DK950254 |
Clone id |
TST38A01NGRL0008_C18 |
Library |
TST38 |
Length |
627 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_C18. 5' end sequence. |
Accession |
DK950254 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GTAGCACAAGGCTATATAAAGCAGTAACCAGCTCGCGAGCTGTAATGACAGGGAGGCGGG ACATTTAGAGTGAATTTAGGGCTGCTTTAGTTCTTCGTTTACTGTGTGAAGGGATCATGG GGAAGCGGAAGCTAGCACAGCTCTCAGATTCTGATGAAGAAGAAGATGAGAAAGCCTCCG TACCCCCAAAGGATAGTGGCGAAGGTGGCAGCGATGAAGAAAACTCTGCTGACCCAAAGC CGTTGGGTGAAGTCATCAAACGTGTGGGCAGAGGTAAATTAGAAAAACGGCACTATCAAG CTTTTGAACTTGATGGGAATCGCTATGAAATTGAAGATCCGGTGCTTGTGACTCCTGAAG AAAGAAATCAAAAGCCTTATGTGGCCATTATCAAAGAGATAAAGCAATCAAAAGATGGGG GCATTGCAGTTACTGGTCAGTGGTTTTACCGCCCAGAGGAGGCGGACAAAAAGTCAGGAG GTAGCTGGGTTTCCTCAGATTCTCGTGACCTGTTTTATAGCTTTCATCGTGATGAGGTTG CTGCAGAATCTGTGATGCACAAGTGCGTTGTTCACTTTATACCTGCTCACAAACAGGCGC CACTCCGCTCAAAGCACCCTGGATTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q90941 |
Definition |
sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus |
Align length |
137 |
Score (bit) |
52.8 |
E-value |
1.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QIW8 |
Definition |
tr|A7QIW8|A7QIW8_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
142 |
Score (bit) |
206.0 |
E-value |
1.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950254|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_C18, 5' (627 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QIW8|A7QIW8_VITVI Chromosome chr2 scaffold_105, whole genom... 206 1e-51 tr|A9TL85|A9TL85_PHYPA Predicted protein OS=Physcomitrella paten... 202 1e-50 tr|Q5QLH2|Q5QLH2_ORYSJ cDNA clone:J033121F02, full insert sequen... 196 7e-49 tr|A2WQW5|A2WQW5_ORYSI Putative uncharacterized protein OS=Oryza... 196 7e-49 tr|B6U2A8|B6U2A8_MAIZE BAH domain containing protein OS=Zea mays... 193 8e-48 tr|Q8RXT5|Q8RXT5_ARATH Putative uncharacterized protein At4g1156... 192 2e-47 tr|A9SVW6|A9SVW6_PHYPA Predicted protein OS=Physcomitrella paten... 180 7e-44 tr|A2ZTX4|A2ZTX4_ORYSJ Putative uncharacterized protein OS=Oryza... 156 1e-36 tr|Q3E7N9|Q3E7N9_ARATH Uncharacterized protein At2g25120.1 OS=Ar... 154 5e-36 tr|Q9LDW8|Q9LDW8_ARATH Putative uncharacterized protein AT4g1156... 152 2e-35 tr|O65464|O65464_ARATH Putative uncharacterized protein F21P8.10... 143 1e-32 tr|Q9LXW1|Q9LXW1_ARATH Putative uncharacterized protein T15B3_13... 134 6e-30 tr|A5B9N7|A5B9N7_VITVI Putative uncharacterized protein OS=Vitis... 84 9e-15 tr|Q56R07|Q56R07_SOLLC Putative BAH domain-containing protein OS... 70 1e-10 tr|Q53J12|Q53J12_SOLLC BAH domain-containing protein, putative O... 70 1e-10 tr|B6TPH2|B6TPH2_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 67 1e-09 tr|Q9SU69|Q9SU69_ARATH Putative uncharacterized protein T17F15.7... 62 2e-08 tr|Q9SU68|Q9SU68_ARATH Putative uncharacterized protein T17F15.8... 62 2e-08 tr|B6TEF9|B6TEF9_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 62 2e-08 tr|B4FLD4|B4FLD4_MAIZE Putative uncharacterized protein OS=Zea m... 62 2e-08 tr|A7PD53|A7PD53_VITVI Chromosome chr17 scaffold_12, whole genom... 62 2e-08 tr|Q7EYS4|Q7EYS4_ORYSJ Os08g0421900 protein OS=Oryza sativa subs... 60 8e-08 tr|B8BAV1|B8BAV1_ORYSI Putative uncharacterized protein OS=Oryza... 60 8e-08 tr|A3BT84|A3BT84_ORYSJ Putative uncharacterized protein OS=Oryza... 60 8e-08 tr|A5AF28|A5AF28_VITVI Putative uncharacterized protein OS=Vitis... 59 2e-07 tr|Q308A2|Q308A2_SOLTU Putative uncharacterized protein OS=Solan... 58 4e-07 tr|Q6Z7R3|Q6Z7R3_ORYSJ Os02g0742000 protein OS=Oryza sativa subs... 58 5e-07 tr|A9P1G4|A9P1G4_PICSI Putative uncharacterized protein OS=Picea... 58 5e-07 tr|A5AQF9|A5AQF9_VITVI Putative uncharacterized protein OS=Vitis... 57 7e-07 tr|B8AIE6|B8AIE6_ORYSI Putative uncharacterized protein OS=Oryza... 57 1e-06
>tr|A7QIW8|A7QIW8_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000421001 PE=4 SV=1 Length = 595
Score = 206 bits (523), Expect = 1e-51 Identities = 90/142 (63%), Positives = 114/142 (80%) Frame = +3
Query: 201 EGGSDEENSADPKPLGEVIKRVGRGKLEKRHYQAFELDGNRYEIEDPVLVTPEERNQKPY 380 + G +E D KP+G+ ++ G+G+ + HY+AFE DGNRY++EDPVL+ PE+ QKPY Sbjct: 56 QSGDEEAPQEDAKPIGDAVRVSGKGRGRRSHYEAFEFDGNRYDLEDPVLLVPEDEKQKPY 115
Query: 381 VAIIKEIKQSKDGGIAVTGQWFYRPEEADKKSGGSWVSSDSRDLFYSFHRDEVAAESVMH 560 VAIIK+I Q+++G I VTGQWFYRPEEA+KK GGSW SSD+R+LFYSFHRDEV AESVMH Sbjct: 116 VAIIKDITQTREGSIMVTGQWFYRPEEAEKKGGGSWKSSDTRELFYSFHRDEVPAESVMH 175
Query: 561 KCVVHFIPAHKQAPLRSKHPGF 626 KCVVHF+P +KQ P R + PGF Sbjct: 176 KCVVHFVPLNKQLPNRKQFPGF 197
>tr|A9TL85|A9TL85_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170692 PE=4 SV=1 Length = 937
Score = 202 bits (515), Expect = 1e-50 Identities = 98/145 (67%), Positives = 116/145 (80%), Gaps = 4/145 (2%) Frame = +3
Query: 204 GGSDEENSADPKPLGEVIKRVGRGKLE----KRHYQAFELDGNRYEIEDPVLVTPEERNQ 371 G SDEE + K +GE+ K+ G GKL+ ++ YQAFE+DGNRYE++DPVLVTPE +Q Sbjct: 291 GASDEEFVVEVKVVGEITKKTG-GKLKGDKGRKTYQAFEVDGNRYEVDDPVLVTPERPSQ 349
Query: 372 KPYVAIIKEIKQSKDGGIAVTGQWFYRPEEADKKSGGSWVSSDSRDLFYSFHRDEVAAES 551 KPYVAIIK+I Q+KDG + V GQWFYRPEEA+KK GG+W SSDSR+LFYSFH DEV AES Sbjct: 350 KPYVAIIKKIMQAKDGTVQVEGQWFYRPEEAEKKGGGTWASSDSRELFYSFHIDEVPAES 409
Query: 552 VMHKCVVHFIPAHKQAPLRSKHPGF 626 VMHKC VHFIP +KQ P R KHPGF Sbjct: 410 VMHKCQVHFIPPNKQLPQRHKHPGF 434
>tr|Q5QLH2|Q5QLH2_ORYSJ cDNA clone:J033121F02, full insert sequence OS=Oryza sativa subsp. japonica GN=B1074C08.29 PE=2 SV=1 Length = 644
Score = 196 bits (499), Expect = 7e-49 Identities = 86/137 (62%), Positives = 113/137 (82%) Frame = +3
Query: 216 EENSADPKPLGEVIKRVGRGKLEKRHYQAFELDGNRYEIEDPVLVTPEERNQKPYVAIIK 395 EE + + P+GE +K GRGK +++HY +FE +GN +E+EDPVL+TPE+ +KPYVAI+K Sbjct: 131 EEENTEAVPIGEPVKITGRGKKQRKHYTSFEYEGNTFELEDPVLLTPEDSKEKPYVAILK 190
Query: 396 EIKQSKDGGIAVTGQWFYRPEEADKKSGGSWVSSDSRDLFYSFHRDEVAAESVMHKCVVH 575 +I ++ +G ++VTGQWFYRPEEADKK GGSW +SD+R+LFYSFH D+V AESVMHKCVVH Sbjct: 191 DITET-EGSLSVTGQWFYRPEEADKKGGGSWKASDTRELFYSFHIDDVPAESVMHKCVVH 249
Query: 576 FIPAHKQAPLRSKHPGF 626 FIP HK+ P R +HPGF Sbjct: 250 FIPQHKKIPSRKEHPGF 266
>tr|A2WQW5|A2WQW5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02248 PE=4 SV=1 Length = 625
Score = 196 bits (499), Expect = 7e-49 Identities = 86/137 (62%), Positives = 113/137 (82%) Frame = +3
Query: 216 EENSADPKPLGEVIKRVGRGKLEKRHYQAFELDGNRYEIEDPVLVTPEERNQKPYVAIIK 395 EE + + P+GE +K GRGK +++HY +FE +GN +E+EDPVL+TPE+ +KPYVAI+K Sbjct: 131 EEENTEAVPIGEPVKITGRGKKQRKHYTSFEYEGNTFELEDPVLLTPEDSKEKPYVAILK 190
Query: 396 EIKQSKDGGIAVTGQWFYRPEEADKKSGGSWVSSDSRDLFYSFHRDEVAAESVMHKCVVH 575 +I ++ +G ++VTGQWFYRPEEADKK GGSW +SD+R+LFYSFH D+V AESVMHKCVVH Sbjct: 191 DITET-EGSLSVTGQWFYRPEEADKKGGGSWKASDTRELFYSFHIDDVPAESVMHKCVVH 249
Query: 576 FIPAHKQAPLRSKHPGF 626 FIP HK+ P R +HPGF Sbjct: 250 FIPQHKKIPSRKEHPGF 266
>tr|B6U2A8|B6U2A8_MAIZE BAH domain containing protein OS=Zea mays PE=2 SV=1 Length = 638
Score = 193 bits (490), Expect = 8e-48 Identities = 87/138 (63%), Positives = 110/138 (79%) Frame = +3
Query: 213 DEENSADPKPLGEVIKRVGRGKLEKRHYQAFELDGNRYEIEDPVLVTPEERNQKPYVAII 392 +E A P +G+ +K G+GK +K+HY +FE +GN +E+EDPVL+TPE+ NQKPYVAI+ Sbjct: 126 EEITEAVPVAVGDPVKITGKGKKQKKHYASFEYEGNSFELEDPVLLTPEDSNQKPYVAIL 185
Query: 393 KEIKQSKDGGIAVTGQWFYRPEEADKKSGGSWVSSDSRDLFYSFHRDEVAAESVMHKCVV 572 K+I ++ DG + VTGQWFYRPEEADKK GG WV+ D+R+LFYSFH D+V AESVMHKCVV Sbjct: 186 KDITET-DGSLYVTGQWFYRPEEADKKEGGFWVARDTRELFYSFHTDDVPAESVMHKCVV 244
Query: 573 HFIPAHKQAPLRSKHPGF 626 HFIP KQ P R +HPGF Sbjct: 245 HFIPQQKQIPSRKQHPGF 262
>tr|Q8RXT5|Q8RXT5_ARATH Putative uncharacterized protein At4g11560 OS=Arabidopsis thaliana GN=At4g11560 PE=2 SV=1 Length = 587
Score = 192 bits (487), Expect = 2e-47 Identities = 84/148 (56%), Positives = 112/148 (75%) Frame = +3
Query: 183 PPKDSGEGGSDEENSADPKPLGEVIKRVGRGKLEKRHYQAFELDGNRYEIEDPVLVTPEE 362 P + E +EE D P+G+ + G+GK ++ H+ F DGN Y++E PVL+ PE+ Sbjct: 84 PEAEEEEDEEEEEKPDDACPVGDSVNVTGKGKGKRTHFNQFAYDGNTYDLEVPVLLVPED 143
Query: 363 RNQKPYVAIIKEIKQSKDGGIAVTGQWFYRPEEADKKSGGSWVSSDSRDLFYSFHRDEVA 542 ++QKPYVAIIK+I Q+KDG + + GQWFYRPEEA+K+ GG+W SSD+R+LFYSFHRDEV Sbjct: 144 KSQKPYVAIIKDITQTKDGSMMILGQWFYRPEEAEKRGGGNWQSSDTRELFYSFHRDEVP 203
Query: 543 AESVMHKCVVHFIPAHKQAPLRSKHPGF 626 AESVMH+CVV+F+PAHKQ P R +PGF Sbjct: 204 AESVMHRCVVYFVPAHKQLPKRKNNPGF 231
>tr|A9SVW6|A9SVW6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188929 PE=4 SV=1 Length = 592
Score = 180 bits (456), Expect = 7e-44 Identities = 83/120 (69%), Positives = 98/120 (81%), Gaps = 2/120 (1%) Frame = +3
Query: 273 GKLEKRH--YQAFELDGNRYEIEDPVLVTPEERNQKPYVAIIKEIKQSKDGGIAVTGQWF 446 GK +K YQAFE+D N YE++D VL+TPE +QKPYVAIIK+I Q+KDG + + GQWF Sbjct: 3 GKADKGRALYQAFEVDDNLYEVDDAVLITPESPSQKPYVAIIKKIMQAKDGTVQIEGQWF 62
Query: 447 YRPEEADKKSGGSWVSSDSRDLFYSFHRDEVAAESVMHKCVVHFIPAHKQAPLRSKHPGF 626 YRPEEADKK GG+W SSDSR+LFYSFH DEV+AESVMHKC VHF+P +KQ P R KHPGF Sbjct: 63 YRPEEADKKGGGTWASSDSRELFYSFHIDEVSAESVMHKCQVHFVPPNKQLPQRHKHPGF 122
>tr|A2ZTX4|A2ZTX4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001996 PE=4 SV=1 Length = 663
Score = 156 bits (394), Expect = 1e-36 Identities = 82/175 (46%), Positives = 107/175 (61%), Gaps = 38/175 (21%) Frame = +3
Query: 216 EENSADPKPLGEVIKRVGRGKLEKR-----------------HYQAFELDGNRYEI---- 332 EE + + P+GE +K GRGK +++ Y F L + + Sbjct: 131 EEENTEAVPIGEPVKITGRGKKQRKLTPPSSTRATPSSSYAASYPPFWLGFLGFLMIFPN 190
Query: 333 -----------------EDPVLVTPEERNQKPYVAIIKEIKQSKDGGIAVTGQWFYRPEE 461 EDPVL+TPE+ +KPYVAI+K+I ++ +G ++VTGQWFYRPEE Sbjct: 191 SDFSFFFCGLMIVVDLQEDPVLLTPEDSKEKPYVAILKDITET-EGSLSVTGQWFYRPEE 249
Query: 462 ADKKSGGSWVSSDSRDLFYSFHRDEVAAESVMHKCVVHFIPAHKQAPLRSKHPGF 626 ADKK GGSW +SD+R+LFYSFH D+V AESVMHKCVVHFIP HK+ P R +HPGF Sbjct: 250 ADKKGGGSWKASDTRELFYSFHIDDVPAESVMHKCVVHFIPQHKKIPSRKEHPGF 304
>tr|Q3E7N9|Q3E7N9_ARATH Uncharacterized protein At2g25120.1 OS=Arabidopsis thaliana GN=At2g25120 PE=4 SV=1 Length = 380
Score = 154 bits (388), Expect = 5e-36 Identities = 73/131 (55%), Positives = 93/131 (70%), Gaps = 1/131 (0%) Frame = +3
Query: 237 KPLGEVIKRVGRGKLEKRHYQAFELDGNRYEIEDPVLVTPEERNQKPYVAIIKEIK-QSK 413 KPLGEV K G+GK +K H++ F GN+Y +ED V + P++ N KPY AIIK+I +K Sbjct: 67 KPLGEVSKVTGKGKKKKSHFKTFTFRGNQYALEDSVQLVPDDPNSKPYCAIIKDIYIPNK 126
Query: 414 DGGIAVTGQWFYRPEEADKKSGGSWVSSDSRDLFYSFHRDEVAAESVMHKCVVHFIPAHK 593 + + + WFYRPE+ DKK G W S DSR+LFYSFHRDEV AESV HKCVV+F+P +K Sbjct: 127 EKYVKLAVHWFYRPEDVDKKHVGKWESKDSRNLFYSFHRDEVFAESVKHKCVVNFVPENK 186
Query: 594 QAPLRSKHPGF 626 Q P R +HP F Sbjct: 187 QIPNRREHPCF 197
>tr|Q9LDW8|Q9LDW8_ARATH Putative uncharacterized protein AT4g11560 OS=Arabidopsis thaliana GN=AT4g11560 PE=4 SV=1 Length = 652
Score = 152 bits (383), Expect = 2e-35 Identities = 68/100 (68%), Positives = 85/100 (85%), Gaps = 2/100 (2%) Frame = +3
Query: 333 EDPVLVTPEERNQKPYVAIIK--EIKQSKDGGIAVTGQWFYRPEEADKKSGGSWVSSDSR 506 E PVL+ PE+++QKPYVAIIK +I Q+KDG + + GQWFYRPEEA+K+ GG+W SSD+R Sbjct: 218 EVPVLLVPEDKSQKPYVAIIKVLDITQTKDGSMMILGQWFYRPEEAEKRGGGNWQSSDTR 277
Query: 507 DLFYSFHRDEVAAESVMHKCVVHFIPAHKQAPLRSKHPGF 626 +LFYSFHRDEV AESVMH+CVV+F+PAHKQ P R +PGF Sbjct: 278 ELFYSFHRDEVPAESVMHRCVVYFVPAHKQLPKRKNNPGF 317
Score = 39.7 bits (91), Expect = 0.15 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3
Query: 183 PPKDSGEGGSDEENSADPKPLGEVIKRVGRGKLEKRHYQAFELDGNRYEI 332 P + E +EE D P+G+ + G+GK ++ H+ F DGN Y++ Sbjct: 84 PEAEEEEDEEEEEKPDDACPVGDSVNVTGKGKGKRTHFNQFAYDGNTYDL 133
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