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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951559
Clone id TST38A01NGRL0011_L17
Library
Length 669
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_L17. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CTGGAGGGATGAACGGTCTAGCTGCCTTGGACAGTAGCTGGGCTGAGCAGCGCAGGCTAG
AAGCTTTGAAGTTGTATTACAGAGTCCTTGGGTGTATGTGTCAAGCTGAGGCACAGAGGC
TGCATTGCGAGAATCTTTCTGCACTTCTTGTCAACGAGAGATTTCACCGGTGCATGCTCG
CATGCTCTGCAGAGTTAGTCTTAGCAACATACAAAACAGTGTCGTTGAATTTTCCTGCTG
TGCTTGAGCCCACGGGTATCACAGCATTTGATGCTTGGAAAGTAATAGAGAGCTTTGTAA
GACACGAAGAAACATTGCCAAGAGAGCTGAAACGGCATTTGAATTCAATTGAAGAGAAGA
TTTTGGAAAAGCTGGCTTGGGAAAAAGGTTCTTCCTTCTACAATTCGTTGATAATAGCAA
AACCAAACCTGCAGGGCGAGATCTATAGGTTGAATCTCCTTGCGGAACCCATGCCTTCCC
TGGAGGCCCTGCATTCTCGATATCAATTACTAGATGGAGGTTTTCAAGGTGATAAGCAGG
GGCTGTTGTATTCCCCAATGAAATTTTTGACCTCCACAGGATCATTGTCAGGTACACCTG
GGTGTTTAGAAAAGGTTGGCTGTGACTTTCTTTCACCTGTCAAGGACCGACAATCTGCAT
CCTTTTCTA
■■Homology search results ■■ -
sp_hit_id Q9LKZ3
Definition sp|Q9LKZ3|RBR1_ARATH Retinoblastoma-related protein 1 OS=Arabidopsis thaliana
Align length 226
Score (bit) 242.0
E-value 1.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951559|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_L17, 5'
         (669 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LKZ3|RBR1_ARATH Retinoblastoma-related protein 1 OS=Arabido...   242   1e-63
sp|Q3LXA7|RBR3_MAIZE Retinoblastoma-related protein 3 OS=Zea may...   236   1e-61
sp|Q84QM3|RBR1_ORYSJ Retinoblastoma-related protein 1 OS=Oryza s...   235   2e-61
sp|A2YXJ7|RBR1_ORYSI Retinoblastoma-related protein 1 OS=Oryza s...   235   2e-61
sp|Q9LKX9|RBR1_MAIZE Retinoblastoma-related protein 1 OS=Zea may...   226   8e-59
sp|Q2R374|RBR2_ORYSJ Retinoblastoma-related protein 2 OS=Oryza s...   224   2e-58
sp|Q8H0J6|RBR2_MAIZE Retinoblastoma-related protein 2 OS=Zea may...   217   4e-56
sp|P33568|RB_RAT Retinoblastoma-associated protein (Fragment) OS...    96   1e-19
sp|P13405|RB_MOUSE Retinoblastoma-associated protein OS=Mus musc...    96   1e-19
sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo sap...    96   2e-19
sp|Q90600|RB_CHICK Retinoblastoma-associated protein OS=Gallus g...    96   2e-19
sp|P28749|RBL1_HUMAN Retinoblastoma-like protein 1 OS=Homo sapie...    94   7e-19
sp|Q64701|RBL1_MOUSE Retinoblastoma-like protein 1 OS=Mus muscul...    92   2e-18
sp|Q08999|RBL2_HUMAN Retinoblastoma-like protein 2 OS=Homo sapie...    89   2e-17
sp|O55081|RBL2_RAT Retinoblastoma-like protein 2 OS=Rattus norve...    87   8e-17
sp|Q64700|RBL2_MOUSE Retinoblastoma-like protein 2 OS=Mus muscul...    87   1e-16
sp|Q24472|RBF_DROME Retinoblastoma family protein OS=Drosophila ...    79   2e-14
sp|P40563|YIS3_YEAST Uncharacterized protein YIR003W OS=Saccharo...    35   0.28 
sp|Q5ZHQ6|ACBD5_CHICK Acyl-CoA-binding domain-containing protein...    33   1.8  
sp|Q7M7M4|TIG_WOLSU Trigger factor OS=Wolinella succinogenes GN=...    32   2.3  
sp|Q82UQ0|NRDR_NITEU Transcriptional repressor nrdR OS=Nitrosomo...    32   4.0  
sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1...    31   5.2  
sp|O06506|VATD_DESSY V-type ATP synthase subunit D OS=Desulfuroc...    31   5.2  
sp|Q6G0J2|LLDD_BARQU L-lactate dehydrogenase [cytochrome] OS=Bar...    31   5.2  
sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=...    31   6.8  
sp|O66503|RIR1_AQUAE Ribonucleoside-diphosphate reductase subuni...    31   6.8  
sp|P49260|PLA2R_RABIT Secretory phospholipase A2 receptor OS=Ory...    31   6.8  
sp|Q04629|SWF1_YEAST Palmitoyltransferase SWF1 OS=Saccharomyces ...    30   8.9  
sp|Q13018|PLA2R_HUMAN Secretory phospholipase A2 receptor OS=Hom...    30   8.9  
sp|Q5RDL6|EID1_PONAB EP300-interacting inhibitor of differentiat...    30   8.9  

>sp|Q9LKZ3|RBR1_ARATH Retinoblastoma-related protein 1 OS=Arabidopsis
            thaliana GN=RBR1 PE=1 SV=1
          Length = 1013

 Score =  242 bits (617), Expect = 1e-63
 Identities = 129/226 (57%), Positives = 160/226 (70%), Gaps = 10/226 (4%)
 Frame = +3

Query: 3    GGMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLA 182
            G +  +  +D  WAEQRRLEA KLYYRVL  MC+AEAQ LH  NL++LL NERFHRCMLA
Sbjct: 472  GSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 531

Query: 183  CSAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKI 362
            CSAELVLAT+KT+++ FPAVLE TGITAFD  KVIESF+RHE++LPREL+RHLNS+EE++
Sbjct: 532  CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERL 591

Query: 363  LEKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGGFQGD--- 533
            LE + WEKGSS YNSLI+A+P+L  EI +L LLAEPMPSL+A+ +     DG        
Sbjct: 592  LESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPMPSLDAIAALINFSDGANHASSVQ 651

Query: 534  -------KQGLLYSPMKFLTSTGSLSGTPGCLEKVGCDFLSPVKDR 650
                   + G + SP +  T   S+      +E+    F SPVKDR
Sbjct: 652  KHETCPGQNGGIRSPKRLCTDYRSI-----LVER--NSFTSPVKDR 690


>sp|Q3LXA7|RBR3_MAIZE Retinoblastoma-related protein 3 OS=Zea mays
           GN=RBR3 PE=2 SV=1
          Length = 1010

 Score =  236 bits (601), Expect = 1e-61
 Identities = 116/171 (67%), Positives = 141/171 (82%)
 Frame = +3

Query: 9   MNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACS 188
           M   + +D+ W EQR++EALKLYYRVL  MC+AE+Q L   NL++LL NERFHRCM+ACS
Sbjct: 483 MRSASRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHRCMIACS 542

Query: 189 AELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILE 368
           AELVLAT+KTV++ FPAVLE TGITAFD  KVIE FVRHE+TLPRELKRHLNS+EE++LE
Sbjct: 543 AELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLE 602

Query: 369 KLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGG 521
            +AWEKGSS YNSLI+A+P L  EI RL LLAEPMPSL+A+ + + +  GG
Sbjct: 603 SMAWEKGSSMYNSLIVARPALSVEISRLGLLAEPMPSLDAIAAHHNISLGG 653


>sp|Q84QM3|RBR1_ORYSJ Retinoblastoma-related protein 1 OS=Oryza
           sativa subsp. japonica GN=RBR1 PE=2 SV=1
          Length = 1010

 Score =  235 bits (599), Expect = 2e-61
 Identities = 114/161 (70%), Positives = 137/161 (85%)
 Frame = +3

Query: 27  LDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLA 206
           +D+ W EQR++EALKLYYRVL  MC+AE Q L   NL++LL NERFHRCM+ACSAELVLA
Sbjct: 492 IDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELVLA 551

Query: 207 TYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAWEK 386
           T+KTV++ FPAVLE TGITAFD  KVIESFVRHE+TLPRELKRHLNS+EE++LE +AWEK
Sbjct: 552 THKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAWEK 611

Query: 387 GSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQL 509
           GSS YNSLI+A+P L  EI RL LLAEPMPSL+A+ + + +
Sbjct: 612 GSSMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAAHHNI 652


>sp|A2YXJ7|RBR1_ORYSI Retinoblastoma-related protein 1 OS=Oryza
           sativa subsp. indica GN=RBR1 PE=3 SV=1
          Length = 1010

 Score =  235 bits (599), Expect = 2e-61
 Identities = 114/161 (70%), Positives = 137/161 (85%)
 Frame = +3

Query: 27  LDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLA 206
           +D+ W EQR++EALKLYYRVL  MC+AE Q L   NL++LL NERFHRCM+ACSAELVLA
Sbjct: 492 IDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELVLA 551

Query: 207 TYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAWEK 386
           T+KTV++ FPAVLE TGITAFD  KVIESFVRHE+TLPRELKRHLNS+EE++LE +AWEK
Sbjct: 552 THKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAWEK 611

Query: 387 GSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQL 509
           GSS YNSLI+A+P L  EI RL LLAEPMPSL+A+ + + +
Sbjct: 612 GSSMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAAHHNI 652


>sp|Q9LKX9|RBR1_MAIZE Retinoblastoma-related protein 1 OS=Zea mays
           GN=RBR1 PE=1 SV=2
          Length = 867

 Score =  226 bits (576), Expect = 8e-59
 Identities = 111/165 (67%), Positives = 135/165 (81%)
 Frame = +3

Query: 6   GMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLAC 185
           G+N   A D  WAE R++EA KLYYRVL  +C+AE Q  +  NL+ LL NERFHRC++AC
Sbjct: 342 GLNCANAFDIPWAEARKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIAC 401

Query: 186 SAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKIL 365
           SA+LVLAT+KTV + FPAVLE TG+TAFD  K+IE+FVRHEETLPRELKRHLNS+EE++L
Sbjct: 402 SADLVLATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLL 461

Query: 366 EKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSR 500
           E +AWEKGSS YNSLI+A+P++  EI RL LLAEPMPSL+ L SR
Sbjct: 462 ESMAWEKGSSLYNSLIVARPSVASEINRLGLLAEPMPSLDDLVSR 506


>sp|Q2R374|RBR2_ORYSJ Retinoblastoma-related protein 2 OS=Oryza
           sativa subsp. japonica GN=RBR2 PE=2 SV=2
          Length = 978

 Score =  224 bits (572), Expect = 2e-58
 Identities = 109/172 (63%), Positives = 137/172 (79%)
 Frame = +3

Query: 6   GMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLAC 185
           G+N   A D  WAE R++EA KLYYRVL  +C+AE+Q  +  NL+ LL NERFHRC++AC
Sbjct: 451 GLNCANAFDIPWAEARKMEASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIAC 510

Query: 186 SAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKIL 365
           SAELVLAT+KTV + FPAVLE TG+TAFD  K+IE+FVRHEETLPRELKRHLNS+EE++L
Sbjct: 511 SAELVLATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLL 570

Query: 366 EKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGG 521
           E ++WEKGSS YNSL++A+P+L  EI  L LLAEPMPSL+ + +R  +   G
Sbjct: 571 ESMSWEKGSSLYNSLVVARPSLSTEINSLGLLAEPMPSLDGIVARQSIHPDG 622


>sp|Q8H0J6|RBR2_MAIZE Retinoblastoma-related protein 2 OS=Zea mays
           GN=RBR2 PE=2 SV=1
          Length = 866

 Score =  217 bits (553), Expect = 4e-56
 Identities = 105/168 (62%), Positives = 134/168 (79%)
 Frame = +3

Query: 6   GMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLAC 185
           G+N   A D+ WA+ R++EA KLYYRVL  +C+AE Q  +  NL+ LL NERFHRC++AC
Sbjct: 341 GLNCANAFDTLWADARKMEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIAC 400

Query: 186 SAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKIL 365
           SA++VLAT+KTV + FPAVLE  G+T+FD  K+IE+FVRHEETLPRELKRHLNS+EE+IL
Sbjct: 401 SADVVLATHKTVIMMFPAVLESAGLTSFDLSKIIENFVRHEETLPRELKRHLNSLEEQIL 460

Query: 366 EKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQL 509
           E +AWEKGSS YNSLI+A+P++  EI R  LLAE MPSL+ L +R  +
Sbjct: 461 ESMAWEKGSSLYNSLIVARPSVASEINRFGLLAESMPSLDDLVARQNI 508


>sp|P33568|RB_RAT Retinoblastoma-associated protein (Fragment)
           OS=Rattus norvegicus GN=Rb1 PE=1 SV=2
          Length = 899

 Score = 96.3 bits (238), Expect = 1e-19
 Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
 Frame = +3

Query: 48  QRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLATYKT--- 218
           QR    ++LYYRV+  M ++E +RL  +N S LL +  FH  +LAC+ E+V+ATY     
Sbjct: 416 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSML 475

Query: 219 ------VSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAW 380
                   L+FP +L    + AFD +KVIESF++ E  L RE+ +HL   E +I+E LAW
Sbjct: 476 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAW 535

Query: 381 EKGSSFYNSLIIAKPNLQGE 440
              S  ++   + K +  GE
Sbjct: 536 LSDSPLFD---LIKQSKDGE 552


>sp|P13405|RB_MOUSE Retinoblastoma-associated protein OS=Mus
           musculus GN=Rb1 PE=1 SV=1
          Length = 921

 Score = 96.3 bits (238), Expect = 1e-19
 Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
 Frame = +3

Query: 48  QRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLATYKT--- 218
           QR    ++LYYRV+  M ++E +RL  +N S LL +  FH  +LAC+ E+V+ATY     
Sbjct: 438 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTL 497

Query: 219 ------VSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAW 380
                   L+FP +L    + AFD +KVIESF++ E  L RE+ +HL   E +I+E LAW
Sbjct: 498 QHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAW 557

Query: 381 EKGSSFYNSLIIAKPNLQGE 440
              S  ++   + K +  GE
Sbjct: 558 LSDSPLFD---LIKQSKDGE 574


>sp|P06400|RB_HUMAN Retinoblastoma-associated protein OS=Homo
           sapiens GN=RB1 PE=1 SV=2
          Length = 928

 Score = 95.9 bits (237), Expect = 2e-19
 Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
 Frame = +3

Query: 48  QRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLATYKT--- 218
           QR    ++LYYRV+  M ++E +RL  +N S LL +  FH  +LAC+ E+V+ATY     
Sbjct: 444 QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTS 503

Query: 219 ------VSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAW 380
                   L+FP +L    + AFD +KVIESF++ E  L RE+ +HL   E +I+E LAW
Sbjct: 504 QNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 563

Query: 381 EKGSSFYN 404
              S  ++
Sbjct: 564 LSDSPLFD 571
tr_hit_id A9SVH7
Definition tr|A9SVH7|A9SVH7_PHYPA Rb-related protein OS=Physcomitrella patens subsp. patens
Align length 229
Score (bit) 254.0
E-value 4.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951559|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_L17, 5'
         (669 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SVH7|A9SVH7_PHYPA Rb-related protein OS=Physcomitrella pate...   254   4e-66
tr|B1ABS0|B1ABS0_9ASTR Retinoblastoma-related protein OS=Hieraci...   242   1e-62
tr|B1ABR6|B1ABR6_HIEPI Retinoblastoma-related protein OS=Hieraci...   241   2e-62
tr|A9SLF5|A9SLF5_PHYPA Rb-related protein (Fragment) OS=Physcomi...   241   3e-62
tr|Q8H252|Q8H252_COCNU Retinoblastoma-like protein OS=Cocos nuci...   238   3e-61
tr|A9UL13|A9UL13_WHEAT Retinoblastoma-related protein 1 OS=Triti...   238   3e-61
tr|A7P514|A7P514_VITVI Chromosome chr4 scaffold_6, whole genome ...   236   7e-61
tr|Q9M7J0|Q9M7J0_9ROSI Retinoblastoma-related protein 1 OS=Popul...   236   1e-60
tr|Q9M5G5|Q9M5G5_EUPES Retinoblastoma-like protein (Fragment) OS...   236   1e-60
tr|Q66WV0|Q66WV0_NICBE Retinoblastoma protein OS=Nicotiana benth...   236   1e-60
tr|O82677|O82677_CHERU Retinoblastoma-related protein OS=Chenopo...   236   1e-60
tr|B7F8C8|B7F8C8_ORYSJ cDNA, clone: J065014C16, full insert sequ...   235   2e-60
tr|Q4JF75|Q4JF75_SCUBA Retinoblastoma OS=Scutellaria baicalensis...   233   6e-60
tr|Q9SXN6|Q9SXN6_TOBAC NtRb1 protein OS=Nicotiana tabacum GN=NtR...   232   1e-59
tr|A9UL14|A9UL14_MEDSA Retinoblastoma-related protein OS=Medicag...   229   1e-58
tr|Q9SLZ4|Q9SLZ4_PEA Retinoblastoma-related protein OS=Pisum sat...   225   2e-57
tr|Q8GU40|Q8GU40_PHYPA Putative retinoblastoma protein OS=Physco...   225   2e-57
tr|Q2ABE5|Q2ABE5_CAMSI Retinoblastoma related protein OS=Camelli...   224   3e-57
tr|B8BKW0|B8BKW0_ORYSI Putative uncharacterized protein OS=Oryza...   224   3e-57
tr|B7EAB3|B7EAB3_ORYSJ cDNA clone:J013001D03, full insert sequen...   224   3e-57
tr|Q41763|Q41763_MAIZE Retinoblastoma-like protein (Fragment) OS...   217   6e-55
tr|A7PA54|A7PA54_VITVI Chromosome chr14 scaffold_9, whole genome...   204   5e-51
tr|A1YQY5|A1YQY5_VOLCA Retinoblastoma-related protein OS=Volvox ...   114   7e-24
tr|A8HY72|A8HY72_CHLRE Retinoblastoma protein OS=Chlamydomonas r...   107   9e-22
tr|Q94FG7|Q94FG7_CHLRE Mating type protein Mat3p OS=Chlamydomona...   106   1e-21
tr|Q5SCB2|Q5SCB2_OSTTA Retinoblastoma protein OS=Ostreococcus ta...   106   1e-21
tr|Q00U21|Q00U21_OSTTA Retinoblastoma protein (IC) OS=Ostreococc...   106   1e-21
tr|Q98966|Q98966_NOTVI Retinoblastoma protein OS=Notophthalmus v...   104   6e-21
tr|Q5J3Q9|Q5J3Q9_FUNHE Retinoblastoma tumor suppressor OS=Fundul...   100   8e-20
tr|A3DUJ4|A3DUJ4_XIPMA Retinoblastoma susceptibility protein OS=...    99   3e-19

>tr|A9SVH7|A9SVH7_PHYPA Rb-related protein OS=Physcomitrella patens
            subsp. patens GN=RBL1501 PE=4 SV=1
          Length = 1116

 Score =  254 bits (648), Expect = 4e-66
 Identities = 137/229 (59%), Positives = 164/229 (71%), Gaps = 10/229 (4%)
 Frame = +3

Query: 3    GGMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLA 182
            GG  G+A L   W EQR+LEA+KLYY+VLG MC++E QRLH  NL++LL NERFHRCM+A
Sbjct: 600  GGWQGVAGLMDVWPEQRKLEAIKLYYKVLGAMCRSEEQRLHTHNLTSLLSNERFHRCMIA 659

Query: 183  CSAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKI 362
            CSAELVLAT+KTV++ FPAVLEP GITAFD  KVIE FVRHEETLPRELKRHLN+IEE+I
Sbjct: 660  CSAELVLATHKTVTMGFPAVLEPAGITAFDLSKVIEYFVRHEETLPRELKRHLNTIEERI 719

Query: 363  LEKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQ----------LL 512
            LE +AWEKGSS YNSLI+A+P+L  EI RL LLA+PMP+LE L ++ +          L 
Sbjct: 720  LESMAWEKGSSMYNSLIVARPSLANEINRLCLLADPMPALENLATQVRPATVMHRIPGLS 779

Query: 513  DGGFQGDKQGLLYSPMKFLTSTGSLSGTPGCLEKVGCDFLSPVKDRQSA 659
              G  G+     ++P    TS  S         + G  FLSPVKDR SA
Sbjct: 780  KSGHSGEVACAAHTP----TSASSPPQNGSSTSEAG--FLSPVKDRPSA 822


>tr|B1ABS0|B1ABS0_9ASTR Retinoblastoma-related protein OS=Hieracium
            pilosella GN=RBR PE=2 SV=1
          Length = 1008

 Score =  242 bits (618), Expect = 1e-62
 Identities = 131/216 (60%), Positives = 157/216 (72%), Gaps = 8/216 (3%)
 Frame = +3

Query: 27   LDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLA 206
            +D+ WAEQRRLEALKLYYRVL  MC+AE+Q LH  NL++LL NERFHRCMLACSAELVLA
Sbjct: 478  MDNIWAEQRRLEALKLYYRVLHAMCKAESQILHGNNLTSLLTNERFHRCMLACSAELVLA 537

Query: 207  TYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAWEK 386
            T+KTV++ FPAVLE TGITAFD  KVIESF+RHEE LPREL+RHLNS+EE++LE + WEK
Sbjct: 538  THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEEPLPRELRRHLNSLEERLLESMVWEK 597

Query: 387  GSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGGF--------QGDKQG 542
            GSS YNSL IA+PNL  EI RL LLA+PMPSL+A+  +  +  GG            K G
Sbjct: 598  GSSMYNSLTIARPNLSNEINRLGLLADPMPSLDAIALQCNMSCGGLPPVPKRDTSPGKSG 657

Query: 543  LLYSPMKFLTSTGSLSGTPGCLEKVGCDFLSPVKDR 650
             + SP +      S+      +E+    F SPVKDR
Sbjct: 658  EIRSPKRVCNEYRSV-----LVER--NSFTSPVKDR 686


>tr|B1ABR6|B1ABR6_HIEPI Retinoblastoma-related protein OS=Hieracium
            piloselloides GN=RBR PE=2 SV=1
          Length = 1005

 Score =  241 bits (616), Expect = 2e-62
 Identities = 131/216 (60%), Positives = 157/216 (72%), Gaps = 8/216 (3%)
 Frame = +3

Query: 27   LDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLA 206
            +D+ WAEQRRLEALKLYYRVL  MC+AE+Q LH  NL++LL NERFHRCMLACSAELVLA
Sbjct: 478  MDNIWAEQRRLEALKLYYRVLHAMCKAESQILHGNNLTSLLTNERFHRCMLACSAELVLA 537

Query: 207  TYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAWEK 386
            T+KTV++ FPAVLE TGITAFD  KVIESF+RHEE+LPREL+RHLNS+EE++LE + WEK
Sbjct: 538  THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEK 597

Query: 387  GSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGGF--------QGDKQG 542
            GSS YNSL IA+PNL  EI RL LLA PMPSL+A+  +  +  GG            K G
Sbjct: 598  GSSMYNSLTIARPNLSNEINRLGLLAGPMPSLDAIALQCNMSCGGLPPVPKRDTSPGKSG 657

Query: 543  LLYSPMKFLTSTGSLSGTPGCLEKVGCDFLSPVKDR 650
             + SP +      S+      +E+    F SPVKDR
Sbjct: 658  EIRSPKRVCNEYRSV-----LVER--NSFTSPVKDR 686


>tr|A9SLF5|A9SLF5_PHYPA Rb-related protein (Fragment)
            OS=Physcomitrella patens subsp. patens GN=RBL1502 PE=4
            SV=1
          Length = 937

 Score =  241 bits (615), Expect = 3e-62
 Identities = 129/218 (59%), Positives = 158/218 (72%), Gaps = 7/218 (3%)
 Frame = +3

Query: 27   LDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLA 206
            +D+ WAEQR+LEA+KLYY+VLG MC++E QRLH +NLS+LL NERFHRCM+ACSAELVLA
Sbjct: 459  MDTIWAEQRKLEAVKLYYKVLGAMCRSEEQRLHTKNLSSLLSNERFHRCMIACSAELVLA 518

Query: 207  TYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAWEK 386
            T+KTV++ FPAVL+P GITAFD  KVIE FVRHE+TLPRELKRHLN+IEE+ILE +AW K
Sbjct: 519  THKTVTMGFPAVLDPAGITAFDLSKVIEYFVRHEDTLPRELKRHLNTIEERILESMAWGK 578

Query: 387  GSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGGF-------QGDKQGL 545
            GSS YNSLI+A+P+L  EI RL LLA+PMP+LE + S+ +L            + D  G 
Sbjct: 579  GSSMYNSLIVARPSLANEINRLCLLADPMPALENVGSQIRLSTDTVHRALVITKPDHAGA 638

Query: 546  LYSPMKFLTSTGSLSGTPGCLEKVGCDFLSPVKDRQSA 659
            +   +       S S T          FLSP KDR SA
Sbjct: 639  ITISLVLYLIGSSTSET---------GFLSPAKDRPSA 667


>tr|Q8H252|Q8H252_COCNU Retinoblastoma-like protein OS=Cocos
           nucifera GN=Rb1 PE=2 SV=1
          Length = 1011

 Score =  238 bits (607), Expect = 3e-61
 Identities = 117/173 (67%), Positives = 142/173 (82%)
 Frame = +3

Query: 3   GGMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLA 182
           G +  +  +DS WAEQR++EA+KLYYRVL  MC+AE+  L+  NL++LL N+RFHRCMLA
Sbjct: 477 GNLQSVNQMDSIWAEQRKVEAMKLYYRVLETMCRAESHILNGNNLTSLLSNDRFHRCMLA 536

Query: 183 CSAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKI 362
           CSAELVLAT+KTV++ FPAVLE TGITAFD  KVIESFVRHEETLPRELKRHLNS+EE++
Sbjct: 537 CSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEETLPRELKRHLNSLEERL 596

Query: 363 LEKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGG 521
           LE +AWE+GSS YNSLI+A+P L  EI RL LLAEPMPSL+A+     +  GG
Sbjct: 597 LESMAWERGSSMYNSLIVARPTLAAEINRLGLLAEPMPSLDAIAVHNNISTGG 649


>tr|A9UL13|A9UL13_WHEAT Retinoblastoma-related protein 1 OS=Triticum
            aestivum GN=Rbr1 PE=2 SV=1
          Length = 957

 Score =  238 bits (607), Expect = 3e-61
 Identities = 129/226 (57%), Positives = 160/226 (70%), Gaps = 7/226 (3%)
 Frame = +3

Query: 9    MNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACS 188
            +   + +D+ W EQR++EALKLYYRVL  MC+AE+Q L   NL++LL NERFHRCM+ACS
Sbjct: 436  LRNTSGMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGSNLTSLLSNERFHRCMIACS 495

Query: 189  AELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILE 368
            AELVLAT+KTV++ FPAVLE TGITAFD  KVIESFVRHE++LPRELKRHLNS+EE++LE
Sbjct: 496  AELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDSLPRELKRHLNSLEERLLE 555

Query: 369  KLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGGF-------Q 527
             +AWEKGSS YNSLI+A+P L  EI RL LLAEPMPSL+A+   + +  GG        Q
Sbjct: 556  SMAWEKGSSMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAVHHDISLGGLPPLPFHKQ 615

Query: 528  GDKQGLLYSPMKFLTSTGSLSGTPGCLEKVGCDFLSPVKDRQSASF 665
             DK   + SP +  T   ++         V   F SPVKD   + F
Sbjct: 616  PDKDE-VRSPKRACTERRNV--------LVDNSFRSPVKDAIKSKF 652


>tr|A7P514|A7P514_VITVI Chromosome chr4 scaffold_6, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00032361001
            PE=4 SV=1
          Length = 1007

 Score =  236 bits (603), Expect = 7e-61
 Identities = 129/221 (58%), Positives = 152/221 (68%), Gaps = 13/221 (5%)
 Frame = +3

Query: 27   LDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLACSAELVLA 206
            +DS WA+QRR+EA+KLYYRVL  MC AEAQ LH  NL++LL NERFHRCMLACSAELVLA
Sbjct: 477  MDSIWAQQRRMEAMKLYYRVLEAMCTAEAQVLHANNLTSLLTNERFHRCMLACSAELVLA 536

Query: 207  TYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKILEKLAWEK 386
            T+KTV++ FPAVLE TGITAFD  KVIESF+RHEE+LPREL+RHLNS+EE++LE + WEK
Sbjct: 537  THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEK 596

Query: 387  GSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGGFQGDKQGLLYSPMKF 566
            GSS YNSLI+A+  L  E+ RL LLAEPMPSL+A+        GG           P+  
Sbjct: 597  GSSMYNSLIVARAALSAEVNRLGLLAEPMPSLDAISMHINASCGGL---------PPVPS 647

Query: 567  LTSTGSLSGTPGCLE--KVGC-----------DFLSPVKDR 650
            L    S  G  G +   K  C            F SPVKDR
Sbjct: 648  LQKRESSPGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDR 688


>tr|Q9M7J0|Q9M7J0_9ROSI Retinoblastoma-related protein 1 OS=Populus
            tremula x Populus tremuloides GN=RB1 PE=2 SV=1
          Length = 1035

 Score =  236 bits (602), Expect = 1e-60
 Identities = 134/229 (58%), Positives = 155/229 (67%), Gaps = 13/229 (5%)
 Frame = +3

Query: 3    GGMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLA 182
            G +     +D+ WAEQRRLEALKLYYRVL  MC AEAQ LH  NL++LL NERFHRCMLA
Sbjct: 497  GSLQSTNLMDNIWAEQRRLEALKLYYRVLESMCTAEAQILHATNLTSLLTNERFHRCMLA 556

Query: 183  CSAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKI 362
            CSAELV+ATYKTV++ FPAVLE TGITAFD  KVIESF+RHEE+LPREL+RHLNS+EE++
Sbjct: 557  CSAELVVATYKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 616

Query: 363  LEKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGGFQGDKQG 542
            L+ + WEKGSS YNSL +A+  L  EI RL LLAEPMPSL+A+        G        
Sbjct: 617  LDSMVWEKGSSLYNSLTVARTALSAEINRLGLLAEPMPSLDAIAMHINFSSGCLPP---- 672

Query: 543  LLYSPMKFLTSTGSLSGTPGCLE--KVGC-----------DFLSPVKDR 650
             + S  K  TS G  SG  G L   K  C            F SPVKDR
Sbjct: 673  -VPSLQKHETSPG--SGQNGDLRSPKRPCTDFRSVLVERNSFTSPVKDR 718


>tr|Q9M5G5|Q9M5G5_EUPES Retinoblastoma-like protein (Fragment)
           OS=Euphorbia esula PE=2 SV=1
          Length = 801

 Score =  236 bits (602), Expect = 1e-60
 Identities = 116/172 (67%), Positives = 138/172 (80%)
 Frame = +3

Query: 3   GGMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLA 182
           GG+     +++ WAEQRRLEALKL YRVL  MC AEAQ LH  NL++LL NERFHRCML+
Sbjct: 263 GGLQNTNLMENIWAEQRRLEALKLSYRVLEAMCTAEAQVLHANNLTSLLTNERFHRCMLS 322

Query: 183 CSAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKI 362
           CSAELVLAT+KTV++ FPAVLE TGITAFD  KVIESF+RHEE+LPREL+RHLNS+EE++
Sbjct: 323 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 382

Query: 363 LEKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDG 518
           LE + WEKGSS YNSL +A+P+L  EI  L LLAEPMPSL+A+  R     G
Sbjct: 383 LESMVWEKGSSMYNSLTVARPSLSSEINHLGLLAEPMPSLDAIAVRINFSSG 434


>tr|Q66WV0|Q66WV0_NICBE Retinoblastoma protein OS=Nicotiana
            benthamiana PE=2 SV=1
          Length = 1003

 Score =  236 bits (601), Expect = 1e-60
 Identities = 129/228 (56%), Positives = 158/228 (69%), Gaps = 12/228 (5%)
 Frame = +3

Query: 3    GGMNGLAALDSSWAEQRRLEALKLYYRVLGCMCQAEAQRLHCENLSALLVNERFHRCMLA 182
            G +   + +D+ WAEQRR EALKLYYRVL  MC AE+Q L+  NL++LL NERFHRCMLA
Sbjct: 472  GSLQSTSLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLA 531

Query: 183  CSAELVLATYKTVSLNFPAVLEPTGITAFDAWKVIESFVRHEETLPRELKRHLNSIEEKI 362
            CSAELVLAT+KTV++ FPAVLE TGITAFD  KVIESF+RHEE+LPREL+RHLNS+EE++
Sbjct: 532  CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 591

Query: 363  LEKLAWEKGSSFYNSLIIAKPNLQGEIYRLNLLAEPMPSLEALHSRYQLLDGGF------ 524
            LE + WEKGSS YNSL +AKP+L  EI R+ LLAEPMPSL+A+     L  G        
Sbjct: 592  LESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSL 651

Query: 525  ------QGDKQGLLYSPMKFLTSTGSLSGTPGCLEKVGCDFLSPVKDR 650
                     + G + SP K  +   S+      +E+    F SPVKDR
Sbjct: 652  HKNNLAPNGQIGDIRSPKKVCSEYRSV-----LVER--NSFTSPVKDR 692