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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950379
Clone id TST38A01NGRL0008_I01
Library
Length 480
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_I01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
GAGAGAGAGAGAAAGAGATGGCAACAAGGAGAAGAACAATGCTCTGCTCGACGGTGCAGC
TGCTTTCAGAAGGGAAGTCAAGTGCAGGTTGTAGGCGGCATGCAGCTAGTACTGTTGCAG
CAGCTTATGAGAGTGGGGCATGGCGTCCAAAAGCAGCAGCAGCAGAGCCCCCATTGAGTA
GTAGGCGATCGCTGCATCAATTATATTCGCCATGGACGACGCTATTGATGCGAGGAATGT
CATGCTGCGCAGGCCTGGGATCCCCTCCCCCTCGAGAGATTGTGGTGGAGTACAGTAGCC
TTGAAGGGGATCATGACTACACGGATGAGTTCATCAAGCTTGCGGACGCCATCAAGGACG
CCTATTTTTTTTTTTCCCCCCCCTGGAAACCCGGACACGCTACAAAAAAAAAAAGGGGGG
GTTGAGATAACATCCGGGGACTTGATTCTCTTTTCCAAACTGAAGGCATGAACCATCACG
■■Homology search results ■■ -
sp_hit_id Q8N5Z5
Definition sp|Q8N5Z5|KCD17_HUMAN BTB/POZ domain-containing protein KCTD17 OS=Homo sapiens
Align length 35
Score (bit) 31.2
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950379|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_I01, 5'
         (480 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8N5Z5|KCD17_HUMAN BTB/POZ domain-containing protein KCTD17 O...    31   2.6  
sp|Q9KBE5|HUTU_BACHD Urocanate hydratase OS=Bacillus halodurans ...    31   2.6  
sp|A5D7F6|MAML2_BOVIN Mastermind-like protein 2 OS=Bos taurus GN...    30   4.3  
sp|Q8BIQ3|ZNF2_MOUSE Zinc finger protein 2 OS=Mus musculus GN=Zn...    30   5.6  
sp|O35261|E2F3_MOUSE Transcription factor E2F3 OS=Mus musculus G...    30   5.6  
sp|Q836V1|SYI_ENTFA Isoleucyl-tRNA synthetase OS=Enterococcus fa...    30   7.4  
sp|Q0IP28|LAC25_ORYSJ Laccase-25 OS=Oryza sativa subsp. japonica...    29   9.6  
sp|Q00393|FRHG_METVO Coenzyme F420 hydrogenase subunit gamma OS=...    29   9.6  

>sp|Q8N5Z5|KCD17_HUMAN BTB/POZ domain-containing protein KCTD17
           OS=Homo sapiens GN=KCTD17 PE=1 SV=3
          Length = 321

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 360 RP*WRPQA**THPCSHDPLQGYCTPPQSLEGEGIP 256
           RP  RPQ+   HPC + P    C  P  L+G G+P
Sbjct: 288 RPLARPQS--CHPCCYKPEAPGCEAPDHLQGLGVP 320


>sp|Q9KBE5|HUTU_BACHD Urocanate hydratase OS=Bacillus halodurans
           GN=hutU PE=3 SV=1
          Length = 559

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 318 SHDPLQGYCTPPQSLEG-EGIPGLRSMTFLASIASSMANIIDAAIAYYSMGA 166
           +HDPL GY     SLEG E +       ++A    SM   ++A +A+   GA
Sbjct: 264 AHDPLNGYIPEGHSLEGAELLRKENPQRYMALAKQSMKKHVEAMLAFQRRGA 315


>sp|A5D7F6|MAML2_BOVIN Mastermind-like protein 2 OS=Bos taurus
           GN=MAML2 PE=2 SV=1
          Length = 1128

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 48  STVQLLSEGKSSAGCRRHAASTVAAAYESGAWRPKAAAAEPPLSSR 185
           ST+QLLS  +   G R+    T A A  + A  P  A A PP +S+
Sbjct: 72  STLQLLSLVQHGQGARKAGKHTKATASTATATAPPPAPAAPPTASQ 117


>sp|Q8BIQ3|ZNF2_MOUSE Zinc finger protein 2 OS=Mus musculus GN=Znf2
           PE=2 SV=1
          Length = 427

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 75  KSSAGCRRHAASTVAAAYESGAWRPKAAAAEPPLSSRRSLHQLYSP 212
           K S+ C +    T+    E     PKA   + PLS  + LHQ+ +P
Sbjct: 113 KQSSLCPKREIQTLTGGPEPEKESPKARTCKKPLSLDKGLHQMSAP 158


>sp|O35261|E2F3_MOUSE Transcription factor E2F3 OS=Mus musculus
           GN=E2f3 PE=1 SV=2
          Length = 457

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 26/95 (27%), Positives = 39/95 (41%)
 Frame = +3

Query: 54  VQLLSEGKSSAGCRRHAASTVAAAYESGAWRPKAAAAEPPLSSRRSLHQLYSPWTTLLMR 233
           +Q+L+   S+  C   A S  + A  +G   P     EP  SS  +  Q  S    LL +
Sbjct: 54  IQILTTNPSTTSC---ATSLQSGALTAGPLLPSVPGTEPAASSLYTTPQGPSSRVGLLQQ 110

Query: 234 GMSCCAGLGSPPPREIVVEYSSLEGDHDYTDEFIK 338
             +   G G  PP +  +E    E  H Y  + +K
Sbjct: 111 PPAPGRGGGGGPPAKRRLELG--ESGHQYLSDGLK 143


>sp|Q836V1|SYI_ENTFA Isoleucyl-tRNA synthetase OS=Enterococcus
           faecalis GN=ileS PE=3 SV=1
          Length = 926

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 23/70 (32%), Positives = 35/70 (50%)
 Frame = -2

Query: 470 HAFSLEKRIKSPDVISTPPFFFCSVSGFPGGGKKKIGVLDGVRKLDELIRVVMIPFKATV 291
           H++  + R K P +    P +F S+S F      +  +LD V K+D L     IP+  T 
Sbjct: 390 HSYPHDWRTKKPVIYRATPQWFASISKF------RQDILDEVEKVDWL-----IPWGKTR 438

Query: 290 LHHNLSRGRG 261
           L +N+ R RG
Sbjct: 439 L-YNMIRDRG 447


>sp|Q0IP28|LAC25_ORYSJ Laccase-25 OS=Oryza sativa subsp. japonica
           GN=LAC25 PE=2 SV=1
          Length = 577

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 141 WRPKAAAAEPPLSSRRSLHQLYSPWTTLLMRG 236
           WRP      PP++   + H+ +S  T LL  G
Sbjct: 320 WRPPVLPRRPPVNDTATAHRFFSGMTALLRHG 351


>sp|Q00393|FRHG_METVO Coenzyme F420 hydrogenase subunit gamma
           OS=Methanococcus voltae GN=frhG PE=3 SV=1
          Length = 243

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 258 GSPPPREIVVEY--SSLEGDHDYTDEFIKLADAIKDA 362
           G PP  E +V+   ++LEGD +Y + F ++A   KDA
Sbjct: 140 GCPPSTESIVKLLTAALEGDMEYLEPFAEIAKYGKDA 176
tr_hit_id A9TBY3
Definition tr|A9TBY3|A9TBY3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 65
Score (bit) 57.0
E-value 7.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950379|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_I01, 5'
         (480 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TBY3|A9TBY3_PHYPA Predicted protein OS=Physcomitrella paten...    57   7e-08
tr|Q7N7T3|Q7N7T3_PHOLL Similar to transposase OS=Photorhabdus lu...    35   1.4  
tr|Q607K1|Q607K1_METCA Putative uncharacterized protein OS=Methy...    35   1.9  
tr|A9FD54|A9FD54_9RHOB DNA mismatch repair protein OS=Phaeobacte...    35   2.4  
tr|Q5GXK4|Q5GXK4_XANOR Putative uncharacterized protein OS=Xanth...    33   5.4  
tr|Q2P0P3|Q2P0P3_XANOM Putative uncharacterized protein XOO3129 ...    33   5.4  
tr|B2SWF8|B2SWF8_XANOP Putative uncharacterized protein OS=Xanth...    33   5.4  
tr|A4R5V0|A4R5V0_MAGGR Putative uncharacterized protein OS=Magna...    33   5.4  
tr|B6QAY4|B6QAY4_PENMA Regulator of secondary metabolism LaeA OS...    33   7.0  
tr|B0W069|B0W069_CULQU T-box protein H15 OS=Culex quinquefasciat...    33   7.0  
tr|B2AIQ9|B2AIQ9_CUPTR Putative uncharacterized protein OS=Cupri...    33   9.2  
tr|B0U9S7|B0U9S7_METS4 Amidohydrolase OS=Methylobacterium sp. (s...    33   9.2  
tr|Q9FFJ4|Q9FFJ4_ARATH Emb|CAB81597.1 OS=Arabidopsis thaliana GN...    33   9.2  
tr|Q6ER80|Q6ER80_ORYSJ Putative uncharacterized protein OSJNBa00...    33   9.2  
tr|Q5XV51|Q5XV51_ARATH Putative uncharacterized protein OS=Arabi...    33   9.2  
tr|A8J2C4|A8J2C4_CHLRE Component of oligomeric golgi complex 4 O...    33   9.2  

>tr|A9TBY3|A9TBY3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169225 PE=4 SV=1
          Length = 315

 Score = 57.0 bits (136), Expect(2) = 7e-08
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
 Frame = +3

Query: 183 RRSLHQLYSP---WTTLLM-RGMSCCAGLGSPPPREIVVEYSSLEGDHDYTDEFIKLADA 350
           R S +  + P   W  ++    MSCCA LG+PPPREI+VEY     D +YTD FI++AD 
Sbjct: 191 RSSTNSTFEPGFHWRKMIQAHHMSCCANLGNPPPREIIVEYCE---DSEYTDYFIEIADK 247

Query: 351 IKDAY 365
           ++ A+
Sbjct: 248 VEAAH 252



 Score = 23.9 bits (50), Expect(2) = 7e-08
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 388 NPDTLQKKKGGVEITSGDLILFSKLK 465
           +P+ ++ +KG  EI     +++SKLK
Sbjct: 260 SPNNMEARKGSFEIICDGHVIWSKLK 285


>tr|Q7N7T3|Q7N7T3_PHOLL Similar to transposase OS=Photorhabdus
           luminescens subsp. laumondii GN=plu1024 PE=4 SV=1
          Length = 275

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 24/68 (35%), Positives = 29/68 (42%)
 Frame = +3

Query: 6   REKEMATRRRTMLCSTVQLLSEGKSSAGCRRHAASTVAAAYESGAWRPKAAAAEPPLSSR 185
           R K+  T R  +     +  +EGK SAG R  AA   A     G WR     AE  L SR
Sbjct: 21  RVKKPDTERIRLKSLVREAFNEGKGSAGARTIAAMVTAKGIPLGRWRAGKLMAELGLVSR 80

Query: 186 RSLHQLYS 209
           +     YS
Sbjct: 81  QQPKHRYS 88


>tr|Q607K1|Q607K1_METCA Putative uncharacterized protein
           OS=Methylococcus capsulatus GN=MCA1758 PE=4 SV=1
          Length = 343

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
 Frame = +3

Query: 90  CRRHAAST-----VAAAYESGAWRPKAAAAEPPLSSRRSLHQLYSPWTTLLMRGM---SC 245
           C RH A T     V A   S    P  A  EPP+S+ R      +P   LL   +   S 
Sbjct: 41  CLRHRAGTPGVPAVPAGGRSAGRPPHPADPEPPVSNGRRFSGAMTPLARLLPCMLWLCSA 100

Query: 246 CAGLGSPPPREIVVE-----YSSLEGDH 314
           CAG G+P P  +  E     Y   EG H
Sbjct: 101 CAGPGTPSPAPVPGEPHASIYIVNEGKH 128


>tr|A9FD54|A9FD54_9RHOB DNA mismatch repair protein OS=Phaeobacter
           gallaeciensis 2.10 GN=mutL PE=4 SV=1
          Length = 650

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
 Frame = +3

Query: 54  VQLLSEGKSSAGCRRHAASTVAAAYESGAWRPKAAAAEPPLSSRRSLHQLYSPWT----- 218
           V  L  G + AG   H AS+  A    GA RP+  A++P       ++Q+  P       
Sbjct: 339 VSALRHGLAEAG---HRASSTVAGATLGAMRPEPMASQPGADGAPRIYQMDRPSLGARSL 395

Query: 219 --TLLMRGMSCCAGLGSPPP 272
                  G SC AG   PPP
Sbjct: 396 SYAAQAPGQSCIAGGDMPPP 415


>tr|Q5GXK4|Q5GXK4_XANOR Putative uncharacterized protein
            OS=Xanthomonas oryzae pv. oryzae GN=XOO3313 PE=4 SV=1
          Length = 1254

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/83 (31%), Positives = 37/83 (44%)
 Frame = -3

Query: 286  TTISRGGGDPRPAQHDIPRINSVVHGEYN*CSDRLLLNGGSAAAAFGRHAPLS*AAATVL 107
            TT S     P P Q  IP+ ++V   + +  +DRLL+ GG       R  P   A A  L
Sbjct: 891  TTSSDADMPPLPGQPAIPKKDAVPLQQVDVQADRLLMIGGVFPQTRLRLRPTRDAVAVTL 950

Query: 106  AACRLQPALDFPSESSCTVEQSI 38
            A   L   L  P+    TV+ ++
Sbjct: 951  AGPSLAGQLTVPTADGATVQGTL 973


>tr|Q2P0P3|Q2P0P3_XANOM Putative uncharacterized protein XOO3129
            OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018)
            GN=XOO3129 PE=4 SV=1
          Length = 1306

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/83 (31%), Positives = 37/83 (44%)
 Frame = -3

Query: 286  TTISRGGGDPRPAQHDIPRINSVVHGEYN*CSDRLLLNGGSAAAAFGRHAPLS*AAATVL 107
            TT S     P P Q  IP+ ++V   + +  +DRLL+ GG       R  P   A A  L
Sbjct: 891  TTSSDADMPPLPGQPAIPKKDAVPLQQVDVQADRLLMIGGVFPQTRLRLRPTRDAVAVTL 950

Query: 106  AACRLQPALDFPSESSCTVEQSI 38
            A   L   L  P+    TV+ ++
Sbjct: 951  AGPSLAGQLTVPTADGATVQGTL 973


>tr|B2SWF8|B2SWF8_XANOP Putative uncharacterized protein
            OS=Xanthomonas oryzae pv. oryzae (strain PXO99A)
            GN=PXO_01889 PE=4 SV=1
          Length = 1306

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 26/83 (31%), Positives = 37/83 (44%)
 Frame = -3

Query: 286  TTISRGGGDPRPAQHDIPRINSVVHGEYN*CSDRLLLNGGSAAAAFGRHAPLS*AAATVL 107
            TT S     P P Q  IP+ ++V   + +  +DRLL+ GG       R  P   A A  L
Sbjct: 891  TTSSDADMPPLPGQPAIPKKDAVPLQQVDVQADRLLMIGGVFPQTRLRLRPTRDAVAVTL 950

Query: 106  AACRLQPALDFPSESSCTVEQSI 38
            A   L   L  P+    TV+ ++
Sbjct: 951  AGPSLAGQLTVPTADGATVQGTL 973


>tr|A4R5V0|A4R5V0_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_10431 PE=4 SV=1
          Length = 793

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
 Frame = -3

Query: 259 PRPAQHDIPRINSVVHG--------EYN*CSDRLLLNGGSAAAAFGR--HAPLS*AAATV 110
           P P  H  P++N++  G        EYN C + L   G    +AFGR   AP+   AAT 
Sbjct: 414 PTPNGHCGPKVNTICKGSVFGDCCSEYNYCGNGLDYCGAGCQSAFGRCGDAPVEPKAATT 473

Query: 109 LAACRLQPALDFPSESSCT 53
            ++ +       P  SS T
Sbjct: 474 SSSSQPPRVATSPVSSSST 492


>tr|B6QAY4|B6QAY4_PENMA Regulator of secondary metabolism LaeA
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_074350 PE=4
           SV=1
          Length = 371

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = -1

Query: 327 HPCSHDPLQGYCTPPQSLEGEGIPGLRSMTFLASIASSMANIIDAAIAYYSMGAXXXXXL 148
           HP    PLQG  T   +    G P    + + +  AS +   +DA   +    A      
Sbjct: 7   HPAQ--PLQGTATTTITTTTNGSPQTSQLVYSSPDASRIGQNVDAHNPHAGESARSNNAR 64

Query: 147 DAMPHSHKLLQQY*LH 100
           D MP  +KL +QY  H
Sbjct: 65  DLMPSQYKLPEQYPRH 80


>tr|B0W069|B0W069_CULQU T-box protein H15 OS=Culex quinquefasciatus
           GN=CpipJ_CPIJ000433 PE=4 SV=1
          Length = 346

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +3

Query: 102 AASTVAAAYESGAWRPKAAAAEPPLSSRRSLHQLYSPWTTLLMRGMSCCAGLGSPPPREI 281
           AA   AAA  S A    ++A  PP S   S+H      T     G    +G GSP P E+
Sbjct: 256 AAFLQAAAAASSAASSSSSATPPPTSGASSVHLPPGAATVSTPPGSGTSSGSGSPSPSEL 315

Query: 282 VVEYSS 299
             ++ S
Sbjct: 316 RAKHMS 321