DK950215
Clone id TST38A01NGRL0008_B03
Library
Length 617
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_B03. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CTGAGGAGCAAAAGGGAGGGAGCAGGCGTAGCGATGAGTCACCGCAAGTTCGAGCACCCT
CGCCACGGATCCCTGGGTTTCCTACCTCGCAAGCGCGCTCGCCGCCACAGAGGAAAGGTG
AAATCCTTCCCCAAGGATGATCCTGCAAAGAAGCCCCACCTCACTGCTTTCCTTGGCTAC
AAAGCTGGCATGACCCACATTGTGAGGGAGGTGGAGAAGCCTGGATCAAAACTCCACAAG
AAGGAGACATGTGAGGCCGTCACAGTCATTGAGACTCCACCTATGATTGTTGTCGGTCTT
GTTGCATATGTGAAGACTCCTCGTGGGCTGCGAACTTTGACTACCGTGTTTGCCCAGCAT
TTAAGTGATGAGTTGAGGAGGCGTTTCTACAAGAACTGGTACAAGTCCAAGAAGAAGGCA
TTCACCAAGTACTCCAAGAAGTTTGAACAGGAGGAGGGTAAGAAGGACATAGAATCTGAA
CTCGAGAAGATGAAGAAATACGGGAGTGTCATCCGTGTGCTTGCACACACTCAAGTTAGG
AAGCTGAAAGGAATCAAGCAGAAGAAGGCTCATCTTATGGAGATCCAGGTGAATGGTGGT
ACCGTAGCTGAGAAGGT
■■Homology search results ■■ -
sp_hit_id P22738
Definition sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis thaliana
Align length 194
Score (bit) 313.0
E-value 5.0e-85
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950215|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_B03, 5'
(617 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis t... 313 5e-85
sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa sub... 309 7e-84
sp|P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis t... 306 4e-83
sp|P39023|RL3_HUMAN 60S ribosomal protein L3 OS=Homo sapiens GN=... 280 6e-75
sp|P21531|RL3_RAT 60S ribosomal protein L3 OS=Rattus norvegicus ... 277 4e-74
sp|Q4R5Q0|RL3_MACFA 60S ribosomal protein L3 OS=Macaca fascicula... 277 4e-74
sp|P27659|RL3_MOUSE 60S ribosomal protein L3 OS=Mus musculus GN=... 274 3e-73
sp|P39872|RL3_BOVIN 60S ribosomal protein L3 OS=Bos taurus GN=RP... 273 7e-73
sp|P40372|RL3A_SCHPO 60S ribosomal protein L3-A OS=Schizosacchar... 263 7e-70
sp|P36584|RL3B_SCHPO 60S ribosomal protein L3-B OS=Schizosacchar... 262 9e-70
sp|Q8NKF4|RL3_ASPFU 60S ribosomal protein L3 OS=Aspergillus fumi... 261 2e-69
sp|P34113|RL3_DICDI 60S ribosomal protein L3 OS=Dictyostelium di... 257 3e-68
sp|P59671|RL3_NEUCR 60S ribosomal protein L3 OS=Neurospora crass... 256 5e-68
sp|P49149|RL3_TOXCA 60S ribosomal protein L3 OS=Toxocara canis G... 256 9e-68
sp|Q92901|RL3L_HUMAN 60S ribosomal protein L3-like OS=Homo sapie... 248 1e-65
sp|Q3SZ10|RL3L_BOVIN 60S ribosomal protein L3-like OS=Bos taurus... 248 2e-65
sp|P50880|RL3_CAEEL 60S ribosomal protein L3 OS=Caenorhabditis e... 247 4e-65
sp|O16797|RL3_DROME 60S ribosomal protein L3 OS=Drosophila melan... 246 7e-65
sp|Q9NBK4|RL3_CAEBR 60S ribosomal protein L3 OS=Caenorhabditis b... 245 2e-64
sp|Q759R7|RL3_ASHGO 60S ribosomal protein L3 OS=Ashbya gossypii ... 244 3e-64
sp|Q6FTJ2|RL3_CANGA 60S ribosomal protein L3 OS=Candida glabrata... 241 3e-63
sp|Q6BXM5|RL3_DEBHA 60S ribosomal protein L3 OS=Debaryomyces han... 240 4e-63
sp|Q6CJR7|RL3_KLULA 60S ribosomal protein L3 OS=Kluyveromyces la... 238 1e-62
sp|P14126|RL3_YEAST 60S ribosomal protein L3 OS=Saccharomyces ce... 238 2e-62
sp|Q8SQI3|RL3_ENCCU 60S ribosomal protein L3 OS=Encephalitozoon ... 150 7e-36
sp|A6UQJ0|RL3_METVS 50S ribosomal protein L3P OS=Methanococcus v... 105 2e-22
sp|Q9UWG2|RL3_METVA 50S ribosomal protein L3P OS=Methanococcus v... 105 2e-22
sp|O26110|RL3_METTH 50S ribosomal protein L3P OS=Methanobacteriu... 105 2e-22
sp|Q6LX10|RL3_METMP 50S ribosomal protein L3P OS=Methanococcus m... 105 2e-22
sp|A6VHD2|RL3_METM7 50S ribosomal protein L3P OS=Methanococcus m... 105 2e-22

>sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis
thaliana GN=ARP2 PE=2 SV=4
Length = 390

Score = 313 bits (802), Expect = 5e-85
Identities = 151/194 (77%), Positives = 168/194 (86%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT+IETPPM+VVG+V YVKTPRGLR+L TV+AQHLS+ELRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E EEGKKDI+S+LEKMKKY SVIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
L EIQ+NGG +A+K
Sbjct: 181 LNEIQINGGDIAKK 194


>sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa subsp.
japonica GN=RPL3 PE=2 SV=2
Length = 389

Score = 309 bits (792), Expect = 7e-84
Identities = 143/194 (73%), Positives = 170/194 (87%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFPKDD +K HLT+F+GYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLR+L +V+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + + GKK+I+ +LEKMKKY S++RV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
LMEIQ+NGGT+A+K
Sbjct: 181 LMEIQINGGTIADK 194


>sp|P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis
thaliana GN=ARP1 PE=2 SV=5
Length = 389

Score = 306 bits (785), Expect = 4e-83
Identities = 145/194 (74%), Positives = 167/194 (86%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD K TAF+GYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT+IETP M+VVG+VAYVKTPRGLR+L TV+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + E+GKK I+++LEKMKKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
+MEIQ+NGGT+A+K
Sbjct: 181 MMEIQINGGTIAQK 194


>sp|P39023|RL3_HUMAN 60S ribosomal protein L3 OS=Homo sapiens
GN=RPL3 PE=1 SV=2
Length = 403

Score = 280 bits (715), Expect = 6e-75
Identities = 135/194 (69%), Positives = 157/194 (80%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
++PGSK++KKE EAVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + E+GKK +E + MKKY VIRV+AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGTVAEK
Sbjct: 180 LMEIQVNGGTVAEK 193


>sp|P21531|RL3_RAT 60S ribosomal protein L3 OS=Rattus norvegicus
GN=Rpl3 PE=1 SV=3
Length = 403

Score = 277 bits (708), Expect = 4e-74
Identities = 133/194 (68%), Positives = 156/194 (80%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
++PGSK++KKE EAVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + + GKK +E + MKKY VIR++AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGTVAEK
Sbjct: 180 LMEIQVNGGTVAEK 193


>sp|Q4R5Q0|RL3_MACFA 60S ribosomal protein L3 OS=Macaca fascicularis
GN=RPL3 PE=2 SV=3
Length = 403

Score = 277 bits (708), Expect = 4e-74
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
++PGSK++KKE AVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + E+GKK +E + MKKY VIRV+AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGTVAEK
Sbjct: 180 LMEIQVNGGTVAEK 193


>sp|P27659|RL3_MOUSE 60S ribosomal protein L3 OS=Mus musculus
GN=Rpl3 PE=2 SV=2
Length = 403

Score = 274 bits (700), Expect = 3e-73
Identities = 132/194 (68%), Positives = 155/194 (79%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDD +K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
++PGSK++KKE EAVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + + GKK +E + MKKY VIR++AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGTVAEK
Sbjct: 180 LMEIQVNGGTVAEK 193


>sp|P39872|RL3_BOVIN 60S ribosomal protein L3 OS=Bos taurus GN=RPL3
PE=1 SV=2
Length = 403

Score = 273 bits (697), Expect = 7e-73
Identities = 130/194 (67%), Positives = 155/194 (79%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDD +K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
++PGSK++KKE EAVT++ETPPM++VG+V YV+TPRGLRT T+FA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + +GKK +E + MKKY VIRV+AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 574 LMEIQVNGGTVAEK 615
LME+QVNGGTVAEK
Sbjct: 180 LMEVQVNGGTVAEK 193


>sp|P40372|RL3A_SCHPO 60S ribosomal protein L3-A
OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2
Length = 388

Score = 263 bits (671), Expect = 7e-70
Identities = 131/194 (67%), Positives = 157/194 (80%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSH KFE PRHGSLGFLPRKRA R RGKVK+FPKDD +K HLTAFLGYKAGMTHIVR++
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
++PGSK+HK+E EAVTVIETPPM+VVG+V YV+TPRGLR+LTTV+A+HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + E + I ELE++KKY SV+RVLAHTQ+RK + QKKAH
Sbjct: 121 NW--FKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGG+VA+K
Sbjct: 178 LMEIQVNGGSVADK 191


>sp|P36584|RL3B_SCHPO 60S ribosomal protein L3-B
OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2
Length = 388

Score = 262 bits (670), Expect = 9e-70
Identities = 130/194 (67%), Positives = 157/194 (80%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSH KFE PRHGSLGFLPRKRA R RGKVK+FPKDD +K HLTAFLGYKAGMTHIVR++
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
++PGSK+HK+E EAVT+IETPPM+VVG+V YV+TPRGLR+LTTV+A+HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + E + I ELE++KKY SV+RVLAHTQ+RK + QKKAH
Sbjct: 121 NW--FKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGG+VA+K
Sbjct: 178 LMEIQVNGGSVADK 191


tr_hit_id A9TUZ9
Definition tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 194
Score (bit) 327.0
E-value 4.0e-88
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950215|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_B03, 5'
(617 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella paten... 327 4e-88
tr|A9SGV3|A9SGV3_PHYPA Predicted protein OS=Physcomitrella paten... 324 3e-87
tr|A9NZI7|A9NZI7_PICSI Putative uncharacterized protein OS=Picea... 320 5e-86
tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella paten... 319 9e-86
tr|A5BU35|A5BU35_VITVI Putative uncharacterized protein (Chromos... 318 2e-85
tr|B4FFZ6|B4FFZ6_MAIZE 60S ribosomal protein L3 OS=Zea mays PE=2... 317 5e-85
tr|Q9SBR8|Q9SBR8_MEDVA L3 Ribosomal protein OS=Medicago varia GN... 315 1e-84
tr|A9NRB1|A9NRB1_PICSI Putative uncharacterized protein OS=Picea... 314 3e-84
tr|B4FBM9|B4FBM9_MAIZE Putative uncharacterized protein OS=Zea m... 313 4e-84
tr|Q6TKR0|Q6TKR0_TOBAC Ribosomal protein L3A OS=Nicotiana tabacu... 313 5e-84
tr|A9PB80|A9PB80_POPTR Putative uncharacterized protein OS=Popul... 312 9e-84
tr|A9P806|A9P806_POPTR Putative uncharacterized protein OS=Popul... 311 1e-83
tr|Q6SKP4|Q6SKP4_SOLLC Ribosomal protein L3 OS=Solanum lycopersi... 311 2e-83
tr|Q2VCJ2|Q2VCJ2_SOLTU Ribosomal protein L3-like OS=Solanum tube... 311 2e-83
tr|A7R7U1|A7R7U1_VITVI Chromosome undetermined scaffold_2025, wh... 311 3e-83
tr|Q6V959|Q6V959_WHEAT Ribosomal protein L3 (Ribosomal protein L... 310 3e-83
tr|Q7X748|Q7X748_WHEAT Ribosomal protein L3 (Ribosomal protein L... 310 4e-83
tr|Q7X744|Q7X744_WHEAT Ribosomal protein L3 (Ribosomal protein L... 310 4e-83
tr|A1YE28|A1YE28_WHEAT Ribosomal protein L3-A2-II OS=Triticum ae... 310 4e-83
tr|A5BAZ0|A5BAZ0_VITVI Putative uncharacterized protein OS=Vitis... 310 6e-83
tr|Q0IPU6|Q0IPU6_ORYSJ Os12g0167900 protein OS=Oryza sativa subs... 309 7e-83
tr|A9PCQ3|A9PCQ3_POPTR Putative uncharacterized protein OS=Popul... 309 7e-83
tr|A2ZIF8|A2ZIF8_ORYSI Putative uncharacterized protein OS=Oryza... 309 7e-83
tr|A1YE34|A1YE34_WHEAT Ribosomal protein L3-B2 OS=Triticum aesti... 308 1e-82
tr|Q53JG0|Q53JG0_ORYSJ 60S ribosomal protein L3, putative, expre... 307 4e-82
tr|A7Y7Q9|A7Y7Q9_PRUDU Putative 60S ribosomal protein L3 (Fragme... 307 4e-82
tr|A5D934|A5D934_ORYSA Ribosomal protein L3B OS=Oryza sativa GN=... 307 4e-82
tr|A2ZBV5|A2ZBV5_ORYSI Putative uncharacterized protein OS=Oryza... 307 4e-82
tr|Q0WLE7|Q0WLE7_ARATH Putative uncharacterized protein At1g4317... 306 5e-82
tr|Q8H154|Q8H154_ARATH Putative ribosomal protein OS=Arabidopsis... 305 1e-81

>tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_225706 PE=3 SV=1
Length = 392

Score = 327 bits (837), Expect = 4e-88
Identities = 157/194 (80%), Positives = 172/194 (88%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKDDP KKPHLT+FLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRSRGKVKTFPKDDPVKKPHLTSFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT++ETPP+IVVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E EEGK+D++SELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKRDLQSELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
L EIQVNGGT+AEK
Sbjct: 181 LAEIQVNGGTIAEK 194


>tr|A9SGV3|A9SGV3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_234838 PE=3 SV=1
Length = 392

Score = 324 bits (830), Expect = 3e-87
Identities = 157/194 (80%), Positives = 170/194 (87%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKDD +K PHLT+FLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDDASKAPHLTSFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT++ETPPMIVVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E EEGKKD+ESELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWSKSKKKAFSNYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
L EIQVNGG +AEK
Sbjct: 181 LAEIQVNGGNIAEK 194


>tr|A9NZI7|A9NZI7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 389

Score = 320 bits (819), Expect = 5e-86
Identities = 153/194 (78%), Positives = 172/194 (88%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFP+DD +K LTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDQSKPCKLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT+IETPPM++VG+VAY+KTPRGLRTL TV+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTLIETPPMVIVGVVAYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + EEGKKDI++ELEKMKKY +VIRVLAHTQ++K+KG+KQKKAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKDIQTELEKMKKYATVIRVLAHTQIKKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGTVA+K
Sbjct: 181 LMEIQVNGGTVAQK 194


>tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_190959 PE=3 SV=1
Length = 392

Score = 319 bits (817), Expect = 9e-86
Identities = 154/194 (79%), Positives = 170/194 (87%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKD +K+PHLT+FLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDVASKEPHLTSFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT++ETPPM+VVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E EEGKKD+ESELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
L EIQVNGG++A K
Sbjct: 181 LAEIQVNGGSIAAK 194


>tr|A5BU35|A5BU35_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_59, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00031743001 PE=3 SV=1
Length = 389

Score = 318 bits (815), Expect = 2e-85
Identities = 151/194 (77%), Positives = 171/194 (88%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP+K LTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT++ETPPM++VG+VAYVKTPRGLR+L TV+AQHLS+E++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E EEGKK I+++LEKMKKY SVIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGT+A+K
Sbjct: 181 LMEIQVNGGTIAQK 194


>tr|B4FFZ6|B4FFZ6_MAIZE 60S ribosomal protein L3 OS=Zea mays PE=2
SV=1
Length = 389

Score = 317 bits (811), Expect = 5e-85
Identities = 150/194 (77%), Positives = 170/194 (87%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFP+DDP K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLRTL +V+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E + GKK+I+ +LEKMKKY SVIRV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGT+A+K
Sbjct: 181 LMEIQVNGGTIADK 194


>tr|Q9SBR8|Q9SBR8_MEDVA L3 Ribosomal protein OS=Medicago varia
GN=rl3 PE=2 SV=1
Length = 388

Score = 315 bits (808), Expect = 1e-84
Identities = 148/194 (76%), Positives = 169/194 (87%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K P LTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCE VT+IETPPM+VVG+V YVKTPRGLRTL TV+ QHLS+E++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E +EGKK+I+++LEK+KKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
+MEIQVNGGT+A+K
Sbjct: 181 IMEIQVNGGTIAQK 194


>tr|A9NRB1|A9NRB1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 389

Score = 314 bits (804), Expect = 3e-84
Identities = 149/194 (76%), Positives = 169/194 (87%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFP+DDP+K LTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT+IETPPM++VG+V Y+KTPRGLRTL V+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNAVWAQHLSEEVRRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW + EEGKK+I++ELEKMKKY +VIRVLAHTQ++K+KG+KQ KAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKEIQTELEKMKKYATVIRVLAHTQIKKMKGLKQNKAH 180

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGTV +K
Sbjct: 181 LMEIQVNGGTVPQK 194


>tr|B4FBM9|B4FBM9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 389

Score = 313 bits (803), Expect = 4e-84
Identities = 149/194 (76%), Positives = 169/194 (87%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFP+DD K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDAKKPCHLTAFLGYKAGMTHIVREV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLRTL +V+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E + GKK+I+ +LEKMKKY SVIRV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGT+A+K
Sbjct: 181 LMEIQVNGGTIADK 194


>tr|Q6TKR0|Q6TKR0_TOBAC Ribosomal protein L3A OS=Nicotiana tabacum
GN=RPL3A PE=2 SV=1
Length = 389

Score = 313 bits (802), Expect = 5e-84
Identities = 149/194 (76%), Positives = 168/194 (86%)
Frame = +1

Query: 34 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 213
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60

Query: 214 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 393
EKPGSKLHKKETCEAVT+IETPPM++VG+V YVKTPRGLR L TV+AQHLS+EL+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120

Query: 394 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 573
NW E +EGKKDI+++LEK+KKY VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 574 LMEIQVNGGTVAEK 615
LMEIQVNGGT+A+K
Sbjct: 181 LMEIQVNGGTIAQK 194