC1|MRAY_SYNJB Phospho-N-acetylmuramoyl-pentapeptide-trans... 30 6.8
sp|Q9HWY1|RIBA_PSEAE GTP cyclohydrolase-2 OS=Pseudomonas aerugin... 30 6.9
sp|O52248|TTGB_PSEPU Toluene efflux pump membrane transporter tt... 30 9.0
sp|A6V055|RIBA_PSEA7 GTP cyclohydrolase-2 OS=Pseudomonas aerugin... 30 9.0
sp|Q9KJC2|ARPB_PSEPU Antibiotic efflux pump membrane transporter... 30 9.0

>sp|Q94CU5|NEK5_ORYSJ Serine/threonine-protein kinase Nek5 OS=Oryza
sativa subsp. japonica GN=NEK5 PE=2 SV=1
Length = 943

Score = 39.7 bits (91), Expect = 0.011
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 11/68 (16%)
Frame = +1

Query: 415 IQVHERVSSP-VKSKYNDVIHVIRHSTFKI-GDHTDC-SADM-----DYNKLL---RPEM 561
IQ ER SSP + DVIHVIRHS+F++ G+ +A+M D KLL R E+
Sbjct: 744 IQSLERTSSPHLNPPIEDVIHVIRHSSFRVCGEQAVAENAEMGVQSSDVGKLLNVVREEV 803

Query: 562 DTFSIPNN 585
D+ SIP+N
Sbjct: 804 DSRSIPSN 811


>sp|Q10GB1|NEK1_ORYSJ Serine/threonine-protein kinase Nek1 OS=Oryza
sativa subsp. japonica GN=NEK1 PE=2 SV=1
Length = 599

Score = 37.4 bits (85), Expect = 0.056
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1

Query: 121 QSPDVSVNSPRLDAIPQFSLTTNEAMPTRK 210
+SPDVSVNSPR+D I +F L ++E P K
Sbjct: 439 ESPDVSVNSPRIDRIAEFPLASSEDPPFLK 468


>sp|Q2QMH1|NEK2_ORYSJ Serine/threonine-protein kinase Nek2 OS=Oryza
sativa subsp. japonica GN=NEK2 PE=2 SV=1
Length = 591

Score = 34.7 bits (78), Expect = 0.37
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1

Query: 88 TGRKLAGMGADQSPDVSVNSPRLDAIPQFSLTTNE 192
T R ++ + SPDVSVN+PR+D I +F L ++E
Sbjct: 428 TKRSISILEQLDSPDVSVNAPRIDRIAEFPLASSE 462


>sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2 OS=Oryza
sativa subsp. indica GN=NEK2 PE=2 SV=1
Length = 591

Score = 34.7 bits (78), Expect = 0.37
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1

Query: 88 TGRKLAGMGADQSPDVSVNSPRLDAIPQFSLTTNE 192
T R ++ + SPDVSVN+PR+D I +F L ++E
Sbjct: 428 TKRSISILEQLDSPDVSVNAPRIDRIAEFPLASSE 462


>sp|Q8RX66|NEK3_ARATH Serine/threonine-protein kinase Nek3
OS=Arabidopsis thaliana GN=NEK3 PE=2 SV=1
Length = 568

Score = 33.5 bits (75), Expect = 0.81
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1

Query: 124 SPDVSVNSPRLDAIPQFSLTTNEAMP 201
SPDVSVNSPR+D I +F L + E MP
Sbjct: 409 SPDVSVNSPRIDRI-KFPLASYEEMP 433


>sp|Q6ZEZ5|NEK3_ORYSJ Serine/threonine-protein kinase Nek3 OS=Oryza
sativa subsp. japonica GN=NEK3 PE=2 SV=1
Length = 585

Score = 32.7 bits (73), Expect = 1.4
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1

Query: 121 QSPDVSVNSPRLDAIPQF---SLTTNEAMPTRK 210
+SPDVSVNSPR+D I +F S + PT K
Sbjct: 431 KSPDVSVNSPRIDRIAEFPIPSFDDEQLHPTTK 463


>sp|Q0WPH8|NEK5_ARATH Serine/threonine-protein kinase Nek5
OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1
Length = 956

Score = 31.2 bits (69), Expect = 4.0
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1

Query: 376 DNDYKVKTQDKEAIQVHERVSSPVKSKYNDVIHVIRHSTFKIG 504
DN V +Q+ A++ + S P +DVIHVIRHS+F++G
Sbjct: 734 DNKTSVMSQNS-ALEKNNSHSHP-HPVVDDVIHVIRHSSFRVG 774


>sp|O80898|CSLB1_ARATH Cellulose synthase-like protein B1
OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2
Length = 757

Score = 31.2 bits (69), Expect = 4.0
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1

Query: 204 GRHCF--VGSERKLRYCIQPWRVHRNIWRLVCTHSSKFS 94
G HC + L Y +Q W V +++WR+V T S FS
Sbjct: 579 GIHCLYTLWEFMSLGYSVQSWLVSQSVWRIVATSSWLFS 617


>sp|Q2JMC1|MRAY_SYNJB
Phospho-N-acetylmuramoyl-pentapeptide-transferase
OS=Synechococcus sp. GN=mraY PE=3 SV=1
Length = 340

Score = 30.4 bits (67), Expect = 6.8
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2

Query: 41 MEEWDILKHHDNPGGQPEENLLEWVQTNLQMFR*TLQGWMQYLSFLSLPTKQCLPG 208
+++W +++ N G P+ LL V L G+ YL++ +PT LPG
Sbjct: 109 LDDWLVIRQQSNKGLSPQHKLLLQVGVAL--------GFCVYLAWQGIPTSLTLPG 156


>sp|Q9HWY1|RIBA_PSEAE GTP cyclohydrolase-2 OS=Pseudomonas aeruginosa
GN=ribA PE=3 SV=1
Length = 205

Score = 30.4 bits (67), Expect = 6.9
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1

Query: 4 GIATPSNVYPRINGGMGHTETSRQSRWSTGRK--------LAGMGADQSPDVSVNSPRLD 159
G+ Y +GG E + Q + ++ LA +G ++ N ++
Sbjct: 97 GLLNKIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVK 156

Query: 160 AIPQFSLTTNEAMPTRKGLTNHER 231
A+ +++T E +P +KGL H R
Sbjct: 157 ALESYAITVAERVPLQKGLNKHNR 180


tr_hit_id A9RQH0
Definition tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 187
Score (bit) 66.2
E-value 1.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951716|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_C08, 5'
(588 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment) OS=Physcomit... 66 1e-09
tr|A2WXA0|A2WXA0_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.044
tr|Q5HC47|Q5HC47_EHRRW Putative uncharacterized protein OS=Ehrli... 38 0.37
tr|Q5FFB1|Q5FFB1_EHRRG Putative uncharacterized protein OS=Ehrli... 38 0.37
tr|B8AN30|B8AN30_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.64
tr|B7EMV6|B7EMV6_ORYSJ cDNA clone:J033073A22, full insert sequen... 37 0.64
tr|A3AKP5|A3AKP5_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.64
tr|A5BFG7|A5BFG7_VITVI Putative uncharacterized protein OS=Vitis... 37 0.83
tr|A7PGD0|A7PGD0_VITVI Chromosome chr6 scaffold_15, whole genome... 37 1.1
tr|B6PLG5|B6PLG5_BRAFL Putative uncharacterized protein OS=Branc... 36 1.8
tr|B6NW36|B6NW36_BRAFL Putative uncharacterized protein OS=Branc... 36 1.8
tr|B7EKP8|B7EKP8_ORYSJ cDNA clone:J023075D08, full insert sequen... 35 4.1
tr|Q7PDQ1|Q7PDQ1_PLAYO ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 OS=Pl... 35 4.1
tr|B0E7B0|B0E7B0_ENTDI Putative uncharacterized protein OS=Entam... 35 4.1
tr|B4NL74|B4NL74_DROWI GK13236 OS=Drosophila willistoni GN=GK132... 34 5.4
tr|Q48EP3|Q48EP3_PSE14 Multidrug/solvent tranporter OS=Pseudomon... 34 7.1
tr|Q727N9|Q727N9_DESVH Multidrug resistance protein OS=Desulfovi... 33 9.2
tr|A1VAQ5|A1VAQ5_DESVV Transporter, hydrophobe/amphiphile efflux... 33 9.2

>tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment) OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_69270 PE=4 SV=1
Length = 811

Score = 66.2 bits (160), Expect = 1e-09
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Frame = +1

Query: 64 TSRQSRWSTGRKLAGMGADQ-SPDVSVNSPRLDAIPQFSLTTNEAMPTRKGLTNHERNKT 240
++R S +G + +G + SP+VSVN+PRLD IP+F LT + P L +HE
Sbjct: 490 SNRSSPSESGNIIQELGLNNHSPNVSVNAPRLDLIPEFKLTADPE-PYSSQLASHEIRMP 548

Query: 241 LESALAKFREALQXXXXXXXXXXXXXIADVHCQPERIF---------------------- 354
+E KF ++ P++
Sbjct: 549 MERP--KFSSSVMPTTTRSHIAVVSPRYSQQVMPKQTTEPRVSASPNRPDSSLALPASET 606

Query: 355 SKPQHGCDNDYKV--KTQDKEAIQVHERVSSP---VKSKYNDVIHVIRHSTFKIGDHTDC 519
+KP + + + KTQ+K IQ++E+ +P + +NDVIHVIRHSTF++G +D
Sbjct: 607 NKPLYSMHMETSIFDKTQEKGTIQINEKSPAPPAPARPAFNDVIHVIRHSTFRLGATSDH 666

Query: 520 S-ADMDY 537
S D DY
Sbjct: 667 SHTDADY 673


>tr|A2WXA0|A2WXA0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04545 PE=4 SV=1
Length = 1147

Score = 41.2 bits (95), Expect = 0.044
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 11/68 (16%)
Frame = +1

Query: 415 IQVHERVSSP-VKSKYNDVIHVIRHSTFKI-GDHTDC-SADM-----DYNKLL---RPEM 561
IQ ER SSP + DVIHVIRHS+F++ G+ +A+M D KLL R EM
Sbjct: 744 IQSLERTSSPHLNPPIEDVIHVIRHSSFRVCGEQAVAENAEMGVQSSDVGKLLNVVREEM 803

Query: 562 DTFSIPNN 585
D+ SIP+N
Sbjct: 804 DSRSIPSN 811


>tr|Q5HC47|Q5HC47_EHRRW Putative uncharacterized protein
OS=Ehrlichia ruminantium (strain Welgevonden)
GN=ERWE_CDS_01250 PE=4 SV=1
Length = 564

Score = 38.1 bits (87), Expect = 0.37
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1

Query: 457 YNDVIHVIRHSTFKIGDHTDCSADMDYNK 543
YN + ++RH+ F I H DCS D+D NK
Sbjct: 257 YNTAVKILRHTNFYINPHPDCSNDIDMNK 285


>tr|Q5FFB1|Q5FFB1_EHRRG Putative uncharacterized protein
OS=Ehrlichia ruminantium (strain Gardel)
GN=ERGA_CDS_01210 PE=4 SV=1
Length = 565

Score = 38.1 bits (87), Expect = 0.37
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1

Query: 457 YNDVIHVIRHSTFKIGDHTDCSADMDYNK 543
YN + ++R++ F I HTDCS D+D NK
Sbjct: 258 YNTAVKILRYTNFYINPHTDCSNDIDMNK 286


>tr|B8AN30|B8AN30_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12738 PE=4 SV=1
Length = 555

Score = 37.4 bits (85), Expect = 0.64
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1

Query: 121 QSPDVSVNSPRLDAIPQFSLTTNEAMPTRK 210
+SPDVSVNSPR+D I +F L ++E P K
Sbjct: 395 ESPDVSVNSPRIDRIAEFPLASSEDPPFLK 424


>tr|B7EMV6|B7EMV6_ORYSJ cDNA clone:J033073A22, full insert sequence
OS=Oryza sativa subsp. japonica PE=2 SV=1
Length = 599

Score = 37.4 bits (85), Expect = 0.64
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1

Query: 121 QSPDVSVNSPRLDAIPQFSLTTNEAMPTRK 210
+SPDVSVNSPR+D I +F L ++E P K
Sbjct: 439 ESPDVSVNSPRIDRIAEFPLASSEDPPFLK 468


>tr|A3AKP5|A3AKP5_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_011367 PE=4 SV=1
Length = 590

Score = 37.4 bits (85), Expect = 0.64
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1

Query: 121 QSPDVSVNSPRLDAIPQFSLTTNEAMPTRK 210
+SPDVSVNSPR+D I +F L ++E P K
Sbjct: 430 ESPDVSVNSPRIDRIAEFPLASSEDPPFLK 459


>tr|A5BFG7|A5BFG7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032788 PE=4 SV=1
Length = 1177

Score = 37.0 bits (84), Expect = 0.83
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1

Query: 403 DKEAIQVHERVSSPVKSKYNDVIHVIRHSTFKIGDH----TDCSADMDYNKLLRPEMDTF 570
D + + + S + S ++DVIHVIRHS+F++G +MD KLL D
Sbjct: 980 DDKFTLIEKPASGHLPSAFDDVIHVIRHSSFRVGVEQPVIETVERNMDVGKLLNVVRDEL 1039

Query: 571 SIPN 582
+ N
Sbjct: 1040 EMRN 1043


>tr|A7PGD0|A7PGD0_VITVI Chromosome chr6 scaffold_15, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017494001
PE=4 SV=1
Length = 936

Score = 36.6 bits (83), Expect = 1.1
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1

Query: 421 VHERVSSPVKSKYNDVIHVIRHSTFKIGDH----TDCSADMDYNKLLRPEMDTFSIPN 582
+ + S + S ++DVIHVIRHS+F++G +MD KLL D + N
Sbjct: 745 IEKPASGHLPSAFDDVIHVIRHSSFRVGVEQPVIETVERNMDVGKLLNVVRDELEMRN 802


>tr|B6PLG5|B6PLG5_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_108375 PE=4 SV=1
Length = 155

Score = 35.8 bits (81), Expect = 1.8
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3

Query: 84 VNRKKTCWNGCRPISRCFGELSKAGCNTSVFSHYQRSNA-YQERPNES*KEQNFGECSC 257
+ R++TC NG P+ R + + AGC VF SN Y E P +Q F C C
Sbjct: 81 LTRRQTCGNGADPV-RQYAVSNPAGCEYLVFCDVDHSNGDYNECPRRHVLDQFFMACLC 138