DK950836 |
Clone id |
TST38A01NGRL0009_M05 |
Library |
TST38 |
Length |
639 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_M05. 5' end sequence. |
Accession |
DK950836 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1553Contig1 |
Sequence |
GCTGAGGACCAGACAATGGACCATCGTTCAGATGTAGACATGAGTTCAAGGGACACTGAG CAAGGGTCTGTATTGAAGGGAGTAGAACCTATTCTTGAACGCATTTGTCAACAAGTAGGA GGGGATACGAATGACAATCAAATGACAGTCCCTGTGGAGGGCAAGGATGTAGAAATGACA GGTGACAAGACTGAAGAAGGGGATGGTGGCCTTTTAGCAGGTAATCTTACTCAAGCAGAC GAGTTACCTGAGGAGATGGACATTCAGGAGGATGACCTTATAAAGACTGTCATTGAGGCC TTTGAGGTTCGGCACTTAGTTGAGACTAGACCAATTCCTGTTCTCGTTAAAGGGAAAGAG GTGGACCTTGTTCAGCTCTCTTTTCAAGTTAGAGCATGTGGTGGCTAAGAACAGGTTAGC TTGTGGTCTTCTATATCAAAAAGCCTTGGGTTTGGGCAGGAGTGCGGCCCGTTGCTGAAG CTGGTGTATGTGAAATACTTGAAGGGTGTAGAGAATAGAAGATTAGTAGCAAATCAAGCT GTACAGAGCTCACCAAATGCCTTAAAAAGGGAAAATGAAGATAGTGTAAAGCCAGAGTCT GTTAAGAGTCAATCAAAGAGCCGTGGTGTCACCTCTGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2SSR3 |
Definition |
sp|Q2SSR3|ENO_MYCCT Enolase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) |
Align length |
65 |
Score (bit) |
33.9 |
E-value |
0.74 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TW59 |
Definition |
tr|A9TW59|A9TW59_PHYPA ARID/BRIGHT DNA-binding domain-containing protein OS=Physcomitrella patens subsp. patens |
Align length |
155 |
Score (bit) |
55.1 |
E-value |
4.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950836|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_M05, 5' (639 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TW59|A9TW59_PHYPA ARID/BRIGHT DNA-binding domain-containing... 55 4e-06 tr|A9RMF8|A9RMF8_PHYPA ARID/BRIGHT DNA-binding domain-containing... 52 2e-05 tr|B6KXH7|B6KXH7_BRAFL Putative uncharacterized protein OS=Branc... 39 0.27 tr|B7F182|B7F182_ORYSJ cDNA clone:002-142-B09, full insert seque... 37 1.0 tr|A3R6T2|A3R6T2_PLAFA Erythrocyte membrane protein 1 (Fragment)... 36 1.7 tr|Q0H0R7|Q0H0R7_9PEZI Polyketide synthase OS=Ophiostoma piceae ... 36 2.3 tr|B4N4B6|B4N4B6_DROWI GK11899 OS=Drosophila willistoni GN=GK118... 35 3.9 tr|Q1ZRM0|Q1ZRM0_9VIBR Putative uncharacterized protein OS=Vibri... 35 5.1 tr|A5KV65|A5KV65_9GAMM Putative uncharacterized protein yieM OS=... 35 5.1 tr|Q580Q2|Q580Q2_9TRYP Putative uncharacterized protein OS=Trypa... 35 5.1 tr|B0EKD1|B0EKD1_ENTDI Putative uncharacterized protein OS=Entam... 35 5.1 tr|B1YT16|B1YT16_BURA4 Lipoprotein releasing system, transmembra... 34 6.6 tr|Q8KSY0|Q8KSY0_9ACTO Putative cytochrome P450 GrhO3 OS=Strepto... 34 6.6 tr|A3C582|A3C582_ORYSJ Putative uncharacterized protein OS=Oryza... 34 6.6 tr|Q16MQ6|Q16MQ6_AEDAE Putative uncharacterized protein OS=Aedes... 34 6.6 tr|Q1MLD6|Q1MLD6_RHIL3 Putative motility protein OS=Rhizobium le... 34 8.7 tr|Q0BDR6|Q0BDR6_BURCM Lipoprotein releasing system, transmembra... 34 8.7 tr|A9L2Q3|A9L2Q3_SHEB9 Putative uncharacterized protein OS=Shewa... 34 8.7 tr|A6WJU0|A6WJU0_SHEB8 Putative uncharacterized protein OS=Shewa... 34 8.7 tr|A3D825|A3D825_SHEB5 Putative uncharacterized protein OS=Shewa... 34 8.7 tr|B1FQ40|B1FQ40_9BURK Lipoprotein releasing system, transmembra... 34 8.7 tr|B0IS17|B0IS17_RHILT OmpA/MotB domain protein OS=Rhizobium leg... 34 8.7 tr|A3Z525|A3Z525_9SYNE Putative uncharacterized protein OS=Synec... 34 8.7 tr|B6PIX8|B6PIX8_BRAFL Putative uncharacterized protein OS=Branc... 34 8.7 tr|B0EM67|B0EM67_ENTDI Putative uncharacterized protein OS=Entam... 34 8.7 tr|A5K9R5|A5K9R5_PLAVI Bromodomain protein, putative OS=Plasmodi... 34 8.7
>tr|A9TW59|A9TW59_PHYPA ARID/BRIGHT DNA-binding domain-containing protein OS=Physcomitrella patens subsp. patens GN=ARID1506 PE=4 SV=1 Length = 982
Score = 55.1 bits (131), Expect = 4e-06 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 9/155 (5%) Frame = +1
Query: 163 KDVEMTGDKTEEGDGGLLAGNLTQADELPE-EMDIQEDD-----LIKTVIEAFEVRHLVE 324 K+VE E GG LT +++ E D ED L+ T E R Sbjct: 13 KEVEAEESGEVELGGGEKRSKLTASEDFDVGESDEDEDSRMGVLLLNTASRILEARR--R 70
Query: 325 TRPIPVLVKGKEVDLVQLSFQVRACGG*EQVS---LWSSISKSLGFGQECGPXXXXXXXX 495 TRP+PVL+ K VDL+ L +V + GG +V+ LW ++S +L G +CGP Sbjct: 71 TRPLPVLMGDKAVDLLALHSRVSSMGGYSKVTEAGLWGAVSDALELGLDCGPGLKL---- 126
Query: 496 XXXGVENRRLVANQAVQSSPNALKRENEDSVKPES 600 V + L A AV++S + D+ +P S Sbjct: 127 ----VYVKYLKALDAVKNSKELKNSSSLDAAQPSS 157
>tr|A9RMF8|A9RMF8_PHYPA ARID/BRIGHT DNA-binding domain-containing protein OS=Physcomitrella patens subsp. patens GN=ARID1505 PE=4 SV=1 Length = 844
Score = 52.4 bits (124), Expect = 2e-05 Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 4/120 (3%) Frame = +1
Query: 124 DTNDNQMTVPVEGK-DVEMTGDKTEEGDGGLLAGNLTQADELPEEMDIQEDDLIKTVIEA 300 D + + V VE +VE G + L+ + DE +E L+ TV Sbjct: 7 DMKNKRKEVEVEDAGEVESGGAEKRSKPNALIELGGRERDE--DETSSSGGSLLNTVQRI 64
Query: 301 FEVRHLVETRPIPVLVKGKEVDLVQLSFQVRACGG*EQVS---LWSSISKSLGFGQECGP 471 E R RP+PVL+ K VDL L +V + GG +V+ +WS IS +LG G ECGP Sbjct: 65 LEARK--RFRPLPVLMGDKVVDLSALHSRVNSMGGYSKVTEAGMWSVISDALGLGLECGP 122
>tr|B6KXH7|B6KXH7_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_63599 PE=4 SV=1 Length = 580
Score = 38.9 bits (89), Expect = 0.27 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Frame = +1
Query: 76 KGVEPILERICQQVGGDTNDNQMTVPVEGKDVEMTGDKTE--EGDGGLLAGNLTQADELP 249 K ++ +L + + D + P+EG E GD+ E E D + +G+ + +E Sbjct: 410 KDIDKVLGNLTMETTSDMLAMESMGPMEGAMEEEEGDEEEDSEEDEEMSSGDGEEEEE-N 468
Query: 250 EEMDIQEDDLIKTVIEAFEVRHLVETRPIPVLVKGKE 360 +EMD +ED+ IK V E+ +L E I V VK KE Sbjct: 469 DEMDEEEDEFIKPVPES----NLAELGTISVNVKAKE 501
>tr|B7F182|B7F182_ORYSJ cDNA clone:002-142-B09, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 289
Score = 37.0 bits (84), Expect = 1.0 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Frame = +1
Query: 208 GLLAGNLTQADELPEEMDIQEDDLIKTVIEAFEVRH----LVETRPIPVLV-KGKEVDLV 372 G LAG + LPE+ + ++ + ++ +F + ++ RP+P L+ G V L+ Sbjct: 73 GYLAGQELPSITLPED---RAPEVFERLLGSFLAQSHGPGVLPPRPMPPLLGDGTPVGLL 129
Query: 373 QLSFQVRACGG*EQVSLWSSISKSLG 450 +L VRACGG E V W++ ++ G Sbjct: 130 RLYLAVRACGGFEAVRSWAAAAEMAG 155
>tr|A3R6T2|A3R6T2_PLAFA Erythrocyte membrane protein 1 (Fragment) OS=Plasmodium falciparum GN=IT4_var30 PE=4 SV=1 Length = 1135
Score = 36.2 bits (82), Expect = 1.7 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = +1
Query: 145 TVPVEGKDVEMTGDKTEEGDGGLLAGNL--TQADELPEEMDIQEDDLIKTVIEAFEVRHL 318 T P E +D E ++ +E + G G T A+ LP+E ++ E+ + KT + EV + Sbjct: 675 TAPTEEEDEEEEEEEEDEDEDGDEVGGEEETAAEALPDETEVVEETVAKTTTPSVEVCKI 734
Query: 319 VET 327 VET Sbjct: 735 VET 737
>tr|Q0H0R7|Q0H0R7_9PEZI Polyketide synthase OS=Ophiostoma piceae GN=TOPA45 PE=4 SV=2 Length = 2180
Score = 35.8 bits (81), Expect = 2.3 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = +1
Query: 112 QVGGDTNDNQMTVPVEGKDVEMTGDKTEEGDGGLLAGNLTQADELPEEMDIQEDDLI 282 + G +D+ +T P+E D D E GGL A LT + EEM + D+++ Sbjct: 1757 ETDGMKSDSAVTTPMEESDTGSIKDGGEVSAGGLTAHQLTVRTTIAEEMQVDVDEIV 1813
>tr|B4N4B6|B4N4B6_DROWI GK11899 OS=Drosophila willistoni GN=GK11899 PE=4 SV=1 Length = 270
Score = 35.0 bits (79), Expect = 3.9 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Frame = +1
Query: 19 DHRSDVDMSSRDTEQGSVLKGVEPILE-----RICQQVGGDTNDNQMTVPVEGKDVEMTG 183 D ++ V + ++T QG ++GV +++ R+ + D N Q V G Sbjct: 110 DGKTRVLQNRKETRQGDEVRGVYSVVDPDGTLRVVKYTADDANGFQAEVITNGVATLHGH 169
Query: 184 DKTEEGDGGLLAGNLTQADELPEEMDIQEDD 276 +EG+ GLLA + E+ D +E+D Sbjct: 170 GNADEGNAGLLAVDQHVRHEIEHNNDAEEED 200
>tr|Q1ZRM0|Q1ZRM0_9VIBR Putative uncharacterized protein OS=Vibrio angustum S14 GN=VAS14_06288 PE=4 SV=1 Length = 1375
Score = 34.7 bits (78), Expect = 5.1 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = +1
Query: 1 AEDQTMDH-RSDVDMSSRDTEQGSVLKGVEPILERICQQVGGDTNDNQMTVPVEGKDVEM 177 AE+Q+ D +S+++ S D E + + L+ + G D + + TV E D Sbjct: 592 AEEQSQDRAKSEINDESNDVEVKASENIDQDELDALFGSFGADLPELEQTVSGEQTDEIQ 651
Query: 178 TGDKTEEGDGGLLAGNLTQADELPEEMDIQEDDLI 282 ++ E L L + DEL +++++ED + Sbjct: 652 DDERVFEEGSTALLDELVEDDELSSDIELEEDSTV 686
>tr|A5KV65|A5KV65_9GAMM Putative uncharacterized protein yieM OS=Vibrionales bacterium SWAT-3 GN=yieM PE=4 SV=1 Length = 481
Score = 34.7 bits (78), Expect = 5.1 Identities = 26/121 (21%), Positives = 60/121 (49%) Frame = +1
Query: 25 RSDVDMSSRDTEQGSVLKGVEPILERICQQVGGDTNDNQMTVPVEGKDVEMTGDKTEEGD 204 ++D+ + R E + KG++ I E++ + G + + + PVE +++M +K++E Sbjct: 193 KTDLTVMKRHAEFLNKHKGLQEIAEKLGRMAGMEDDPSLHKAPVE--ELQMVEEKSDEAV 250
Query: 205 GGLLAGNLTQADELPEEMDIQEDDLIKTVIEAFEVRHLVETRPIPVLVKGKEVDLVQLSF 384 ++ + ++D+L + + + L +E +HL + R + KGK L ++ Sbjct: 251 DDIV--GIHESDDLNKMLPNETMFLAYPELEVIFYKHLADKRLLSYRSKGKSRTLRKVKA 308
Query: 385 Q 387 Q Sbjct: 309 Q 309
>tr|Q580Q2|Q580Q2_9TRYP Putative uncharacterized protein OS=Trypanosoma brucei GN=Tb927.4.5330 PE=4 SV=1 Length = 883
Score = 34.7 bits (78), Expect = 5.1 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Frame = +1
Query: 19 DHRSDVDMSSR-DTEQGSVLKGV----EPILERICQQVGGDTNDNQMTVPVEGKDVEM 177 DHR +D +++ D +G + +G+ +PIL R GGD ND P+ GK VEM Sbjct: 514 DHRKVLDSATQTDNTEGRMCQGLFLLSQPILNREKTNCGGD-NDTSYLKPMSGKGVEM 570
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