DK950228 |
Clone id |
TST38A01NGRL0008_B16 |
Library |
TST38 |
Length |
641 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_B16. 5' end sequence. |
Accession |
DK950228 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3061Contig1 |
Sequence |
CGCACTGAAGTGTTGCCATAACCTCAAAACCCCAGATCCAAGCTTCGTCGTCTCCTTCTT TGAAGCTGGGCCAAGAGCTGGGCACACCGTTGTGGTTCTGATCTGTGCAGCGATCAAGTT CTACCATGGGAGCTTCCACATTCGTTATCATTATAATCTTTGTTTTGGACTTGATTGCAT TCGGGCTGGGCATTGGAGCTGAACAGAGGCGTGCTGAAGGAAAGTACGTGACAGATGATC CTTCAGACTACCAGTGGTGTCAATATTCTTCGGACATTGCGACAGGTTTGGCTACTGGAG CTTTGCTGTTCCTTTTGACAAGTCAGGTGTTGGTCCTTGGAGCTACTCGTTGTCTTTGCT GTGGAAACTCCTTGAAACCGGGTGCAGCACGTGCTTTTGCTGTCATCTTCTTCATTCTCA ACTGGTTATCGTTCTTGGTGGCTGAAATTTGTTTCTTGGCGGGTGCAGTGCAGAATGCCA AGCACATTCGTTACTTTTCTAGCATACAGGTGACTAGCAAGCCCACATGCTCTGCTATCC GGAAGGATACTTTTGCTGCTGGTGTAGCATTCACTTTCTTCACGTTTATTTTGAGTGTGG CTTACTACCTTTGCTGCTCAAAAGCACAAGAAGGAGGATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O76011 |
Definition |
sp|O76011|KRT34_HUMAN Keratin, type I cuticular Ha4 OS=Homo sapiens |
Align length |
154 |
Score (bit) |
36.6 |
E-value |
0.11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNH9 |
Definition |
tr|A9NNH9|A9NNH9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
169 |
Score (bit) |
127.0 |
E-value |
6.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950228|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_B16, 5' (641 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNH9|A9NNH9_PICSI Putative uncharacterized protein OS=Picea... 127 6e-28 tr|A7P1I7|A7P1I7_VITVI Chromosome chr19 scaffold_4, whole genome... 122 2e-26 tr|Q9LDK1|Q9LDK1_ARATH Gb|AAF30339.1 (AT3g15480/MJK13_14) (Putat... 116 1e-24 tr|A9NS70|A9NS70_PICSI Putative uncharacterized protein OS=Picea... 115 2e-24 tr|Q9C930|Q9C930_ARATH Putative uncharacterized protein F14G24.1... 115 2e-24 tr|Q6T7D3|Q6T7D3_GOSBA Fiber protein Fb34 OS=Gossypium barbadens... 111 4e-23 tr|B6UFS5|B6UFS5_MAIZE Fiber protein Fb34 OS=Zea mays PE=2 SV=1 109 1e-22 tr|B6T362|B6T362_MAIZE Fiber protein Fb34 OS=Zea mays PE=2 SV=1 109 1e-22 tr|A9P8A6|A9P8A6_POPTR Putative uncharacterized protein OS=Popul... 107 6e-22 tr|A9NLP2|A9NLP2_PICSI Putative uncharacterized protein OS=Picea... 107 8e-22 tr|Q6Z3C2|Q6Z3C2_ORYSJ Os07g0462200 protein OS=Oryza sativa subs... 105 2e-21 tr|Q940M6|Q940M6_ARATH At4g27438 (At4g27438/At4g27438) OS=Arabid... 105 3e-21 tr|A7QYP9|A7QYP9_VITVI Chromosome undetermined scaffold_252, who... 105 3e-21 tr|B6TXE3|B6TXE3_MAIZE Fiber protein Fb34 OS=Zea mays PE=2 SV=1 104 5e-21 tr|A9PDK5|A9PDK5_POPTR Putative uncharacterized protein OS=Popul... 101 3e-20 tr|A7P384|A7P384_VITVI Chromosome chr1 scaffold_5, whole genome ... 101 3e-20 tr|B6TT59|B6TT59_MAIZE Fiber protein Fb34 OS=Zea mays PE=2 SV=1 100 8e-20 tr|Q9FX59|Q9FX59_ARATH T6J4.13 protein (Expressed protein) (Puta... 99 2e-19 tr|Q8H8J9|Q8H8J9_ORYSJ Os10g0495900 protein OS=Oryza sativa subs... 99 2e-19 tr|A2Z8Y1|A2Z8Y1_ORYSI Putative uncharacterized protein OS=Oryza... 99 2e-19 tr|B7FH32|B7FH32_MEDTR Putative uncharacterized protein OS=Medic... 99 3e-19 tr|Q7XKA9|Q7XKA9_ORYSJ Os04g0678200 protein OS=Oryza sativa subs... 98 4e-19 tr|Q259E5|Q259E5_ORYSA H0801D08.4 protein (H0402C08.14 protein) ... 98 4e-19 tr|B4FVT6|B4FVT6_MAIZE Fiber protein Fb34 OS=Zea mays PE=2 SV=1 98 4e-19 tr|A2XYZ8|A2XYZ8_ORYSI Putative uncharacterized protein OS=Oryza... 98 4e-19 tr|Q8W576|Q8W576_ARATH Putative uncharacterized protein (At1g610... 96 1e-18 tr|A7R787|A7R787_VITVI Chromosome undetermined scaffold_1621, wh... 96 2e-18 tr|Q8LCJ0|Q8LCJ0_ARATH Putative uncharacterized protein OS=Arabi... 95 4e-18 tr|Q6H422|Q6H422_ORYSJ Os09g0281300 protein OS=Oryza sativa subs... 94 5e-18 tr|B8BGD1|B8BGD1_ORYSI Putative uncharacterized protein OS=Oryza... 94 5e-18
>tr|A9NNH9|A9NNH9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 189
Score = 127 bits (319), Expect = 6e-28 Identities = 67/169 (39%), Positives = 89/169 (52%) Frame = +3
Query: 132 ASTXXXXXXXXXXXXAFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXX 311 AST AFGL + AEQRR+ K V D S+Y +C Y SDI Sbjct: 6 ASTLLLIIVFILDVIAFGLAVAAEQRRSTAKVVPDPNSEYTYCVYDSDIATGYGVGAFLF 65
Query: 312 XXXXXXXXXGATRCLCCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIR 491 GATRCLCCG SL+PG +RA A++ FI WL+F++AE CF+ GA +NA H + Sbjct: 66 LFVSQALIMGATRCLCCGRSLRPGGSRASAIVLFIATWLTFIIAEACFVGGAARNAYHTK 125
Query: 492 YFSSIQVTSKPTCSAIRKDXXXXXXXXXXXXXILSVAYYLCCSKAQEGG 638 Y QVT+ +C +RK ILS YY+ ++++EGG Sbjct: 126 YRGFYQVTNL-SCETLRKGVFAAGASFTVFTLILSELYYVSFARSKEGG 173
>tr|A7P1I7|A7P1I7_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027631001 PE=4 SV=1 Length = 185
Score = 122 bits (305), Expect = 2e-26 Identities = 66/166 (39%), Positives = 87/166 (52%) Frame = +3
Query: 132 ASTXXXXXXXXXXXXAFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXX 311 AST AFGL + AEQRR+ + VTD +Y++C Y SDI Sbjct: 2 ASTVILVVVLIFDVIAFGLAVAAEQRRSTAQVVTDSEDNYKYCVYDSDISTGLGVGALLF 61
Query: 312 XXXXXXXXXGATRCLCCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIR 491 A+RC CCG +L PG +RA+AVI FI W++FL+AEIC LAG+V+NA H + Sbjct: 62 LFASQAIIMVASRCFCCGKALNPGGSRAWAVILFITCWVTFLIAEICLLAGSVRNAYHTK 121
Query: 492 YFSSIQVTSKPTCSAIRKDXXXXXXXXXXXXXILSVAYYLCCSKAQ 629 Y +I P+C +RK ILS YY+C SKA+ Sbjct: 122 Y-RTIFSEDPPSCETLRKGVFGAGAAFTFFTAILSELYYVCYSKAR 166
>tr|Q9LDK1|Q9LDK1_ARATH Gb|AAF30339.1 (AT3g15480/MJK13_14) (Putative uncharacterized protein) (MJK13.14 protein) OS=Arabidopsis thaliana GN=MJK13.14 PE=2 SV=1 Length = 175
Score = 116 bits (291), Expect = 1e-24 Identities = 58/152 (38%), Positives = 80/152 (52%) Frame = +3
Query: 177 AFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXXXXXXXXXXXGATRCL 356 A GL I AEQRR+ GK TD Y +C Y +DI A+RC Sbjct: 17 AVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFVSQVLIMAASRCF 76
Query: 357 CCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIRYFSSIQVTSKPTCSA 536 CCG SL PG +RA A+I F++ W+ FL+AE+C LA +++NA H +Y +V P+C Sbjct: 77 CCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQYRKMWKVEDPPSCEV 136
Query: 537 IRKDXXXXXXXXXXXXXILSVAYYLCCSKAQE 632 IRK I+S YY+C S+A++ Sbjct: 137 IRKGVFAAGAAFTLFTAIVSQFYYVCYSRARD 168
>tr|A9NS70|A9NS70_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 190
Score = 115 bits (289), Expect = 2e-24 Identities = 59/154 (38%), Positives = 89/154 (57%), Gaps = 1/154 (0%) Frame = +3
Query: 177 AFGLGIGAEQRRAEGKYVTD-DPSDYQWCQYSSDIXXXXXXXXXXXXXXXXXXXXGATRC 353 AFG + AE+RR+ G+ V + + D +C Y SDI G T+C Sbjct: 21 AFGFAVAAERRRSTGRVVPEPNEVDVTYCVYKSDIATGYGVGAFLFLLLAEALIMGVTKC 80
Query: 354 LCCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIRYFSSIQVTSKPTCS 533 LCCG+SL PG +RA+A+I+F+ +WL+FL+AE C +AGAV+NA H +Y +S+ + + +C Sbjct: 81 LCCGSSLTPGGSRAWAIIYFLSSWLTFLIAETCLMAGAVRNAHHTKYRNSLHIGTF-SCE 139
Query: 534 AIRKDXXXXXXXXXXXXXILSVAYYLCCSKAQEG 635 +RK ILSV YYL +K+++G Sbjct: 140 TLRKGVFGAGAAFTVFTMILSVLYYLNFTKSRDG 173
>tr|Q9C930|Q9C930_ARATH Putative uncharacterized protein F14G24.18 (Putative uncharacterized protein At1g52910) (At1g52910) OS=Arabidopsis thaliana GN=At1g52910 PE=2 SV=1 Length = 175
Score = 115 bits (288), Expect = 2e-24 Identities = 56/153 (36%), Positives = 82/153 (53%) Frame = +3
Query: 177 AFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXXXXXXXXXXXGATRCL 356 A GL I AEQRR+ GK V D +++ C+Y SDI A+RC Sbjct: 17 AVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFISQVIIMVASRCF 76
Query: 357 CCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIRYFSSIQVTSKPTCSA 536 CCG +LKPG +RA ++ F++ W+ FL+AE+C LAG+++NA H Y + + P+C Sbjct: 77 CCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRRMWNIENPPSCEV 136
Query: 537 IRKDXXXXXXXXXXXXXILSVAYYLCCSKAQEG 635 IRK I+S YY+ S+A++G Sbjct: 137 IRKGVFAAGASFALFTAIVSQFYYISYSRARDG 169
>tr|Q6T7D3|Q6T7D3_GOSBA Fiber protein Fb34 OS=Gossypium barbadense PE=2 SV=1 Length = 185
Score = 111 bits (277), Expect = 4e-23 Identities = 58/152 (38%), Positives = 79/152 (51%) Frame = +3
Query: 177 AFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXXXXXXXXXXXGATRCL 356 AFGL + AEQRR+ K V D +Y +C Y S I A++C Sbjct: 17 AFGLAVAAEQRRSTAKIVQDSEVNYNYCVYDSYISTGYGVGAFLFLMVSQALIMAASKCF 76
Query: 357 CCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIRYFSSIQVTSKPTCSA 536 CCG L P +RA+AVI FI+ WL FL+AEIC LAG+V+NA H +Y +I P+C Sbjct: 77 CCGKGLNPSGSRAWAVILFIVCWLFFLIAEICLLAGSVRNAYHTKY-RTIFSEQPPSCET 135
Query: 537 IRKDXXXXXXXXXXXXXILSVAYYLCCSKAQE 632 +RK I++ YY+C S A++ Sbjct: 136 VRKGVFGAGAAFIFLNAIVNKFYYICYSSARD 167
>tr|B6UFS5|B6UFS5_MAIZE Fiber protein Fb34 OS=Zea mays PE=2 SV=1 Length = 182
Score = 109 bits (273), Expect = 1e-22 Identities = 59/152 (38%), Positives = 78/152 (51%) Frame = +3
Query: 177 AFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXXXXXXXXXXXGATRCL 356 AFGLG+ AEQRR+ D +Y +C Y SDI A+RC Sbjct: 17 AFGLGVAAEQRRSRATVTPDAAKEYDYCVYDSDIATGYGVGALLLLAAAQVVLMLASRCF 76
Query: 357 CCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIRYFSSIQVTSKPTCSA 536 CCG LKPG +RA A+I F+ W++FL+AE C LAG+V+NA H RY + +C Sbjct: 77 CCGRGLKPGGSRACALILFLFTWVTFLIAEACLLAGSVRNAYHTRY-RGVFYGESLSCET 135
Query: 537 IRKDXXXXXXXXXXXXXILSVAYYLCCSKAQE 632 +RK IL YYL SK+++ Sbjct: 136 VRKGVFAAGAAFXFFTXILGEVYYLSYSKSRD 167
>tr|B6T362|B6T362_MAIZE Fiber protein Fb34 OS=Zea mays PE=2 SV=1 Length = 182
Score = 109 bits (273), Expect = 1e-22 Identities = 57/152 (37%), Positives = 76/152 (50%) Frame = +3
Query: 177 AFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXXXXXXXXXXXGATRCL 356 AFGLG+ AEQRR+ D +Y +C Y SDI A+RC Sbjct: 17 AFGLGVAAEQRRSRATVTPDAAKEYDYCVYDSDIATGYGVGALLLLAAAQVVLMLASRCF 76
Query: 357 CCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIRYFSSIQVTSKPTCSA 536 CCG LKPG +RA A+I F+ W++FL+AE C LAG+V+NA H RY + +C Sbjct: 77 CCGRGLKPGGSRACALILFLFTWVTFLIAEACLLAGSVRNAYHTRY-RGVFYGESLSCET 135
Query: 537 IRKDXXXXXXXXXXXXXILSVAYYLCCSKAQE 632 +RK IL YYL SK+++ Sbjct: 136 VRKGVFAAGAAFTFFTAILGEVYYLSYSKSRD 167
>tr|A9P8A6|A9P8A6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 183
Score = 107 bits (267), Expect = 6e-22 Identities = 58/152 (38%), Positives = 76/152 (50%) Frame = +3
Query: 177 AFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXXXXXXXXXXXGATRCL 356 AFGL + AEQRR+ D DY +C Y SDI A++C Sbjct: 17 AFGLAVAAEQRRSTATVQPDTEKDYSYCIYDSDIATGFGVGAFLFLMASQVLIMFASKCF 76
Query: 357 CCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIRYFSSIQVTSKPTCSA 536 CCG L PG +RA+AVI +I W+ F +AEIC LAG+V+NA H RY + T C + Sbjct: 77 CCGKPLSPGGSRAWAVILYITCWVFFFIAEICLLAGSVRNAYHTRYKNFFGETL--DCPS 134
Query: 537 IRKDXXXXXXXXXXXXXILSVAYYLCCSKAQE 632 +RK I+S YY+C SKA + Sbjct: 135 LRKGVFGAGAAFTLFTAIVSELYYICYSKASD 166
>tr|A9NLP2|A9NLP2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 175
Score = 107 bits (266), Expect = 8e-22 Identities = 55/152 (36%), Positives = 79/152 (51%) Frame = +3
Query: 177 AFGLGIGAEQRRAEGKYVTDDPSDYQWCQYSSDIXXXXXXXXXXXXXXXXXXXXGATRCL 356 AFGL + AE+RR+ G D + +C Y+SDI TRCL Sbjct: 17 AFGLAVAAERRRSTGVVKPDQYDERTYCVYNSDISTWYGVGGFLFLLASQALVMAFTRCL 76
Query: 357 CCGNSLKPGAARAFAVIFFILNWLSFLVAEICFLAGAVQNAKHIRYFSSIQVTSKPTCSA 536 CCG+ LKPG +R +A+I F + W++FL+AE CFLAGA +NA H +Y + +C Sbjct: 77 CCGSVLKPGGSRVWAIILFFICWVTFLIAEACFLAGAARNAYHTKYRGYFSMHDL-SCET 135
Query: 537 IRKDXXXXXXXXXXXXXILSVAYYLCCSKAQE 632 +RK IL++ YY C +KA++ Sbjct: 136 LRKGVFAAGAAFTVFTLILNLFYYTCYAKAKQ 167
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