DK951652
Clone id TST38A01NGRL0011_P15
Library
Length 647
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_P15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
TGACGAAAGAATTTTTTGCGGAGTATGTAAAGAAGGACAATGCAAGGAGGCGTCAGGGAC
TTTATGTGATGAATCCCAATAAATTTAGAGCTTGTGAGTTTTTATTGCGTTTCCATGAGC
AACAGAGAGGAGACAAAATCATTGTGTTCTCTGATAACCTGTTTGCCTTGCGGGAGTATG
CTACAAAGCTGAGAAAGCCATGCATCTATGGTGCCACAAGTCATCAAGAGCGCACACATA
TACTAAATGCTTTCAAGCATAATCCTCAGGTTAACACAGTATTTCTGTCTAAGGTGGGGG
ACAACTCTATTGATATCCCTGAAGCAAATGTGATCATTCAGATTTCGTCACATGCTGGTT
CACGACGGCAAGAGGCACAGCGTTTAGGACGCATTTTGCGTGCCAAGGGTAAGCCGAAAG
ATAGAGGACCAGGAGGGGCAGAGGAATTCAATGCATTTTTCTACTCACTGGTGTCAACAG
ACACACAAGAAATGTATTTCTCTACAAAGAGGCAACAATTTTTGATTGATCAGGGTTATA
GTTTTAAGGTTTTGACAAGCATCCCCCCAGCTGATACAGGTCCGGAGCTCAGCTACTTCA
ATAAAAATGATCAATTAGATTTACTTACGAAGGTTTTGAATGCTGGG
■■Homology search results ■■ -
sp_hit_id Q38861
Definition sp|Q38861|XPB1_ARATH DNA repair helicase XPB1 OS=Arabidopsis thaliana
Align length 215
Score (bit) 352.0
E-value 7.0e-97
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951652|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_P15, 5'
(647 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q38861|XPB1_ARATH DNA repair helicase XPB1 OS=Arabidopsis tha... 352 7e-97
sp|Q9FUG4|XPB2_ARATH DNA repair helicase XPB2 OS=Arabidopsis tha... 351 2e-96
sp|Q5ZKK7|ERCC3_CHICK TFIIH basal transcription factor complex h... 254 3e-67
sp|Q4G005|ERCC3_RAT TFIIH basal transcription factor complex hel... 254 4e-67
sp|P49135|ERCC3_MOUSE TFIIH basal transcription factor complex h... 254 4e-67
sp|Q00578|RAD25_YEAST DNA repair helicase RAD25 OS=Saccharomyces... 253 5e-67
sp|Q5RA62|ERCC3_PONAB TFIIH basal transcription factor complex h... 253 8e-67
sp|Q60HG1|ERCC3_MACFA TFIIH basal transcription factor complex h... 253 8e-67
sp|P19447|ERCC3_HUMAN TFIIH basal transcription factor complex h... 253 8e-67
sp|Q1RMT1|ERCC3_BOVIN TFIIH basal transcription factor complex h... 253 8e-67
sp|Q7ZVV1|ERCC3_DANRE TFIIH basal transcription factor complex h... 251 2e-66
sp|O13768|ERCC3_SCHPO Probable DNA repair helicase ercc3 OS=Schi... 250 5e-66
sp|Q02870|ERCC3_DROME DNA excision repair protein haywire OS=Dro... 239 9e-63
sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS... 38 0.040
sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5 OS... 38 0.040
sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5 OS... 38 0.040
sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS... 38 0.040
sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helica... 38 0.052
sp|Q4R6M5|DDX5_MACFA Probable ATP-dependent RNA helicase DDX5 OS... 38 0.052
sp|A5DAC8|DBP3_PICGU ATP-dependent RNA helicase DBP3 OS=Pichia g... 37 0.12
sp|Q6CT46|DBP3_KLULA ATP-dependent RNA helicase DBP3 OS=Kluyvero... 37 0.12
sp|A3LRW2|DBP3_PICST ATP-dependent RNA helicase DBP3 OS=Pichia s... 36 0.15
sp|Q5APT8|DBP3_CANAL ATP-dependent RNA helicase DBP3 OS=Candida ... 36 0.20
sp|Q7S8J7|DCL1_NEUCR Dicer-like protein 1 OS=Neurospora crassa G... 35 0.26
sp|P20447|DBP3_YEAST ATP-dependent RNA helicase DBP3 OS=Saccharo... 35 0.26
sp|A6ZUA1|DBP3_YEAS7 ATP-dependent RNA helicase DBP3 OS=Saccharo... 35 0.26
sp|Q6CN92|SPB4_KLULA ATP-dependent rRNA helicase SPB4 OS=Kluyver... 35 0.34
sp|Q6FS54|DBP3_CANGA ATP-dependent RNA helicase DBP3 OS=Candida ... 35 0.34
sp|Q6BZ77|DBP3_DEBHA ATP-dependent RNA helicase DBP3 OS=Debaryom... 34 0.58
sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeosph... 34 0.75

>sp|Q38861|XPB1_ARATH DNA repair helicase XPB1 OS=Arabidopsis thaliana
GN=XPB1 PE=2 SV=3
Length = 767

Score = 352 bits (904), Expect = 7e-97
Identities = 175/215 (81%), Positives = 193/215 (89%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
TKEFFAEY+KK+N++++Q LYVMNPNKFRACEFL+RFHEQQRGDKIIVF+DNLFAL EYA
Sbjct: 482 TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 541

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
KLRKP IYGATSH ERT IL AFK + VNTVFLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 542 MKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 601

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAKGK +DR GG EE+NAFFYSLVSTDTQEMY+STKRQQFLIDQGYS
Sbjct: 602 RRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 661

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNAG 647
FKV+TS+PP D G LSY ++ +QL LL KV+NAG
Sbjct: 662 FKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAG 696


>sp|Q9FUG4|XPB2_ARATH DNA repair helicase XPB2 OS=Arabidopsis thaliana
GN=XPB2 PE=2 SV=1
Length = 766

Score = 351 bits (901), Expect = 2e-96
Identities = 175/215 (81%), Positives = 192/215 (89%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
TKEFFAEY+KK+N++++Q LYVMNPNKFRACEFL+RFHEQQRGDKIIVF+DNLFAL EYA
Sbjct: 482 TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 541

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
KLRKP IYGATSH ERT IL AFK + VNTVFLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 542 MKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 601

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAKGK +DR GG EE+NAFFYSLVSTDTQEMY+STKRQQFLIDQGYS
Sbjct: 602 RRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 661

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNAG 647
FKV+TS+PP D G L Y ++ +QL LL KVLNAG
Sbjct: 662 FKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAG 696


>sp|Q5ZKK7|ERCC3_CHICK TFIIH basal transcription factor complex
helicase XPB subunit OS=Gallus gallus GN=ERCC3 PE=2 SV=1
Length = 788

Score = 254 bits (649), Expect = 3e-67
Identities = 135/212 (63%), Positives = 165/212 (77%)
Frame = +3

Query: 9 EFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYATK 188
EF+ EYV ++R LY MNPNKFRAC+FL++FHE+ R DKIIVF+DN+FAL+EYA +
Sbjct: 514 EFYREYVAI-KTKKRILLYTMNPNKFRACQFLIKFHER-RNDKIIVFADNVFALKEYAIR 571

Query: 189 LRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRR 368
L KP IYG T+ ER IL FKHNP++NT+F+SKVGD S D+PEANV+IQISSH GSRR
Sbjct: 572 LGKPYIYGPTAQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRR 631

Query: 369 QEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYSFK 548
QEAQRLGR+LRAK +G AEE+NAFFYSLVS DTQEM +STKRQ+FL+DQGYSFK
Sbjct: 632 QEAQRLGRVLRAK-----KGM-VAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 685

Query: 549 VLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
V+T + + ELS+ +K +Q LL KVL A
Sbjct: 686 VITKLAGMEE-EELSFSSKEEQQQLLQKVLQA 716


>sp|Q4G005|ERCC3_RAT TFIIH basal transcription factor complex helicase
XPB subunit OS=Rattus norvegicus GN=Ercc3 PE=2 SV=1
Length = 782

Score = 254 bits (648), Expect = 4e-67
Identities = 135/212 (63%), Positives = 164/212 (77%)
Frame = +3

Query: 9 EFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYATK 188
EF+ EYV ++R LY MNPNKFRAC+FL++FHE+ R DKIIVF+DN+FAL+EYA +
Sbjct: 517 EFYREYVAI-KTKKRILLYTMNPNKFRACQFLIKFHER-RNDKIIVFADNVFALKEYAIR 574

Query: 189 LRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRR 368
L KP IYG TS ER IL FKHNP++NT+F+SKVGD S D+PEANV+IQISSH GSRR
Sbjct: 575 LNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRR 634

Query: 369 QEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYSFK 548
QEAQRLGR+LRAK +G AEE+NAFFYSLVS DTQEM +STKRQ+FL+DQGYSFK
Sbjct: 635 QEAQRLGRVLRAK-----KGM-VAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 688

Query: 549 VLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
V+T + + EL++ K +Q LL KVL A
Sbjct: 689 VITKLAGMEE-EELAFSTKEEQQQLLQKVLAA 719


>sp|P49135|ERCC3_MOUSE TFIIH basal transcription factor complex
helicase XPB subunit OS=Mus musculus GN=Ercc3 PE=2 SV=1
Length = 783

Score = 254 bits (648), Expect = 4e-67
Identities = 135/212 (63%), Positives = 164/212 (77%)
Frame = +3

Query: 9 EFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYATK 188
EF+ EYV ++R LY MNPNKFRAC+FL++FHE+ R DKIIVF+DN+FAL+EYA +
Sbjct: 518 EFYREYVAI-KTKKRILLYTMNPNKFRACQFLIKFHER-RNDKIIVFADNVFALKEYAIR 575

Query: 189 LRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRR 368
L KP IYG TS ER IL FKHNP++NT+F+SKVGD S D+PEANV+IQISSH GSRR
Sbjct: 576 LNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRR 635

Query: 369 QEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYSFK 548
QEAQRLGR+LRAK +G AEE+NAFFYSLVS DTQEM +STKRQ+FL+DQGYSFK
Sbjct: 636 QEAQRLGRVLRAK-----KGM-VAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 689

Query: 549 VLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
V+T + + EL++ K +Q LL KVL A
Sbjct: 690 VITKLAGMEE-EELAFSTKEEQQQLLQKVLAA 720


>sp|Q00578|RAD25_YEAST DNA repair helicase RAD25 OS=Saccharomyces
cerevisiae GN=RAD25 PE=1 SV=1
Length = 843

Score = 253 bits (647), Expect = 5e-67
Identities = 129/212 (60%), Positives = 166/212 (78%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
T EF+ EY++ + AR+R LY+MNP KF+AC+FL+++HE+ RGDKIIVFSDN++AL+EYA
Sbjct: 562 TAEFYQEYLR-ETARKRMLLYIMNPTKFQACQFLIQYHER-RGDKIIVFSDNVYALQEYA 619

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
K+ KP IYG+T QER +IL F++N Q+NT+FLSKVGD SID+PEA +IQISSH GS
Sbjct: 620 LKMGKPFIYGSTPQQERMNILQNFQYNDQINTIFLSKVGDTSIDLPEATCLIQISSHYGS 679

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAK + E FNAFFYSLVS DTQEMY+STKRQ FL+DQGY+
Sbjct: 680 RRQEAQRLGRILRAKRR-------NDEGFNAFFYSLVSKDTQEMYYSTKRQAFLVDQGYA 732

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVL 638
FKV+T + + P L+Y + ++ +LL +VL
Sbjct: 733 FKVITHLHGMENIPNLAYASPRERRELLQEVL 764


>sp|Q5RA62|ERCC3_PONAB TFIIH basal transcription factor complex
helicase XPB subunit OS=Pongo abelii GN=ERCC3 PE=2 SV=1
Length = 782

Score = 253 bits (645), Expect = 8e-67
Identities = 134/212 (63%), Positives = 164/212 (77%)
Frame = +3

Query: 9 EFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYATK 188
EF+ EYV ++R LY MNPNKFRAC+FL++FHE+ R DKIIVF+DN+FAL+EYA +
Sbjct: 517 EFYREYVAI-KTKKRILLYTMNPNKFRACQFLIKFHER-RNDKIIVFADNVFALKEYAIR 574

Query: 189 LRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRR 368
L KP IYG TS ER IL FKHNP++NT+F+SKVGD S D+PEANV+IQISSH GSRR
Sbjct: 575 LNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRR 634

Query: 369 QEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYSFK 548
QEAQRLGR+LRAK +G AEE+NAFFYSLVS DTQEM +STKRQ+FL+DQGYSFK
Sbjct: 635 QEAQRLGRVLRAK-----KGM-VAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 688

Query: 549 VLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
V+T + + +L++ K +Q LL KVL A
Sbjct: 689 VITKLAGMEE-EDLAFSTKEEQQQLLQKVLAA 719


>sp|Q60HG1|ERCC3_MACFA TFIIH basal transcription factor complex
helicase XPB subunit OS=Macaca fascicularis GN=ERCC3 PE=2
SV=1
Length = 782

Score = 253 bits (645), Expect = 8e-67
Identities = 134/212 (63%), Positives = 164/212 (77%)
Frame = +3

Query: 9 EFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYATK 188
EF+ EYV ++R LY MNPNKFRAC+FL++FHE+ R DKIIVF+DN+FAL+EYA +
Sbjct: 517 EFYREYVAI-KTKKRILLYTMNPNKFRACQFLIKFHER-RNDKIIVFADNVFALKEYAIR 574

Query: 189 LRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRR 368
L KP IYG TS ER IL FKHNP++NT+F+SKVGD S D+PEANV+IQISSH GSRR
Sbjct: 575 LNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRR 634

Query: 369 QEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYSFK 548
QEAQRLGR+LRAK +G AEE+NAFFYSLVS DTQEM +STKRQ+FL+DQGYSFK
Sbjct: 635 QEAQRLGRVLRAK-----KGM-VAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 688

Query: 549 VLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
V+T + + +L++ K +Q LL KVL A
Sbjct: 689 VITKLAGMEE-EDLAFSTKEEQQQLLQKVLAA 719


>sp|P19447|ERCC3_HUMAN TFIIH basal transcription factor complex
helicase XPB subunit OS=Homo sapiens GN=ERCC3 PE=1 SV=1
Length = 782

Score = 253 bits (645), Expect = 8e-67
Identities = 134/212 (63%), Positives = 164/212 (77%)
Frame = +3

Query: 9 EFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYATK 188
EF+ EYV ++R LY MNPNKFRAC+FL++FHE+ R DKIIVF+DN+FAL+EYA +
Sbjct: 517 EFYREYVAI-KTKKRILLYTMNPNKFRACQFLIKFHER-RNDKIIVFADNVFALKEYAIR 574

Query: 189 LRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRR 368
L KP IYG TS ER IL FKHNP++NT+F+SKVGD S D+PEANV+IQISSH GSRR
Sbjct: 575 LNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRR 634

Query: 369 QEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYSFK 548
QEAQRLGR+LRAK +G AEE+NAFFYSLVS DTQEM +STKRQ+FL+DQGYSFK
Sbjct: 635 QEAQRLGRVLRAK-----KGM-VAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 688

Query: 549 VLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
V+T + + +L++ K +Q LL KVL A
Sbjct: 689 VITKLAGMEE-EDLAFSTKEEQQQLLQKVLAA 719


>sp|Q1RMT1|ERCC3_BOVIN TFIIH basal transcription factor complex
helicase XPB subunit OS=Bos taurus GN=ERCC3 PE=2 SV=1
Length = 782

Score = 253 bits (645), Expect = 8e-67
Identities = 134/212 (63%), Positives = 164/212 (77%)
Frame = +3

Query: 9 EFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYATK 188
EF+ EYV ++R LY MNPNKFRAC+FL++FHE+ R DKIIVF+DN+FAL+EYA +
Sbjct: 517 EFYREYVAI-KTKKRILLYTMNPNKFRACQFLIKFHER-RNDKIIVFADNVFALKEYAIR 574

Query: 189 LRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRR 368
L KP IYG TS ER IL FKHNP++NT+F+SKVGD S D+PEANV+IQISSH GSRR
Sbjct: 575 LNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRR 634

Query: 369 QEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYSFK 548
QEAQRLGR+LRAK +G AEE+NAFFYSLVS DTQEM +STKRQ+FL+DQGYSFK
Sbjct: 635 QEAQRLGRVLRAK-----KGM-VAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 688

Query: 549 VLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
V+T + + +L++ K +Q LL KVL A
Sbjct: 689 VITKLAGMEE-EDLAFSTKEEQQQLLQKVLAA 719


tr_hit_id A9T7C2
Definition tr|A9T7C2|A9T7C2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 215
Score (bit) 377.0
E-value 1.0e-103
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951652|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_P15, 5'
(647 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T7C2|A9T7C2_PHYPA Predicted protein OS=Physcomitrella paten... 377 e-103
tr|B8LKF2|B8LKF2_PICSI Putative uncharacterized protein OS=Picea... 362 1e-98
tr|B8A801|B8A801_ORYSI Putative uncharacterized protein OS=Oryza... 341 3e-92
tr|A2ZWS0|A2ZWS0_ORYSJ Putative uncharacterized protein OS=Oryza... 340 6e-92
tr|A7QNL0|A7QNL0_VITVI Chromosome chr2 scaffold_132, whole genom... 330 6e-89
tr|A4RUU9|A4RUU9_OSTLU Predicted protein OS=Ostreococcus lucimar... 289 1e-76
tr|Q01C90|Q01C90_OSTTA DNA repair and transcription factor XPB1 ... 288 3e-76
tr|O00835|O00835_DICDI RepB (Transcription factor IIH subunit) O... 264 3e-69
tr|A7RXK7|A7RXK7_NEMVE Predicted protein (Fragment) OS=Nematoste... 261 3e-68
tr|A3LQY8|A3LQY8_PICST DNA helicase OS=Pichia stipitis GN=SSL2 P... 259 1e-67
tr|B3DLX4|B3DLX4_XENTR LOC100170563 protein OS=Xenopus tropicali... 258 2e-67
tr|Q5A1Y8|Q5A1Y8_CANAL Putative uncharacterized protein SSL2 OS=... 257 4e-67
tr|Q6CNF2|Q6CNF2_KLULA KLLA0E13025p OS=Kluyveromyces lactis GN=K... 256 6e-67
tr|Q6BQ13|Q6BQ13_DEBHA DEHA2E09174p OS=Debaryomyces hansenii GN=... 256 6e-67
tr|A8NU05|A8NU05_COPC7 Putative uncharacterized protein OS=Copri... 256 1e-66
tr|Q3U3I5|Q3U3I5_MOUSE Putative uncharacterized protein OS=Mus m... 255 2e-66
tr|Q753N2|Q753N2_ASHGO AFR280Wp OS=Ashbya gossypii GN=AFR280W PE... 255 2e-66
tr|A5DRY2|A5DRY2_LODEL DNA repair helicase RAD25 OS=Lodderomyces... 255 2e-66
tr|A7TIT3|A7TIT3_VANPO Putative uncharacterized protein OS=Vande... 254 3e-66
tr|A5DQ99|A5DQ99_PICGU Putative uncharacterized protein OS=Pichi... 254 3e-66
tr|Q3TVD8|Q3TVD8_MOUSE Putative uncharacterized protein (Fragmen... 254 4e-66
tr|A0MQ57|A0MQ57_CRIGR DNA helicase OS=Cricetulus griseus GN=ERC... 254 4e-66
tr|P91579|P91579_CIOIN COS41.1 OS=Ciona intestinalis PE=4 SV=1 254 4e-66
tr|B5VKG6|B5VKG6_YEAS6 YIL143Cp-like protein (Fragment) OS=Sacch... 253 5e-66
tr|B3LTZ0|B3LTZ0_YEAS1 DNA repair helicase RAD25 OS=Saccharomyce... 253 5e-66
tr|A6ZVD3|A6ZVD3_YEAS7 DNA helicase OS=Saccharomyces cerevisiae ... 253 5e-66
tr|A1L2X9|A1L2X9_XENLA LOC100036984 protein (Fragment) OS=Xenopu... 253 9e-66
tr|Q4R9E8|Q4R9E8_MACFA Testis cDNA clone: QtsA-10143, similar to... 253 9e-66
tr|Q53QM0|Q53QM0_HUMAN Putative uncharacterized protein ERCC3 (E... 253 9e-66
tr|B3KTH1|B3KTH1_HUMAN cDNA FLJ38238 fis, clone FCBBF2005733, hi... 253 9e-66

>tr|A9T7C2|A9T7C2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_168477 PE=4 SV=1
Length = 734

Score = 377 bits (969), Expect = e-103
Identities = 185/215 (86%), Positives = 203/215 (94%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
TKEF+ EY+KK+N+R++QGLYVMNPNKFRACEFL+RFHE+QRGDKIIVFSDNLFALREYA
Sbjct: 449 TKEFYREYLKKENSRKKQGLYVMNPNKFRACEFLIRFHEEQRGDKIIVFSDNLFALREYA 508

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
TKLRKP IYG TSH ERT IL AFKH+PQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 509 TKLRKPFIYGPTSHHERTRILYAFKHSPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 568

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAKGK KDR GG EEFNAFFYSLVSTDTQEMY+STKRQQFLIDQGYS
Sbjct: 569 RRQEAQRLGRILRAKGKHKDRMAGGTEEFNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 628

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNAG 647
FKV+TS+PPAD+GPELSY + +DQ++LLTKVL+AG
Sbjct: 629 FKVITSLPPADSGPELSYHSLDDQMNLLTKVLHAG 663


>tr|B8LKF2|B8LKF2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 772

Score = 362 bits (928), Expect = 1e-98
Identities = 178/215 (82%), Positives = 195/215 (90%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
T+EFFAEY+KK+N++++Q LYVMNPNKFRACEFL+RFHEQQRGDKIIVF+DNLFAL EYA
Sbjct: 484 TREFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 543

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
KLRKP IYGATSH ERT IL AFKH+P VNTVFLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 544 MKLRKPMIYGATSHSERTRILYAFKHSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 603

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAKGK +DR GG EE+NAFFYSLVS DTQEMY+STKRQQFLIDQGYS
Sbjct: 604 RRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSNDTQEMYYSTKRQQFLIDQGYS 663

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNAG 647
FKV+TS+PP DTG +L+Y DQL LLTKVLNAG
Sbjct: 664 FKVITSLPPPDTGADLNYHTLEDQLALLTKVLNAG 698


>tr|B8A801|B8A801_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03346 PE=4 SV=1
Length = 766

Score = 341 bits (874), Expect = 3e-92
Identities = 167/214 (78%), Positives = 190/214 (88%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
TKEFFAEY+KK+N++++Q LY MNPNKFRACEFL+RFHEQQRGDKIIVF+DNLFAL YA
Sbjct: 482 TKEFFAEYLKKENSKKKQVLYAMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTSYA 541

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
KLRKP IYG+TSH ERT IL+ FK++ VNT+FLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 542 MKLRKPMIYGSTSHVERTRILHQFKNSSDVNTIFLSKVGDNSIDIPEANVIIQISSHAGS 601

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAKGK +DR GG EE+NAFFYSLVSTDTQEMY+STKRQQFLIDQGYS
Sbjct: 602 RRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 661

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
FKV+TS+PP + P L Y+ NDQL+LL + L+A
Sbjct: 662 FKVITSLPPPEELPNLKYYTLNDQLELLAQSLSA 695


>tr|A2ZWS0|A2ZWS0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_002992 PE=4 SV=1
Length = 795

Score = 340 bits (871), Expect = 6e-92
Identities = 166/211 (78%), Positives = 188/211 (89%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
TKEFFAEY+KK+N++++Q LY MNPNKFRACEFL+RFHEQQRGDKIIVF+DNLFAL YA
Sbjct: 491 TKEFFAEYLKKENSKKKQVLYAMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTSYA 550

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
KLRKP IYG+TSH ERT IL+ FK++ VNT+FLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 551 MKLRKPMIYGSTSHVERTRILHQFKNSSDVNTIFLSKVGDNSIDIPEANVIIQISSHAGS 610

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAKGK +DR GG EE+NAFFYSLVSTDTQEMY+STKRQQFLIDQGYS
Sbjct: 611 RRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 670

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKV 635
FKV+TS+PP + P L Y+ NDQL+LL +V
Sbjct: 671 FKVITSLPPPEELPNLKYYTLNDQLELLAQV 701


>tr|A7QNL0|A7QNL0_VITVI Chromosome chr2 scaffold_132, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002569001
PE=4 SV=1
Length = 779

Score = 330 bits (845), Expect = 6e-89
Identities = 167/215 (77%), Positives = 187/215 (86%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
TKEFFAEY+KK+N++++Q LYVMNPNKFRACEFL+RFHEQQRGDKIIVF+DNLFAL EYA
Sbjct: 499 TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 558

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
KLRKP IYGATSH ERT IL AFK + VNT+FLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 559 MKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGS 618

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAK EE+NAFFYSLVSTDTQEMY+STKRQQFLIDQGYS
Sbjct: 619 RRQEAQRLGRILRAK--------VCKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 670

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNAG 647
FK++TS+PP D+G +LSY ++QL LL KVL+AG
Sbjct: 671 FKIITSLPPPDSGADLSYHRLDEQLALLGKVLSAG 705


>tr|A4RUU9|A4RUU9_OSTLU Predicted protein OS=Ostreococcus lucimarinus
(strain CCE9901) GN=OSTLU_34480 PE=4 SV=1
Length = 781

Score = 289 bits (739), Expect = 1e-76
Identities = 145/215 (67%), Positives = 170/215 (79%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
T EFF +Y + ++Q LY MNPNKF AC+FL++FHEQQR DK+IVFSDN+FALREYA
Sbjct: 477 TAEFFRKYCDPNFNNKKQVLYCMNPNKFMACQFLMQFHEQQRKDKVIVFSDNIFALREYA 536

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
T LR+P IYG TSH ERT +L+AFK++ ++NT+FLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 537 TALRRPLIYGDTSHAERTRVLHAFKYSNEINTIFLSKVGDNSIDIPEANVIIQISSHAGS 596

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILR K A+E NAFFYSLVSTDT EMY+STKRQQFLI QGY+
Sbjct: 597 RRQEAQRLGRILRPKAAQLSGKKTNADEHNAFFYSLVSTDTAEMYYSTKRQQFLIQQGYA 656

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNAG 647
FKV+T + P+L Y + QLDLL KVL+AG
Sbjct: 657 FKVVTDLIGPQDKPQLMYSTQEKQLDLLAKVLSAG 691


>tr|Q01C90|Q01C90_OSTTA DNA repair and transcription factor XPB1 (ISS)
OS=Ostreococcus tauri GN=Ot03g04120 PE=4 SV=1
Length = 812

Score = 288 bits (736), Expect = 3e-76
Identities = 144/215 (66%), Positives = 170/215 (79%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
T EFF +Y + + ++Q LY MNPNKF AC+FL++FHEQQR DK+IVFSDN+FALREYA
Sbjct: 511 TAEFFRKYCDSNYSNKKQVLYCMNPNKFMACQFLMQFHEQQRKDKVIVFSDNIFALREYA 570

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
T LR+P IYG TSH ERT +L+AFK++ ++NT+FLSKVGDNSIDIPEANVIIQISSHAGS
Sbjct: 571 TALRRPLIYGDTSHAERTRVLHAFKYSNEINTIFLSKVGDNSIDIPEANVIIQISSHAGS 630

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILR K A+E NAFFYSLVSTDT EMY+STKRQQFLI QGY+
Sbjct: 631 RRQEAQRLGRILRPKAAQLSGKKTNADEHNAFFYSLVSTDTAEMYYSTKRQQFLIQQGYA 690

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNAG 647
FKV+T + +L Y + QLDLL KVL+AG
Sbjct: 691 FKVVTDLIGPQDKQQLMYSTQEKQLDLLAKVLSAG 725


>tr|O00835|O00835_DICDI RepB (Transcription factor IIH subunit)
OS=Dictyostelium discoideum GN=repB PE=4 SV=1
Length = 800

Score = 264 bits (675), Expect = 3e-69
Identities = 139/215 (64%), Positives = 165/215 (76%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
T EF+ EY+ D+ +++ LY MNPNKFRACE+L+RFHEQ RGDKIIVFSDN++AL++YA
Sbjct: 518 TAEFYKEYLINDSQGKKKLLYTMNPNKFRACEYLIRFHEQ-RGDKIIVFSDNVYALQKYA 576

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
L + IYG TS ER IL+ F+H+P V T+F+SKVGD SIDIPEA VIIQ+SSH GS
Sbjct: 577 KGLGRYFIYGPTSGHERMSILSKFQHDPTVRTIFISKVGDTSIDIPEATVIIQVSSHYGS 636

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILR KPK G +NAFFYSLVS DTQEMY+STKRQQFLIDQGYS
Sbjct: 637 RRQEAQRLGRILRP--KPKSDG-----LYNAFFYSLVSKDTQEMYYSTKRQQFLIDQGYS 689

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNAG 647
FKV++ +P D L Y +K DQLDLL +VL G
Sbjct: 690 FKVISELPGIDQEVNLKYSSKQDQLDLLAQVLGEG 724


>tr|A7RXK7|A7RXK7_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g96883 PE=4 SV=1
Length = 734

Score = 261 bits (666), Expect = 3e-68
Identities = 138/214 (64%), Positives = 170/214 (79%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
T EF++EY+ R+R+ LYVMNPNKFR+CEFL+R+HE+ R DK+IVFSDN+FALR YA
Sbjct: 470 TPEFYSEYLNI-KTRKRKLLYVMNPNKFRSCEFLIRYHER-RNDKVIVFSDNVFALRNYA 527

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
KL+KP IYG TS ER IL F+HNP VNT+F+SKVGDNS D+PEANV+IQISSH GS
Sbjct: 528 IKLQKPFIYGPTSQGERISILQNFQHNPLVNTIFISKVGDNSFDLPEANVLIQISSHGGS 587

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAK KD AEE+NAFFY+LVSTDT+EMY+S+KRQ+FL++QGYS
Sbjct: 588 RRQEAQRLGRILRAK---KDM---AAEEYNAFFYTLVSTDTEEMYYSSKRQRFLVNQGYS 641

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVLNA 644
FKV+T + + L+ +K +Q +LL KVL A
Sbjct: 642 FKVITRLAGMEE-ENLNLSSKKEQHELLQKVLAA 674


>tr|A3LQY8|A3LQY8_PICST DNA helicase OS=Pichia stipitis GN=SSL2 PE=4
SV=2
Length = 838

Score = 259 bits (661), Expect = 1e-67
Identities = 132/212 (62%), Positives = 167/212 (78%)
Frame = +3

Query: 3 TKEFFAEYVKKDNARRRQGLYVMNPNKFRACEFLLRFHEQQRGDKIIVFSDNLFALREYA 182
T EF+ EY+K ++AR+R LY+MNP KF+AC+FL+ +HE+ RGDKIIVFSDN++AL+EYA
Sbjct: 556 TSEFYQEYLK-ESARKRMLLYIMNPTKFQACQFLIHYHEK-RGDKIIVFSDNVYALQEYA 613

Query: 183 TKLRKPCIYGATSHQERTHILNAFKHNPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 362
KL KP IYG+T QER IL+ F+HN Q+NT+FLSKVGD SID+PEA +IQISSH GS
Sbjct: 614 LKLGKPFIYGSTPQQERMQILSNFQHNDQINTIFLSKVGDTSIDLPEATCLIQISSHYGS 673

Query: 363 RRQEAQRLGRILRAKGKPKDRGPGGAEEFNAFFYSLVSTDTQEMYFSTKRQQFLIDQGYS 542
RRQEAQRLGRILRAK + E FNAFFYSLVS DTQEMY+STKRQ FL+DQGY+
Sbjct: 674 RRQEAQRLGRILRAKRR-------NDEGFNAFFYSLVSKDTQEMYYSTKRQAFLVDQGYA 726

Query: 543 FKVLTSIPPADTGPELSYFNKNDQLDLLTKVL 638
FKV+T + + P+L+Y + ++ +LL +VL
Sbjct: 727 FKVITHLSGMEQLPDLAYSSPRERRELLQQVL 758