DK950385
Clone id TST38A01NGRL0008_I07
Library
Length 622
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_I07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
TTTGAAATGGATCATGAGTTTGATCACAAGTTGAATTTTATGTCCAATGATTATCAACTC
TTTCCAACAGAAAGTGACTGTGTTGGTTTGGATCAATCTATTTTTCCACTCTTGCCTGAC
CTTCCAGCACCTGCTCATGATTTCAATTTTTCTCCCAGAGCTCTGCACCCAAGCCGAATT
CCTCTTCAAATTTGGCCAGATGCGTCAGCGTTAGAAGAGGATGGCTACTTGGGCTCCTCT
CGCAAAGTCTTGGATGGAGGTTCGAGTTTATGGAATGGTAGGATTGAATATTGGCAGAAG
TTGATAGCAGATAAAAAGTCAGACATGAAGTCTCCAAGAGGTGCTCGTGCTGAGCGCAGT
CCCAGACTTTGCGCGGAGTTCTGTCCCTTGACCGAGGAGGAGGAGGTCCTCGTTTTTGCA
GATAACGACACCAAAACGAATGATGCTTTGCAAGATTCTGATCTCATATCCCCCAGGGCA
ATGTCTTTGAGGAGTGTTAGCTTCCACAATCGGAAGCAGAGATATTTGGACGGCTGTGAA
CATAGGATGCCAGCTTCTGAAACAACAGGGAAGAACAATGCTAATGGTGGTTCTCCCCCT
TTCTCTCTTGCAGACATGAGTG
■■Homology search results ■■ -
sp_hit_id Q8RSQ2
Definition sp|Q8RSQ2|BAR_RHOER Barbiturase OS=Rhodococcus erythropolis
Align length 78
Score (bit) 35.4
E-value 0.24
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950385|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_I07, 5'
(622 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8RSQ2|BAR_RHOER Barbiturase OS=Rhodococcus erythropolis GN=b... 35 0.24

>sp|Q8RSQ2|BAR_RHOER Barbiturase OS=Rhodococcus erythropolis GN=bar
PE=1 SV=3
Length = 369

Score = 35.4 bits (80), Expect = 0.24
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1

Query: 154 PRALHPSRIPLQIWPDASALE---EDGYLGSSRKVLDGGSSLWNGRIEYWQKLIADKKSD 324
P A+ ++PL DAS L +DG L + R + G + NG + + ++IAD+
Sbjct: 2 PEAIEVRKVPLHSVSDASELAKLIDDGVLEADRVIAVIGKTEGNGGVNDYTRIIADRA-- 59

Query: 325 MKSPRGARAERSPRLCAE 378
+ A+ RSP AE
Sbjct: 60 FREVLSAKGNRSPEEVAE 77


tr_hit_id Q4ZVY6
Definition tr|Q4ZVY6|Q4ZVY6_PSEU2 Ribonuclease E and G OS=Pseudomonas syringae pv. syringae (strain B728a)
Align length 156
Score (bit) 40.0
E-value 0.11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950385|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_I07, 5'
(622 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4ZVY6|Q4ZVY6_PSEU2 Ribonuclease E and G OS=Pseudomonas syrin... 40 0.11
tr|Q87YF9|Q87YF9_PSESM Ribonuclease, Rne/Rng family protein OS=P... 40 0.15
tr|A0KGX3|A0KGX3_AERHH Chitinase A OS=Aeromonas hydrophila subsp... 35 3.6
tr|Q48L50|Q48L50_PSE14 Ribonuclease, Rne/Rng family protein OS=P... 35 4.7
tr|Q59LE2|Q59LE2_CANAL Putative uncharacterized protein NRO96 OS... 35 4.7
tr|Q59LD1|Q59LD1_CANAL Putative uncharacterized protein NRO96 OS... 35 4.7
tr|B8FZ99|B8FZ99_DESHD ABC transporter related OS=Desulfitobacte... 34 6.2
tr|B5DML1|B5DML1_DROPS GA27553 OS=Drosophila pseudoobscura pseud... 34 6.2
tr|Q9T0Z9|Q9T0Z9_9CAUD Tail fiber protein OS=Yersinia phage phiY... 34 8.0
tr|Q4DLR6|Q4DLR6_TRYCR Putative uncharacterized protein (Fragmen... 34 8.0

>tr|Q4ZVY6|Q4ZVY6_PSEU2 Ribonuclease E and G OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=Psyr_1638 PE=4 SV=1
Length = 1120

Score = 40.0 bits (92), Expect = 0.11
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Frame = +1

Query: 151 SPRALHPSRIPLQIWPDASALEEDGYLGSSRKVLDGGSSLWNGRIEYWQKLIADKKSDMK 330
+PR P+R + P + ED + R+ LD ++ R E ++ +++
Sbjct: 680 TPREERPARTTRERKPREA--REDRPVRELREPLDAAPAVSLAREERPERAPREERQ--- 734

Query: 331 SPRGARAERSPRLCAEFCPLTEEEEVLVFADNDTKTNDALQD----SDLISPRAMSLRSV 498
PR R ER PR ++EEEEVL+ N+ +TN+ Q+ S+ PR S
Sbjct: 735 -PRAPREERQPRAEQAAAAVSEEEEVLL---NEEQTNNENQEGNDGSEGDRPRRRSRGQR 790

Query: 499 SFHNRKQRYLDGCEHRMPASETTGKNNANGGSPPFS 606
NR++R D + + SE G N G + S
Sbjct: 791 RRSNRRERQRDANGNVIEGSEENG-NEEEGSATDLS 825


>tr|Q87YF9|Q87YF9_PSESM Ribonuclease, Rne/Rng family protein
OS=Pseudomonas syringae pv. tomato GN=PSPTO3841 PE=4 SV=1
Length = 1128

Score = 39.7 bits (91), Expect = 0.15
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +1

Query: 328 KSPRGARAERSPRLCAEFCPLTEEEEVLVFADNDTKTNDALQD----SDLISPRAMSLRS 495
+ PR R ER PR ++EEEEVL+ ND + ND QD S+ PR S
Sbjct: 739 RQPRAPREERQPRAEQAAVAVSEEEEVLL---NDEQANDDNQDGNDGSEGDRPRRRSRGQ 795

Query: 496 VSFHNRKQRYLDGCEHRMPASETTGKNNANGGSPPFSLADMS 621
NR++R D + + SE G + NG + D S
Sbjct: 796 RRRSNRRERQRDANGNVIEGSEENG-SEENGAEETVNDEDNS 836


>tr|A0KGX3|A0KGX3_AERHH Chitinase A OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=AHA_0977
PE=4 SV=1
Length = 869

Score = 35.0 bits (79), Expect = 3.6
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1

Query: 223 GYLGSSRKVLDGGSSLWNGRIEYWQKLIADKKSDMKSPRGARAERSPRLC-AEFCPLTEE 399
G +G + KVL G +W+G A ++ K +G R + LC A+ C L+++
Sbjct: 72 GDVGQTAKVLLDGKEVWSGAAS------ASGTANFKVTKGGRYQMQVALCNADGCTLSDK 125

Query: 400 EEVLVFADND 429
+E+LV AD D
Sbjct: 126 KEILV-ADTD 134


>tr|Q48L50|Q48L50_PSE14 Ribonuclease, Rne/Rng family protein
OS=Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6) GN=PSPPH_1632 PE=4 SV=1
Length = 1129

Score = 34.7 bits (78), Expect = 4.7
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 10/164 (6%)
Frame = +1

Query: 151 SPRALHPSRIPLQIWPDASALEEDGYLGSSRKVLDGGSSLWNGRIEYWQKLIADKKSDMK 330
+PR P+R + P + ED + R+ LD ++ R E ++ +++
Sbjct: 684 APREERPARTSRERKPREA--REDRPVRELREPLDAAPAVNLAREERPERAPREERQ--- 738

Query: 331 SPRGARAERSPRLCAEFCPLTEEEEVLVFADNDTKTNDALQD----SDLISPRAMSLRSV 498
PR R ER PR ++EEE +L N+ + ND Q+ S+ PR S
Sbjct: 739 -PRAPREERQPRAEQAAAAVSEEEVLL----NEEQINDENQEGNDGSEGDRPRRRSRGQR 793

Query: 499 SFHNRKQRYLDGCEHRMPASETTGK------NNANGGSPPFSLA 612
NR++R D + + SE G NA GS L+
Sbjct: 794 RRSNRRERQRDANGNVIEGSEENGSEENGSAENAEQGSSATDLS 837


>tr|Q59LE2|Q59LE2_CANAL Putative uncharacterized protein NRO96
OS=Candida albicans GN=NRO96 PE=4 SV=1
Length = 556

Score = 34.7 bits (78), Expect = 4.7
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Frame = +1

Query: 415 FADNDTKTNDALQDSDLISPRAMSLRSVSF-------HNRKQRY-----LDGCEHRMPAS 558
F +N+ ND D+D+ISP MS + + F + K RY D ++ AS
Sbjct: 442 FGNNNNSNNDDDNDNDIISPCCMSCQKIEFNVPRGIEYGYKNRYKNIWPYDHSRVKLTAS 501

Query: 559 ETTGKNNANGG-SPPFS 606
NN N +PP S
Sbjct: 502 TNNNNNNNNNNHNPPSS 518


>tr|Q59LD1|Q59LD1_CANAL Putative uncharacterized protein NRO96
OS=Candida albicans GN=NRO96 PE=4 SV=1
Length = 542

Score = 34.7 bits (78), Expect = 4.7
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Frame = +1

Query: 415 FADNDTKTNDALQDSDLISPRAMSLRSVSF-------HNRKQRY-----LDGCEHRMPAS 558
F +N+ ND D+D+ISP MS + + F + K RY D ++ AS
Sbjct: 428 FGNNNNSNNDDDNDNDIISPCCMSCQKIEFNVPRGIEYGYKNRYKNIWPYDHSRVKLTAS 487

Query: 559 ETTGKNNANGG-SPPFS 606
NN N +PP S
Sbjct: 488 TNNNNNNNNNNHNPPSS 504


>tr|B8FZ99|B8FZ99_DESHD ABC transporter related
OS=Desulfitobacterium hafniense (strain DCB-2)
GN=Dhaf_0113 PE=4 SV=1
Length = 919

Score = 34.3 bits (77), Expect = 6.2
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1

Query: 244 KVLDGGSSLWNGRIEYWQKLIADK-KSDMKSPRGARAERSPRLCAEFCPLTEEEEVLVFA 420
+VL G S LW+ +I QK + +K +SD + A A RL A +TEE E V A
Sbjct: 179 QVLQGVSDLWDKKIAAEQKRLEEKGRSDQRLMANAMA----RLAA----ITEEVETKVLA 230

Query: 421 DNDTKTNDALQDSDLISPRAMSLRSVS 501
D +T D L D+ + R M + V+
Sbjct: 231 D---QTGDPLLDACRLVGRTMQIGIVA 254


>tr|B5DML1|B5DML1_DROPS GA27553 OS=Drosophila pseudoobscura
pseudoobscura GN=GA27553 PE=4 SV=1
Length = 342

Score = 34.3 bits (77), Expect = 6.2
Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 3/177 (1%)
Frame = +1

Query: 64 PTESDCVGLDQSIFXXXXXXXXXXHDFNFSPRALHPSRIPLQIWPDASALEEDGYLGSSR 243
P VG D + D SPR P+ P A+E+
Sbjct: 122 PPCEGAVGYDDDYYEASMMVKVYKMDHMSSPRP------PIDFHPLCLAIEDTEKDSGQN 175

Query: 244 KVLDGGSSLWNGRIEYWQKLIADKKSDMKSPRGAR-AERSPRLCAEFCPLTEEEEVLVFA 420
++ G N + K + KK AR + P L + +CP+ EE+++ ++
Sbjct: 176 RMPTGRRRAKNRPLSIKSKRLKRKKKGRSRRHKARNVDSGPILMSRYCPIVEEQDIGTYS 235

Query: 421 DNDTKTNDALQDSDLI--SPRAMSLRSVSFHNRKQRYLDGCEHRMPASETTGKNNAN 585
+ +++ + Q S+ I + + S + + Y + + + T KN+ N
Sbjct: 236 EYNSEYEELDQRSEGIRENTNTKNYTSTKNYTNTKNYTNTKNYTNTKNYTNTKNDTN 292


>tr|Q9T0Z9|Q9T0Z9_9CAUD Tail fiber protein OS=Yersinia phage
phiYeO3-12 PE=4 SV=1
Length = 645

Score = 33.9 bits (76), Expect = 8.0
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 14/176 (7%)
Frame = +1

Query: 136 HDFNFSP-RALHPSRIPLQIWPDASALEEDGYLGS-SRKVL------DGGSSLWNGRIEY 291
+D N S + LH + + D + DG L + R+++ D G ++ G+I+
Sbjct: 97 YDLNISQVQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNVADAQDVGDAINLGQIQR 156

Query: 292 WQKLI------ADKKSDMKSPRGARAERSPRLCAEFCPLTEEEEVLVFADNDTKTNDALQ 453
W A +++D + R A S A + L T+D +
Sbjct: 157 WNDSALNSANRAKQEADRATARANDANNSANASASSASSSAGSAELA---KRWATSDTVV 213

Query: 454 DSDLISPRAMSLRSVSFHNRKQRYLDGCEHRMPASETTGKNNANGGSPPFSLADMS 621
+SDL S R +L S+ + N + D R SET K + G + + A +S
Sbjct: 214 ESDLESSRTYALHSMLYRNETKDSAD----RAAVSETNAKASEGGAANSAAAAKVS 265


>tr|Q4DLR6|Q4DLR6_TRYCR Putative uncharacterized protein (Fragment)
OS=Trypanosoma cruzi GN=Tc00.1047053509153.139 PE=4 SV=1
Length = 678

Score = 33.9 bits (76), Expect = 8.0
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1

Query: 247 VLDGGSSLWNGRIEYWQKLIADKKSDMKSPRGARAERSPRLCAEFCPLTEEEEVLVFADN 426
V+DG +L E W + + DKK SPRG + + S + A+ PL L F D
Sbjct: 583 VVDGRDAL-----EKWLEDVDDKKEKSPSPRGRQLKPSKDVTADVVPLPRASSPLKFMDP 637

Query: 427 D 429
D
Sbjct: 638 D 638