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NBDC - LSDB Archive
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DK950886
Clone id TST38A01NGRL0009_O10
Library
Length 650
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_O10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CTTTTGGAAAGGTTTAATTTTCTTGTGGTACTTAAAACATATTAACACTGTTCTAGCTCT
TGTTTCCACTGGCTCTTAATGATTTAGCACAAGGACTAAACTGCCATTTGCTTAATGTGT
TTCTGTTTCTGAAATTTAGATTAGATTTCTTGTTTTTTCTTGTCTAACCTTACTCAGAAT
TGGGCCCTTAGAAGTTAATCCATTAATGCAGAATCGGCCAAGAGGTCCACCAGGGGGTTA
CAACCAGCAAGGCTTCAGGCCACCTGGAGCCCCTCAGTGGGGTCAACCTCGTCCACCAAT
GCAACCTCAGGGCTATGGCTACCAACAAGGGTCCTATCCTGGACAAGGTCAAACTCAGTC
TCAGCCTTATGGAGGCTATGGGCAACCGCAGCCTGGTGGGCCACCTCAACAGTACCCACC
TCAATCTGGACCCTATGGTGGGTACAATCAGCAGCGCCCTCCTCCTCAACAGTTCTCTGG
TCAACCGCAACCATATGGATCTTCTCAAGAGTTTTCTGGACACTCTCAACAGTACGGAGG
GTTTGCACAGCGTGCTCCTGTACCGGCCCAACAGCAGCAGGCACCACAGGGATATTTTAA
CCCATCAAGTCAGCAGGGGGCAAGTCCTACTGAAAATAGCTCTGGCTATG
■■Homology search results ■■ -
sp_hit_id Q0IIJ3
Definition sp|Q0IIJ3|WASF1_BOVIN Wiskott-Aldrich syndrome protein family member 1 OS=Bos taurus
Align length 98
Score (bit) 35.0
E-value 0.34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950886|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_O10, 5'
         (650 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0IIJ3|WASF1_BOVIN Wiskott-Aldrich syndrome protein family me...    35   0.34 
sp|Q5BJU7|WASF1_RAT Wiskott-Aldrich syndrome protein family memb...    34   0.58 
sp|Q5NVG8|WASF1_PONAB Wiskott-Aldrich syndrome protein family me...    34   0.58 
sp|Q8R5H6|WASF1_MOUSE Wiskott-Aldrich syndrome protein family me...    34   0.58 
sp|Q92558|WASF1_HUMAN Wiskott-Aldrich syndrome protein family me...    34   0.58 
sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3     34   0.76 
sp|Q258K2|MYH9_CANFA Myosin-9 OS=Canis familiaris GN=MYH9 PE=2 SV=1    32   2.2  
sp|P38739|WSC4_YEAST Cell wall integrity and stress response com...    32   2.9  
sp|Q85FW0|RK2_CYAME 50S ribosomal protein L2, chloroplastic OS=C...    32   2.9  
sp|O15195|VILL_HUMAN Villin-like protein OS=Homo sapiens GN=VILL...    32   3.8  
sp|Q8KDT4|PUR7_CHLTE Phosphoribosylaminoimidazole-succinocarboxa...    32   3.8  
sp|Q61879|MYH10_MOUSE Myosin-10 OS=Mus musculus GN=Myh10 PE=1 SV=2     31   4.9  
sp|P47179|DAN4_YEAST Cell wall protein DAN4 OS=Saccharomyces cer...    31   4.9  
sp|P17012|ZFX_MOUSE Zinc finger X-chromosomal protein OS=Mus mus...    31   6.4  
sp|Q13UH9|SUCC_BURXL Succinyl-CoA ligase [ADP-forming] subunit b...    31   6.4  
sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN...    31   6.4  
sp|Q9Y2Y8|PRG3_HUMAN Proteoglycan 3 OS=Homo sapiens GN=PRG3 PE=1...    31   6.4  
sp|O94130|CREA_BOTFU DNA-binding protein creA OS=Botryotinia fuc...    31   6.4  

>sp|Q0IIJ3|WASF1_BOVIN Wiskott-Aldrich syndrome protein family
           member 1 OS=Bos taurus GN=WASF1 PE=2 SV=1
          Length = 559

 Score = 35.0 bits (79), Expect = 0.34
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
 Frame = -1

Query: 617 PADLMG*NIPVVPAA----VGPVQE--HAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEG 456
           P+   G ++P++P +    V P  E      TL  +   +  L +     +  R VEE+ 
Sbjct: 459 PSTAPGPHVPLMPPSPPSQVTPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQR 518

Query: 455 AADCTHHRVQIEVGTVEVAHQAAVAHSLHKAETEFDLV 342
             +  H R++ +V T+ ++ + AV +S  + ++EFD V
Sbjct: 519 EQEAKHERIENDVATI-LSRRIAVEYSDSEDDSEFDEV 555


>sp|Q5BJU7|WASF1_RAT Wiskott-Aldrich syndrome protein family member
           1 OS=Rattus norvegicus GN=Wasf1 PE=2 SV=1
          Length = 559

 Score = 34.3 bits (77), Expect = 0.58
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
 Frame = -1

Query: 620 PPADLMG*NIPVVPAAVGPVQE--HAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEGAAD 447
           P A LM    P  P+ V P  E      TL  +   +  L +     +  R VEE+   +
Sbjct: 465 PHAPLMP---PSPPSQVLPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQE 521

Query: 446 CTHHRVQIEVGTVEVAHQAAVAHSLHKAETEFDLV 342
             H R++ +V T+ ++ + AV +S  + ++EFD V
Sbjct: 522 AKHERIENDVATI-LSRRIAVEYSDSEDDSEFDEV 555


>sp|Q5NVG8|WASF1_PONAB Wiskott-Aldrich syndrome protein family
           member 1 OS=Pongo abelii GN=WASF1 PE=2 SV=1
          Length = 559

 Score = 34.3 bits (77), Expect = 0.58
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
 Frame = -1

Query: 617 PADLMG*NIPVVPAA----VGPVQE--HAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEG 456
           P+   G ++P++P +    V P  E      TL  +   +  L +     +  R VEE+ 
Sbjct: 459 PSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQR 518

Query: 455 AADCTHHRVQIEVGTVEVAHQAAVAHSLHKAETEFDLV 342
             +  H R++ +V T+ ++ + AV +S  + ++EFD V
Sbjct: 519 EQEAKHERIENDVATI-LSRRIAVEYSDSEDDSEFDEV 555


>sp|Q8R5H6|WASF1_MOUSE Wiskott-Aldrich syndrome protein family
           member 1 OS=Mus musculus GN=Wasf1 PE=1 SV=2
          Length = 559

 Score = 34.3 bits (77), Expect = 0.58
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
 Frame = -1

Query: 620 PPADLMG*NIPVVPAAVGPVQE--HAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEGAAD 447
           P A LM    P  P+ V P  E      TL  +   +  L +     +  R VEE+   +
Sbjct: 465 PHAPLMP---PSPPSQVLPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQE 521

Query: 446 CTHHRVQIEVGTVEVAHQAAVAHSLHKAETEFDLV 342
             H R++ +V T+ ++ + AV +S  + ++EFD V
Sbjct: 522 AKHERIENDVATI-LSRRIAVEYSDSEDDSEFDEV 555


>sp|Q92558|WASF1_HUMAN Wiskott-Aldrich syndrome protein family
           member 1 OS=Homo sapiens GN=WASF1 PE=1 SV=1
          Length = 559

 Score = 34.3 bits (77), Expect = 0.58
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
 Frame = -1

Query: 617 PADLMG*NIPVVPAA----VGPVQE--HAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEG 456
           P+   G ++P++P +    V P  E      TL  +   +  L +     +  R VEE+ 
Sbjct: 459 PSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQR 518

Query: 455 AADCTHHRVQIEVGTVEVAHQAAVAHSLHKAETEFDLV 342
             +  H R++ +V T+ ++ + AV +S  + ++EFD V
Sbjct: 519 EQEAKHERIENDVATI-LSRRIAVEYSDSEDDSEFDEV 555


>sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3
          Length = 1976

 Score = 33.9 bits (76), Expect = 0.76
 Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
 Frame = -1

Query: 539  LRTVESVQKTLEKI--HMVAVDQRTVEEEGAADC---THHRVQIEVG--TVEVAHQAAVA 381
            L T+ES+++  +K+     A+ QR  E+  A D    T +R+Q E+   TV++ HQ  VA
Sbjct: 1384 LGTIESLEEAKKKLLKDAEALSQRLEEKALAYDKLEKTKNRLQQELDDLTVDLDHQRQVA 1443

Query: 380  HSLHKAETEFD--LVQDRTLVGSHSPE 306
             +L K + +FD  L +++++   ++ E
Sbjct: 1444 SNLEKKQKKFDQLLAEEKSISARYAEE 1470


>sp|Q258K2|MYH9_CANFA Myosin-9 OS=Canis familiaris GN=MYH9 PE=2 SV=1
          Length = 1960

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
 Frame = -1

Query: 557  EHAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEGAADC---THHRVQIEVGT--VEVAHQ 393
            E  V  L T E  ++ L+K  +  + QR  E+  A D    T  R+Q E+    V++ HQ
Sbjct: 1374 EDGVGCLETAEEAKRKLQK-DLEGLGQRYEEKVAAYDKLEKTKTRLQQELDDLLVDLDHQ 1432

Query: 392  AAVAHSLHKAETEFD--LVQDRTLVGSHSPE 306
               A +L K + +FD  L +++T+   ++ E
Sbjct: 1433 RRTASNLEKKQKKFDQLLAEEKTISAKYAEE 1463


>sp|P38739|WSC4_YEAST Cell wall integrity and stress response
           component 4 OS=Saccharomyces cerevisiae GN=WSC4 PE=1
           SV=1
          Length = 605

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 31/110 (28%), Positives = 47/110 (42%)
 Frame = +1

Query: 163 SNLTQNWALRS*SINAESAKRSTRGLQPARLQATWSPSVGSTSSTNATSGLWLPTRVLSW 342
           S  T   +  S +++  S+  +T     + L +T S S  S+S+   TS   + T   S 
Sbjct: 200 STTTSTSSSTSTTVSVTSSTSTTTSTTSSTLIST-STSSSSSSTPTTTSSAPISTSTTSS 258

Query: 343 TRSNSVSXXXXXXXXXXXXXXSTVPTSIWTLWWVQSAAPSSSTVLWSTAT 492
           T S S S              +T PTS        S APSS+TV +++ T
Sbjct: 259 T-STSTSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAPSSTTVTYTSTT 307


>sp|Q85FW0|RK2_CYAME 50S ribosomal protein L2, chloroplastic
           OS=Cyanidioschyzon merolae GN=rpl2 PE=3 SV=1
          Length = 245

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 210 RIGQEVHQGVTTSKASGHLEPLSGVNLVHQCNLRAMATNKG 332
           ++G EV  GV      GH+ PLS + L  Q +   +  NKG
Sbjct: 82  KVGDEVKAGVDAELQPGHVWPLSAIPLATQVHSIELVANKG 122


>sp|O15195|VILL_HUMAN Villin-like protein OS=Homo sapiens GN=VILL
           PE=2 SV=3
          Length = 856

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = -1

Query: 593 IPVVPAAVGPV-QEHAVQTLRTVESVQKTL---EKIHMVAVDQRTVEEEGAADCTHHRVQ 426
           +PV   A G   +EH    L   +S + T      +H     Q   E +GAA+    R+Q
Sbjct: 25  VPVPEGAYGNFFEEHCYVILHVPQSPKATQGASSDLHYWVGKQAGAEAQGAAEAFQQRLQ 84

Query: 425 IEVGTVEVAHQAAVAH 378
            E+G   V H+ A  H
Sbjct: 85  DELGGQTVLHREAQGH 100
tr_hit_id Q6GLN2
Definition tr|Q6GLN2|Q6GLN2_XENLA MGC84671 protein OS=Xenopus laevis
Align length 90
Score (bit) 38.1
E-value 0.47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950886|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_O10, 5'
         (650 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6GLN2|Q6GLN2_XENLA MGC84671 protein OS=Xenopus laevis GN=was...    38   0.47 
tr|Q5HZL8|Q5HZL8_XENLA MGC84671 protein OS=Xenopus laevis GN=MGC...    38   0.47 
tr|Q4WC06|Q4WC06_ASPFU Serine-threonine rich protein, putative O...    38   0.47 
tr|B0XR50|B0XR50_ASPFC Serine-threonine rich protein, putative O...    38   0.47 
tr|Q5BJ88|Q5BJ88_XENTR Wasf1 protein OS=Xenopus tropicalis GN=wa...    35   3.0  
tr|B8CNU1|B8CNU1_9GAMM PAS domain protein OS=Shewanella piezotol...    35   3.0  
tr|Q20684|Q20684_CAEEL Protein F52H3.7a, confirmed by transcript...    35   3.0  
tr|Q5ZH00|Q5ZH00_PSEAE RNA polymerase beta subunit (Fragment) OS...    35   4.0  
tr|A3JWX3|A3JWX3_9RHOB Ammonium transporter family protein (Frag...    35   4.0  
tr|Q07CZ1|Q07CZ1_ACACA Alternative oxidase isoform B OS=Acantham...    35   4.0  
tr|Q5SZK7|Q5SZK7_HUMAN WAS protein family, member 1 OS=Homo sapi...    34   6.7  
tr|Q73XT8|Q73XT8_MYCPA Putative uncharacterized protein OS=Mycob...    34   8.8  
tr|B2HL22|B2HL22_MYCMM Putative uncharacterized protein OS=Mycob...    34   8.8  
tr|A0QDK9|A0QDK9_MYCA1 Putative uncharacterized protein OS=Mycob...    34   8.8  
tr|Q4LE45|Q4LE45_HUMAN MYH10 variant protein (Fragment) OS=Homo ...    34   8.8  
tr|B2RWP9|B2RWP9_HUMAN MYH10 protein OS=Homo sapiens GN=MYH10 PE...    34   8.8  

>tr|Q6GLN2|Q6GLN2_XENLA MGC84671 protein OS=Xenopus laevis GN=wasf1
           PE=2 SV=1
          Length = 560

 Score = 38.1 bits (87), Expect = 0.47
 Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
 Frame = -1

Query: 602 G*NIPVVPAAVG--PVQEHAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEGAADCTHHRV 429
           G ++P++P++    P  +    TL  +   +  L +     +  R VEE+   +  H R+
Sbjct: 469 GSHVPLLPSSPSQAPESKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERI 528

Query: 428 QIEVGTVEVAHQAAVAHSLHKAETEFDLVQ 339
           + +V T+ ++ + AV +S  + E+EFD V+
Sbjct: 529 ENDVATI-LSRRIAVEYSDSEDESEFDEVE 557


>tr|Q5HZL8|Q5HZL8_XENLA MGC84671 protein OS=Xenopus laevis
           GN=MGC84671 PE=2 SV=1
          Length = 211

 Score = 38.1 bits (87), Expect = 0.47
 Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
 Frame = -1

Query: 602 G*NIPVVPAAVG--PVQEHAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEGAADCTHHRV 429
           G ++P++P++    P  +    TL  +   +  L +     +  R VEE+   +  H R+
Sbjct: 120 GSHVPLLPSSPSQAPESKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERI 179

Query: 428 QIEVGTVEVAHQAAVAHSLHKAETEFDLVQ 339
           + +V T+ ++ + AV +S  + E+EFD V+
Sbjct: 180 ENDVATI-LSRRIAVEYSDSEDESEFDEVE 208


>tr|Q4WC06|Q4WC06_ASPFU Serine-threonine rich protein, putative
           OS=Aspergillus fumigatus GN=AFUA_8G06150 PE=4 SV=2
          Length = 351

 Score = 38.1 bits (87), Expect = 0.47
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = +1

Query: 211 ESAKRSTR--------GLQPARLQATWSPSVGSTSSTNATSGLWLPTRVLSWTRSNSVSX 366
           ++A+RST          L P R+  + SP + ++SS N +SG + PT   S T S SV+ 
Sbjct: 131 QNARRSTSDPISSPVSSLVPGRVAGSSSPFLAASSSLNPSSGAFFPT---STTASTSVT- 186

Query: 367 XXXXXXXXXXXXXSTVPTSIWTLWWVQSAAPSSSTVLWSTATIWIFSRVFWTLSTVRRVC 546
                        ST  ++  +     +A+ ++ST   +TA+    +    T ST     
Sbjct: 187 ------ASASTTASTTASTTASTTASTTASTTASTTASTTASTTASTTASTTASTT--AS 238

Query: 547 TACSCTGPTAAGTT 588
           T  S T  TAA TT
Sbjct: 239 TTASTTASTAASTT 252


>tr|B0XR50|B0XR50_ASPFC Serine-threonine rich protein, putative
           OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
           FGSC A1163) GN=AFUB_001930 PE=4 SV=1
          Length = 355

 Score = 38.1 bits (87), Expect = 0.47
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
 Frame = +1

Query: 211 ESAKRSTR--------GLQPARLQATWSPSVGSTSSTNATSGLWLPTRVLSWTRSNSVSX 366
           ++A+RST          L P R+  + SP + ++SS N +SG + PT   S T S SV+ 
Sbjct: 131 QNARRSTSDPISSPVSSLVPGRVAGSSSPFLAASSSLNPSSGAFFPT---STTASTSVT- 186

Query: 367 XXXXXXXXXXXXXSTVPTSIWTLWWVQSAAPSSSTVLWSTATIWIFSRVFWTLSTVRRVC 546
                        ST  ++  +     +A+ ++ST   +TA+    +    T ST     
Sbjct: 187 --ASASTTASTTASTTASTTASTTASTTASTTASTTASTTASTTASTTASTTASTT--AS 242

Query: 547 TACSCTGPTAAGTT 588
           T  S T  TAA TT
Sbjct: 243 TTASTTASTAASTT 256


>tr|Q5BJ88|Q5BJ88_XENTR Wasf1 protein OS=Xenopus tropicalis GN=wasf1
           PE=2 SV=1
          Length = 558

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 22/88 (25%), Positives = 44/88 (50%)
 Frame = -1

Query: 602 G*NIPVVPAAVGPVQEHAVQTLRTVESVQKTLEKIHMVAVDQRTVEEEGAADCTHHRVQI 423
           G ++P  P+     + H   TL  +   +  L +     +  R VEE+   +  H R++ 
Sbjct: 470 GSHVPSPPSQAPEPKRHP-STLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIEN 528

Query: 422 EVGTVEVAHQAAVAHSLHKAETEFDLVQ 339
           +V T+ ++ + AV +S  + ++EFD V+
Sbjct: 529 DVATI-LSRRIAVEYSDSEDDSEFDEVE 555


>tr|B8CNU1|B8CNU1_9GAMM PAS domain protein OS=Shewanella piezotolerans
            WP3 GN=swp_2315 PE=4 SV=1
          Length = 1831

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
 Frame = -1

Query: 596  NIPVVPAAVGPVQEHAVQTLRTVESVQKTLEKIHMVAVD------------QRTVEEEGA 453
            N  V P     + E  +Q  + V +++  L + +   VD            +   E+ G 
Sbjct: 1633 NCSVTPELTLLINECQLQLEKMVNTIECALPQTNTTTVDCNLSHGEILKQLETLAEQIGL 1692

Query: 452  ADCTH-HRVQIEVGTVEVAHQAAVAHSLHKAETEFDLVQDRTLVGSHSPEV-ALVDEVD 282
             DCT    +      ++ A  + +A SLHKA  ++D  +  TL+ + S E+ +L ++ D
Sbjct: 1693 LDCTAIDNLDSLFEQLKTAADSQIAQSLHKALVQYDFDEAETLIAAFSNEILSLYEQTD 1751


>tr|Q20684|Q20684_CAEEL Protein F52H3.7a, confirmed by transcript
           evidence OS=Caenorhabditis elegans GN=lec-2 PE=1 SV=2
          Length = 1245

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
 Frame = -1

Query: 566 PVQEHAVQTLRT-VESVQKTLEKIHMVAVDQ--RTVEEEGAADCTHHRVQIEVGT---VE 405
           PV+EH  +   T +ESV+  +E +H+ + +     VE+  +AD T   V+ +  T    E
Sbjct: 665 PVEEHKDEASPTALESVEDVIEAVHVASTESAPAPVEDAASADSTQAPVEEQKDTAAAAE 724

Query: 404 VAHQAAVAHSLHKAETEFDLVQDRTLVGSHSPEVALVDEVDPTEGLQ 264
            +H+ A A   H A  E D+++    V   S E A   E  P+E +Q
Sbjct: 725 PSHEEAQAD--HAASVE-DVIE---AVHIASNESAPTTEAAPSESIQ 765


>tr|Q5ZH00|Q5ZH00_PSEAE RNA polymerase beta subunit (Fragment)
           OS=Pseudomonas aeruginosa GN=rpoB PE=3 SV=1
          Length = 364

 Score = 35.0 bits (79), Expect = 4.0
 Identities = 33/119 (27%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
 Frame = +1

Query: 265 WSPSVGSTSSTNATSGLWLPTRVLSWTRSNSVSXXXXXXXXXXXXXX-STVPTSIWTLWW 441
           W P+  +T      S  WLP  V S     +VS               ST  TS  T   
Sbjct: 217 WVPAWNATWRATPASASWLPVVVCSTRSMPAVSWFAWRITRSRPAKRVSTSTTSPSTP-- 274

Query: 442 VQSAAPSSSTVLWSTATIWIFSRVFWTLSTVR----------RVCTACSCTGPTAAGTT 588
           V +  P+S++V WS    W+ +   W   TVR          R C   SC G  +   T
Sbjct: 275 VPTRTPASTSVRWSARVTWLRAATSW--PTVRPPTWANWPWARTCALRSCPGTASTSKT 331


>tr|A3JWX3|A3JWX3_9RHOB Ammonium transporter family protein
           (Fragment) OS=Rhodobacterales bacterium HTCC2150
           GN=RB2150_10691 PE=4 SV=1
          Length = 181

 Score = 35.0 bits (79), Expect = 4.0
 Identities = 23/89 (25%), Positives = 35/89 (39%)
 Frame = +1

Query: 265 WSPSVGSTSSTNATSGLWLPTRVLSWTRSNSVSXXXXXXXXXXXXXXSTVPTSIWTLWWV 444
           WS ++G+ +S   T   W    + SWT ++ VS                V   I ++WW+
Sbjct: 93  WSETMGTNASDRITGVFWAAFLLFSWTAASIVSGSVIERIRSSALWVHAV--LIGSVWWI 150

Query: 445 QSAAPSSSTVLWSTATIWIFSRVFWTLST 531
             AA       W      I +R+   LST
Sbjct: 151 IDAAWGWHYAGWMVQNWAIMTRMHLVLST 179


>tr|Q07CZ1|Q07CZ1_ACACA Alternative oxidase isoform B
           OS=Acanthamoeba castellanii PE=2 SV=1
          Length = 374

 Score = 35.0 bits (79), Expect = 4.0
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +1

Query: 208 AESAKRSTRGLQPARLQATWSPSVGSTSSTNATSGLWLPTRVLSWTRSNSVS 363
           A++ +  +  L P  + +T S +  +TS+T  T G W     L+W+R+N+ S
Sbjct: 44  AQARRHLSLRLAPTTMTSTTSRTSSATSTTMTTRGRWCQGGALAWSRANTTS 95