DK950427 |
Clone id |
TST38A01NGRL0008_K02 |
Library |
TST38 |
Length |
661 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_K02. 5' end sequence. |
Accession |
DK950427 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CACGACTTCATACCGACAATTTATCATTATCATTCTAGAACGTTCCGCCTTAAAGGTTGG ATAGTGCAGCATCTTGGAGCAAGGTCCCCGTTTCAACGAGGGTTTTCTGCTCGCGACGCC CTCTTCACTTTTGAATCGCCAACCGTTGTGAGTAGCGTCTGTGCACTTTTTGGGTCTTCT CTGCGTCTCTTTCGTCGATGATCCTGCAACCTACGGCGTACTTTTGGGTTTCCTCTCTGT CTCGATCTCGCAAGCAAAGGGCTTGTCTCGAGCCTCAATATCCTGAGTAAGTGCTCCTTA ACAAGAAACCCTAGCCGTATTACAAGGGCTGCGCTGTTTCTCAGCTTGCTGTACGAAACG GGCTGGGAGCCTATTAGGGATTGAGTGGAAGTCAGCTTAAGCGACACTTATATATAAAAA CAAGGCAGACGAAGCTGTCATGTGAGCAAATCTGAACATGGGTATTGATTACTACAATGT ACTGAAAGTTGGGCGAAATGCATCTGCTGAGGATCTTAAAAGAGCTTACAAGAGGCTTGC CATGAAATGGCATCCTGATAAGAATCCTGGTAACAACAGGGAGGCAGAGGCCAATTTCAA GCAAGTTTCAGAAGCTTATGAGGTTCTAGGAGATTCCAAGAAAAGATCTATCTATGATCG G |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0III6 |
Definition |
sp|Q0III6|DNJB6_BOVIN DnaJ homolog subfamily B member 6 OS=Bos taurus |
Align length |
66 |
Score (bit) |
104.0 |
E-value |
4.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLM7 |
Definition |
tr|B8LLM7|B8LLM7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
68 |
Score (bit) |
115.0 |
E-value |
2.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950427|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_K02, 5' (661 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LLM7|B8LLM7_PICSI Putative uncharacterized protein OS=Picea... 115 2e-24 tr|A7P5H1|A7P5H1_VITVI Chromosome chr4 scaffold_6, whole genome ... 114 5e-24 tr|Q6EIX8|Q6EIX8_TOBAC Potyviral capsid protein interacting prot... 113 9e-24 tr|A7QI31|A7QI31_VITVI Chromosome chr17 scaffold_101, whole geno... 113 1e-23 tr|B4F810|B4F810_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|Q6EIX7|Q6EIX7_TOBAC Potyviral capsid protein interacting prot... 111 3e-23 tr|B8LQ65|B8LQ65_PICSI Putative uncharacterized protein OS=Picea... 110 8e-23 tr|B8LN93|B8LN93_PICSI Putative uncharacterized protein OS=Picea... 110 8e-23 tr|A9PES7|A9PES7_POPTR Putative uncharacterized protein OS=Popul... 110 1e-22 tr|A9U4C9|A9U4C9_PHYPA Predicted protein OS=Physcomitrella paten... 109 1e-22 tr|Q84SD3|Q84SD3_ORYSJ Os08g0161900 protein OS=Oryza sativa subs... 109 2e-22 tr|A9SWH6|A9SWH6_PHYPA Predicted protein OS=Physcomitrella paten... 109 2e-22 tr|A2YRH3|A2YRH3_ORYSI Putative uncharacterized protein OS=Oryza... 109 2e-22 tr|Q9SY77|Q9SY77_ARATH F14N23.23 (Putative heat-shock protein) O... 108 2e-22 tr|Q8LAU1|Q8LAU1_ARATH Putative heat-shock protein OS=Arabidopsi... 108 2e-22 tr|A9SIP0|A9SIP0_PHYPA Predicted protein OS=Physcomitrella paten... 108 3e-22 tr|Q9SR91|Q9SR91_ARATH At3g08910 OS=Arabidopsis thaliana GN=At3g... 107 5e-22 tr|Q8L8S5|Q8L8S5_ARATH Putative heat shock protein OS=Arabidopsi... 107 5e-22 tr|A9TAE3|A9TAE3_PHYPA Predicted protein OS=Physcomitrella paten... 107 5e-22 tr|A7Q2P9|A7Q2P9_VITVI Chromosome chr1 scaffold_46, whole genome... 107 7e-22 tr|A9TBJ3|A9TBJ3_PHYPA Predicted protein OS=Physcomitrella paten... 107 9e-22 tr|A2Q505|A2Q505_MEDTR Heat shock protein DnaJ OS=Medicago trunc... 107 9e-22 tr|Q9FEW7|Q9FEW7_SOLLC DnaJ like protein OS=Solanum lycopersicum... 106 1e-21 tr|Q6Z6Z5|Q6Z6Z5_ORYSJ Os02g0128400 protein OS=Oryza sativa subs... 106 1e-21 tr|Q9XFD9|Q9XFD9_ORYSJ Os02g0306900 protein OS=Oryza sativa subs... 106 1e-21 tr|Q9SP09|Q9SP09_TOBAC DnaJ-like protein OS=Nicotiana tabacum PE... 106 1e-21 tr|Q9SIL3|Q9SIL3_ARATH Putative heat shock protein (At2g20560/T1... 106 1e-21 tr|A7QPS1|A7QPS1_VITVI Chromosome chr10 scaffold_138, whole geno... 106 1e-21 tr|A7QHR0|A7QHR0_VITVI Chromosome chr8 scaffold_99, whole genome... 106 1e-21 tr|Q4VRW3|Q4VRW3_TOBAC Putative BY-2 cell cycle-related protein ... 105 2e-21
>tr|B8LLM7|B8LLM7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 336
Score = 115 bits (289), Expect = 2e-24 Identities = 50/68 (73%), Positives = 61/68 (89%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYYNVL VGRNA+ +DLK+AY++LAMKWHPDKNP N +EAEA FKQ+SEAYEVL D+ Sbjct: 1 MGVDYYNVLNVGRNATEDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDN 60
Query: 638 KKRSIYDR 661 +KR IYD+ Sbjct: 61 QKRQIYDQ 68
>tr|A7P5H1|A7P5H1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032531001 PE=4 SV=1 Length = 339
Score = 114 bits (285), Expect = 5e-24 Identities = 49/68 (72%), Positives = 61/68 (89%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYYNVLKVG+NA+ EDLK++Y+RLAMKWHPDKNP N +EAEA FKQ+SEAYEVL D Sbjct: 1 MGVDYYNVLKVGKNATDEDLKKSYRRLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDP 60
Query: 638 KKRSIYDR 661 +K+ +YD+ Sbjct: 61 QKKVVYDQ 68
>tr|Q6EIX8|Q6EIX8_TOBAC Potyviral capsid protein interacting protein 2a OS=Nicotiana tabacum GN=CPIP2a PE=2 SV=1 Length = 305
Score = 113 bits (283), Expect = 9e-24 Identities = 52/67 (77%), Positives = 58/67 (86%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYYNVLKV RNAS EDLKR+YKRLAMKWHPDKN N +EAEA FKQ+SEAY+VL D Sbjct: 1 MGLDYYNVLKVSRNASEEDLKRSYKRLAMKWHPDKNSQNKKEAEAKFKQISEAYDVLSDP 60
Query: 638 KKRSIYD 658 +KR IYD Sbjct: 61 QKRQIYD 67
>tr|A7QI31|A7QI31_VITVI Chromosome chr17 scaffold_101, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000072001 PE=4 SV=1 Length = 306
Score = 113 bits (282), Expect = 1e-23 Identities = 50/67 (74%), Positives = 58/67 (86%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYYN+LKV RNAS +DL+RAY+RLAM WHPDKNP N REAEA FKQ+SEAY+VL D Sbjct: 1 MGVDYYNILKVNRNASEDDLRRAYRRLAMIWHPDKNPSNKREAEAKFKQISEAYDVLSDP 60
Query: 638 KKRSIYD 658 +KR IYD Sbjct: 61 QKRQIYD 67
>tr|B4F810|B4F810_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 346
Score = 112 bits (280), Expect = 2e-23 Identities = 49/68 (72%), Positives = 61/68 (89%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYY VL+VGR AS ++LK+AY++LAMKWHPDKNP N +EAEA FKQ+SEAYEVL DS Sbjct: 1 MGVDYYKVLQVGRGASDDELKKAYRKLAMKWHPDKNPSNKKEAEAKFKQISEAYEVLSDS 60
Query: 638 KKRSIYDR 661 +KR+IYD+ Sbjct: 61 QKRAIYDQ 68
>tr|Q6EIX7|Q6EIX7_TOBAC Potyviral capsid protein interacting protein 2b OS=Nicotiana tabacum GN=CPIP2b PE=2 SV=1 Length = 305
Score = 111 bits (278), Expect = 3e-23 Identities = 51/67 (76%), Positives = 58/67 (86%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYY+VLKV RNAS EDLKR+YKRLAMKWHPDKN N +EAEA FKQ+SEAY+VL D Sbjct: 1 MGLDYYDVLKVSRNASEEDLKRSYKRLAMKWHPDKNSQNKKEAEAKFKQISEAYDVLSDP 60
Query: 638 KKRSIYD 658 +KR IYD Sbjct: 61 QKRQIYD 67
>tr|B8LQ65|B8LQ65_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 341
Score = 110 bits (275), Expect = 8e-23 Identities = 48/68 (70%), Positives = 59/68 (86%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYY +L VGR AS +DLK+AY++LAMKWHPDKNP N +EAEA FKQ+SEAYEVL D Sbjct: 1 MGVDYYIILNVGRRASEDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDP 60
Query: 638 KKRSIYDR 661 +KR+IYD+ Sbjct: 61 QKRAIYDQ 68
>tr|B8LN93|B8LN93_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 182
Score = 110 bits (275), Expect = 8e-23 Identities = 48/68 (70%), Positives = 59/68 (86%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYY +L VGR AS +DLK+AY++LAMKWHPDKNP N +EAEA FKQ+SEAYEVL D Sbjct: 1 MGVDYYIILNVGRRASEDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDP 60
Query: 638 KKRSIYDR 661 +KR+IYD+ Sbjct: 61 QKRAIYDQ 68
>tr|A9PES7|A9PES7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 317
Score = 110 bits (274), Expect = 1e-22 Identities = 48/67 (71%), Positives = 57/67 (85%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYYN+LK+ RNA+ ED+K+AYKRLAMKWHPDKNP N +EAEA FK +SEAY+VL D Sbjct: 1 MGVDYYNILKLNRNATEEDMKKAYKRLAMKWHPDKNPVNKKEAEAKFKLISEAYDVLSDP 60
Query: 638 KKRSIYD 658 KR IYD Sbjct: 61 NKRQIYD 67
>tr|A9U4C9|A9U4C9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_61955 PE=4 SV=1 Length = 349
Score = 109 bits (273), Expect = 1e-22 Identities = 48/68 (70%), Positives = 59/68 (86%) Frame = +2
Query: 458 MGIDYYNVLKVGRNASAEDLKRAYKRLAMKWHPDKNPGNNREAEANFKQVSEAYEVLGDS 637 MG+DYYNVLKV + A+ +DLK+AY++LAMKWHPDKNP N +EAEA FKQ+SEAYEVL D Sbjct: 1 MGVDYYNVLKVPKTATEDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDP 60
Query: 638 KKRSIYDR 661 +KR IYD+ Sbjct: 61 QKRLIYDQ 68
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