DK950302
Clone id TST38A01NGRL0008_E19
Library
Length 688
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_E19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GTGGATTCCCTCTGCCGCTGCTGAGCCTCCCCTTGTGGCATCCTGGATATGTCCTGTGAC
GCTCCCGTCCTGTGACACTCCTCCACGGTCAGCTATTGAATTGGCTTCCTGGATACCCTT
GCCTCGATCACGATCACGATCTCCAATGAATGTGGACTGCTCCTGCTGCTCCAGAAAGAA
TGATCCTCTGCAGCTACTTGATCTGGACTCTTTGATACTTGATGTAGCAGTGTAGGCGTG
TGGCTCTGATACCAATGTGATGAGCGGAAGCGATTGTCTGCCCAGAAACCTTCTACCTGC
AGATGAGTATCAAAACGCAAGAGAAGAGAGAGACTGTTGAAGTTGCTTTTCTTTATTATT
GCTGTATGTACATGTGTTACAGGGGCAACCTAAACTACATGCTGTGATGGCGATGGATGA
TGCTGCATGTTATGTGTGTGCAAGAAGCTAATGCTAATGCATGACTGTTGGCCGTAAGGA
CCCTGCTGTGACCATCTGCCCTGCCCTGTAGCAATTGCAGAAGATGGATAAAATGAACGC
CTGCTGTCCTTTAAATATTCCTCCATATGGCAATCTGTACGACAGCTGAATTTTGGATAA
TTCATTTAATTGGCGTTTTTCTGACTGCCTGCTGGCTGGCCAAAAATAGCATATTTTAAA
CATGCTCTTAATGCTGAATTAGTTGCTG
■■Homology search results ■■ -
sp_hit_id Q8VE18
Definition sp|Q8VE18|CQ071_MOUSE UPF0487 protein C17orf71 homolog OS=Mus musculus
Align length 42
Score (bit) 31.2
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950302|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_E19, 5'
(673 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8VE18|CQ071_MOUSE UPF0487 protein C17orf71 homolog OS=Mus mu... 31 5.2
sp|P10388|GLT5_WHEAT Glutenin, high molecular weight subunit DX5... 30 8.8
sp|P08489|GLT4_WHEAT Glutenin, high molecular weight subunit PW2... 30 8.8
sp|Q9LN63|BZR2_ARATH Protein BRASSINAZOLE-RESISTANT 2 OS=Arabido... 30 8.9

>sp|Q8VE18|CQ071_MOUSE UPF0487 protein C17orf71 homolog OS=Mus
musculus PE=2 SV=1
Length = 991

Score = 31.2 bits (69), Expect = 5.2
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2

Query: 129 DRGKGIQ-EANSIADRGGVSQDGSVTGHIQDATRGGSAAAEG 7
D G GI+ +A S+ + GG G+ G D+ RGG A AEG
Sbjct: 87 DPGTGIKTKAVSVGEAGGAGDPGAAAG---DSLRGGMATAEG 125


>sp|P10388|GLT5_WHEAT Glutenin, high molecular weight subunit DX5
OS=Triticum aestivum GN=GLU-1D-1D PE=3 SV=4
Length = 839

Score = 30.4 bits (67), Expect = 8.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3

Query: 542 RRSFYPSSAIATGQGRWSQQGPYGQQSCISISFLH 438
++ +YP+S TGQG+ S QG G S +S H
Sbjct: 772 QQGYYPTSLQQTGQGQQSGQGQQGYYSSYHVSVEH 806


>sp|P08489|GLT4_WHEAT Glutenin, high molecular weight subunit PW212
OS=Triticum aestivum PE=3 SV=1
Length = 838

Score = 30.4 bits (67), Expect = 8.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3

Query: 542 RRSFYPSSAIATGQGRWSQQGPYGQQSCISISFLH 438
++ +YP+S TGQG+ S QG G S +S H
Sbjct: 771 QQGYYPTSLQQTGQGQQSGQGQQGYYSSYHVSVEH 805


>sp|Q9LN63|BZR2_ARATH Protein BRASSINAZOLE-RESISTANT 2
OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1
Length = 335

Score = 30.4 bits (67), Expect = 8.9
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +2

Query: 11 SAAAEPPLVASWICPVTLPSCDTPPRSAIELASWIPLPRSRSRSPMN 151
SA A P + P T+P CD S ++ WI + + P +
Sbjct: 219 SAPASPTHHRQFHAPATIPECDESDSSTVDSGHWISFQKFAQQQPFS 265


tr_hit_id B3T1G4
Definition tr|B3T1G4|B3T1G4_9ZZZZ Putative NHL repeat protein OS=uncultured marine microorganism HF4000_009L19
Align length 58
Score (bit) 36.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950302|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_E19, 5'
(673 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3T1G4|B3T1G4_9ZZZZ Putative NHL repeat protein OS=uncultured... 37 1.5

>tr|B3T1G4|B3T1G4_9ZZZZ Putative NHL repeat protein OS=uncultured
marine microorganism HF4000_009L19
GN=ALOHA_HF4000009L19ctg1g20 PE=4 SV=1
Length = 343

Score = 36.6 bits (83), Expect = 1.5
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -2

Query: 165 QEQSTFIGD---RDRDRGKGIQEANSIADRGGVSQDGSVTGHIQD-ATRGGSAAAEGI 4
Q + ++ D RD + G G R G + DG+VTG I D A RGGS+AAEG+
Sbjct: 262 QHDTLYVADSESRDNEGGYGHNPDVRRGIRIGSAVDGTVTGFIADPAERGGSSAAEGV 319