DK950183 |
Clone id |
TST38A01NGRL0007_P18 |
Library |
TST38 |
Length |
678 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_P18. 5' end sequence. |
Accession |
DK950183 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3322Contig1 |
Sequence |
CCCTGCTCGCCTTCAACCGCGCCCGATTGTAGCTGAAATTGCAGTCTCGATAACGCTTTC CTTTCCCGTGAGCTCTCGTCGCTTGGCTGCAGAGAATCGGAAAAGCTCGTCGTATCGAAT CAGAAAATGCCGAGGGCACGCGTGAATGCCAATTTCGACTCCCCCAATGTGGACGTGATG GTGGACATGGGACACCCCCTGCTCAACAGGGTTGTCGATGGCTTCCTTAAAGTTGGTGGG GTTGGAGCAGTCCATGCGTTGGCACAAGAGACTTACGGTGTTGTACGCCGAGAGGAGGCA ACAAAGAGGTCCTTGGAGTTGATGGCCCAGCGAACTGGCAAGGAGGCTGTTCAATGGGGA CTAGTTGCTGGCGTATATAGTGGCATGACATATGCGATGCAAGAAGCAAGAGGAACTCAT GATTGGAAAAATGCGCTGCTAGGAGGTGCCCTTACCGGAGCTGCACTCTCTCTTACGGAG TCAAACCCCCGTTCTGACCGCATCATCACTGGTGCTATCACGGGAGGGGCCATTGCCACA GCAGCTGAGTTCCTTCGCAACATCACCTAGAATTGTATCATGTCGTCGTGATTTAAGTGT ATGTGAACCTGGCTATGTCTTAATTGGTACTACTAGTTCACGTGGCACCAATCAGTCGTT GATGTTTCTCTATAATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7ZUH5 |
Definition |
sp|Q7ZUH5|RM14_DANRE 39S ribosomal protein L14, mitochondrial OS=Danio rerio |
Align length |
40 |
Score (bit) |
34.3 |
E-value |
0.63 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T2Y3 |
Definition |
tr|A9T2Y3|A9T2Y3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
147 |
Score (bit) |
170.0 |
E-value |
7.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950183|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_P18, 5' (678 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T2Y3|A9T2Y3_PHYPA Predicted protein OS=Physcomitrella paten... 170 7e-41 tr|A9S455|A9S455_PHYPA Predicted protein OS=Physcomitrella paten... 170 7e-41 tr|A9SDP8|A9SDP8_PHYPA Predicted protein OS=Physcomitrella paten... 140 7e-32 tr|A9T845|A9T845_PHYPA Predicted protein OS=Physcomitrella paten... 133 1e-29 tr|A9U1R6|A9U1R6_PHYPA Predicted protein OS=Physcomitrella paten... 122 2e-26 tr|A9TGM7|A9TGM7_PHYPA Predicted protein OS=Physcomitrella paten... 117 5e-25 tr|A9NKV8|A9NKV8_PICSI Putative uncharacterized protein OS=Picea... 116 1e-24 tr|A9TN08|A9TN08_PHYPA Predicted protein OS=Physcomitrella paten... 115 3e-24 tr|Q65XV6|Q65XV6_ORYSJ Os05g0111200 protein OS=Oryza sativa subs... 112 2e-23 tr|B8AWZ4|B8AWZ4_ORYSI Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|B8LMN9|B8LMN9_PICSI Putative uncharacterized protein OS=Picea... 112 3e-23 tr|B7FGP0|B7FGP0_MEDTR Putative uncharacterized protein OS=Medic... 110 8e-23 tr|B6TFZ9|B6TFZ9_MAIZE Amino acid selective channel protein OS=Z... 110 1e-22 tr|B6T2H5|B6T2H5_MAIZE Amino acid selective channel protein OS=Z... 108 4e-22 tr|Q5CZ54|Q5CZ54_SOLTU Pom14 protein OS=Solanum tuberosum GN=pom... 107 9e-22 tr|Q41050|Q41050_PEA Core protein OS=Pisum sativum PE=2 SV=1 105 3e-21 tr|B3VTB6|B3VTB6_SORBI Amino acid selective channel protein OS=S... 105 3e-21 tr|Q2VW44|Q2VW44_9LILI Dehydration up-regulated putative membran... 104 5e-21 tr|B8A9Y0|B8A9Y0_ORYSI Putative uncharacterized protein OS=Oryza... 102 3e-20 tr|Q93Z87|Q93Z87_BROIN Stress-inducible membrane pore protein OS... 100 7e-20 tr|O82688|O82688_HORVU Amino acid selective channel protein OS=H... 100 7e-20 tr|B6TTP4|B6TTP4_MAIZE Stress-inducible membrane pore protein OS... 99 2e-19 tr|A9PFS3|A9PFS3_POPTR Putative uncharacterized protein OS=Popul... 99 2e-19 tr|Q9FP64|Q9FP64_ORYSJ Putative stress-inducible membrane pore p... 98 6e-19 tr|B8A6Q5|B8A6Q5_ORYSI Putative uncharacterized protein OS=Oryza... 98 6e-19 tr|Q2HU23|Q2HU23_MEDTR Mitochondrial import inner membrane trans... 97 7e-19 tr|Q10MK4|Q10MK4_ORYSJ Os03g0305600 protein OS=Oryza sativa subs... 97 9e-19 tr|A7Q8N5|A7Q8N5_VITVI Chromosome chr5 scaffold_64, whole genome... 97 1e-18 tr|A7NZ04|A7NZ04_VITVI Chromosome chr6 scaffold_3, whole genome ... 95 5e-18 tr|Q8LGH9|Q8LGH9_ARATH Putative membrane channel protein OS=Arab... 94 6e-18
>tr|A9T2Y3|A9T2Y3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_218423 PE=4 SV=1 Length = 147
Score = 170 bits (431), Expect = 7e-41 Identities = 84/147 (57%), Positives = 102/147 (69%) Frame = +1
Query: 127 MPRARVNANFDSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATK 306 M RA VNA+F+ +VD +VD+GHP+LNRVVDGF+KVGGVGA+HA +Q+ + +EE K Sbjct: 1 MSRAHVNASFEPAHVDFLVDLGHPMLNRVVDGFVKVGGVGALHAASQDASRFLLQEETNK 60
Query: 307 RSLELMAQRTGKEAVQWGLVAGVYSGMTYAMQEARGTHDWKNXXXXXXXXXXXXSLTESN 486 +SLE+ QR GKEAVQWGLVAGVY+GMTY MQEARG HDWKN SLTE+N Sbjct: 61 KSLEMSVQRMGKEAVQWGLVAGVYTGMTYGMQEARGVHDWKNALLGGALTGAALSLTEAN 120
Query: 487 PRSDRXXXXXXXXXXXXXXXEFLRNIT 567 PRSDR EFLR++T Sbjct: 121 PRSDRIVRGAITGGAIATAAEFLRSLT 147
>tr|A9S455|A9S455_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74335 PE=4 SV=1 Length = 147
Score = 170 bits (431), Expect = 7e-41 Identities = 85/147 (57%), Positives = 102/147 (69%) Frame = +1
Query: 127 MPRARVNANFDSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATK 306 M RA V+A+ ++P+ D +VD+GHPLLNRVVDGF+KVGGVGA+HA +Q+TY + +EE K Sbjct: 1 MVRAHVSASVNTPHADFLVDLGHPLLNRVVDGFVKVGGVGALHAASQDTYLFLLQEETNK 60
Query: 307 RSLELMAQRTGKEAVQWGLVAGVYSGMTYAMQEARGTHDWKNXXXXXXXXXXXXSLTESN 486 +SLE QR GKEAVQWGLVAGVY+GMTY MQEARG HDWKN SLTE N Sbjct: 61 KSLEKTVQRMGKEAVQWGLVAGVYTGMTYGMQEARGVHDWKNALLGGALTGAALSLTEPN 120
Query: 487 PRSDRXXXXXXXXXXXXXXXEFLRNIT 567 PRSDR EFLR++T Sbjct: 121 PRSDRVVRGAITGGAIATAAEFLRSLT 147
>tr|A9SDP8|A9SDP8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164391 PE=4 SV=1 Length = 147
Score = 140 bits (353), Expect = 7e-32 Identities = 67/146 (45%), Positives = 93/146 (63%) Frame = +1
Query: 127 MPRARVNANFDSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATK 306 M R+R +A+ +SP VDV+VD+GHPLLN VDGFLKVGGVGA HA+ Q+T+ +++ E TK Sbjct: 1 MVRSRFSASVESPKVDVIVDLGHPLLNYSVDGFLKVGGVGAAHAVVQDTFRILKSEALTK 60
Query: 307 RSLELMAQRTGKEAVQWGLVAGVYSGMTYAMQEARGTHDWKNXXXXXXXXXXXXSLTESN 486 LE + +R G+E +QWG VAGVY+G+ Y+++++RG DWKN SLTES Sbjct: 61 NDLEKLVKRAGREGLQWGTVAGVYAGVEYSLEKSRGVQDWKNAAIGGAVTGAILSLTESG 120
Query: 487 PRSDRXXXXXXXXXXXXXXXEFLRNI 564 D+ EF+RN+ Sbjct: 121 FTKDKMLQQAITGGALATASEFIRNL 146
>tr|A9T845|A9T845_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_141693 PE=4 SV=1 Length = 139
Score = 133 bits (334), Expect = 1e-29 Identities = 69/138 (50%), Positives = 89/138 (64%), Gaps = 8/138 (5%) Frame = +1
Query: 178 MVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREE--------ATKRSLELMAQR 333 MVD+G+PLLNRVVDGF+KVGG+GA+HA AQ++Y + + ++RSLE A+R Sbjct: 1 MVDLGNPLLNRVVDGFIKVGGIGALHAAAQDSYRLTLQGTNCTFLYFTTSQRSLEKTARR 60
Query: 334 TGKEAVQWGLVAGVYSGMTYAMQEARGTHDWKNXXXXXXXXXXXXSLTESNPRSDRXXXX 513 GKEA+QWGL AGVY+G+TY+MQEARG DW+N SLTE++PR DR Sbjct: 61 LGKEALQWGLAAGVYTGVTYSMQEARGISDWRNPLVGGAITGAALSLTETDPRLDRVVQS 120
Query: 514 XXXXXXXXXXXEFLRNIT 567 EFLRN+T Sbjct: 121 AVTGSAIASAAEFLRNLT 138
>tr|A9U1R6|A9U1R6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110643 PE=4 SV=1 Length = 147
Score = 122 bits (306), Expect = 2e-26 Identities = 57/146 (39%), Positives = 90/146 (61%) Frame = +1
Query: 127 MPRARVNANFDSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATK 306 M R+R++A+ + P+++V+VD+GHPL N VDGFLKVG VGA HA Q+T+ +++ E+ TK Sbjct: 1 MVRSRLSASVEDPSLNVIVDLGHPLANTSVDGFLKVGAVGAAHAALQDTFRILKSEQVTK 60
Query: 307 RSLELMAQRTGKEAVQWGLVAGVYSGMTYAMQEARGTHDWKNXXXXXXXXXXXXSLTESN 486 +E + +RTG E +QWG VAGVY+G+ Y++++AR DWKN S+++ + Sbjct: 61 TDVEKLVKRTGFEGLQWGAVAGVYAGVEYSLEKARSKQDWKNAAIGGAVTGALLSVSDCS 120
Query: 487 PRSDRXXXXXXXXXXXXXXXEFLRNI 564 D+ E +RN+ Sbjct: 121 FARDKMVQHALTGAGIATASEIIRNL 146
>tr|A9TGM7|A9TGM7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_145315 PE=4 SV=1 Length = 148
Score = 117 bits (294), Expect = 5e-25 Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 1/147 (0%) Frame = +1
Query: 127 MPRARVNANFDSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATK 306 M R+R++A + PN+DV+VD+GHPLLN VDGFLKVGGVG HA Q+T+ ++R ++ TK Sbjct: 1 MVRSRLSAAVEKPNLDVIVDLGHPLLNSSVDGFLKVGGVGVAHAAVQDTFRILRSDQVTK 60
Query: 307 RSLELMAQRTGKEAVQWGLVAGVYSGMTYAMQEA-RGTHDWKNXXXXXXXXXXXXSLTES 483 LE + +R G E +QWG VAGVY+G+ Y++++A DW+N S+ + Sbjct: 61 NDLEKLVRRAGFEGLQWGAVAGVYAGVEYSLKKACAKKQDWRNAAIGGAVTGALLSVGDG 120
Query: 484 NPRSDRXXXXXXXXXXXXXXXEFLRNI 564 + D+ E +RN+ Sbjct: 121 SFSRDKMLQHALTGAGIATASEIIRNL 147
>tr|A9NKV8|A9NKV8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 147
Score = 116 bits (291), Expect = 1e-24 Identities = 58/147 (39%), Positives = 80/147 (54%) Frame = +1
Query: 127 MPRARVNANFDSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATK 306 MP R++AN SP V V++DMG+PLLNR VDGFLK+G VGA L +ETY + + TK Sbjct: 1 MPHGRISANVHSPTVGVVIDMGNPLLNRTVDGFLKIGTVGASRVLVEETYSSLSKGSVTK 60
Query: 307 RSLELMAQRTGKEAVQWGLVAGVYSGMTYAMQEARGTHDWKNXXXXXXXXXXXXSLTESN 486 LE ++ G E ++WG VAGVY+G+ Y ++ RG DWKN S ++ Sbjct: 61 HDLEHTIKKMGIEGLKWGAVAGVYTGVEYGVERIRGRRDWKNALISGAVTGAAMSFGDNK 120
Query: 487 PRSDRXXXXXXXXXXXXXXXEFLRNIT 567 D+ EF+R +T Sbjct: 121 YTRDKMIKDAITGGAIATAAEFIRYLT 147
>tr|A9TN08|A9TN08_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223774 PE=4 SV=1 Length = 146
Score = 115 bits (288), Expect = 3e-24 Identities = 52/92 (56%), Positives = 68/92 (73%) Frame = +1
Query: 157 DSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATKRSLELMAQRT 336 DSP VDV+VD+G+P+LN V+GFLKV VGA HA+ QE + + + E TKR LE M +R Sbjct: 11 DSPTVDVVVDIGNPILNSTVNGFLKVAPVGASHAVTQEAFRMFQDERVTKRDLERMVKRA 70
Query: 337 GKEAVQWGLVAGVYSGMTYAMQEARGTHDWKN 432 GK+ +QWG+VAGVYSG+ Y ++ RG DWKN Sbjct: 71 GKDGLQWGVVAGVYSGVQYGIERMRGRRDWKN 102
>tr|Q65XV6|Q65XV6_ORYSJ Os05g0111200 protein OS=Oryza sativa subsp. japonica GN=P0016H04.12 PE=2 SV=1 Length = 146
Score = 112 bits (281), Expect = 2e-23 Identities = 50/102 (49%), Positives = 66/102 (64%) Frame = +1
Query: 127 MPRARVNANFDSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATK 306 MPR + + SP +DV +DMG+P LNR VDGFLK+G VGA A++T+ + R + +K Sbjct: 1 MPRGGFSGSISSPRIDVAIDMGNPFLNRTVDGFLKIGAVGACKVAAEDTFDCLHRGDVSK 60
Query: 307 RSLELMAQRTGKEAVQWGLVAGVYSGMTYAMQEARGTHDWKN 432 LE M ++ KE WG VAGVY GM Y ++ RG HDWKN Sbjct: 61 HKLEHMLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRHDWKN 102
>tr|B8AWZ4|B8AWZ4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18168 PE=4 SV=1 Length = 146
Score = 112 bits (281), Expect = 2e-23 Identities = 50/102 (49%), Positives = 66/102 (64%) Frame = +1
Query: 127 MPRARVNANFDSPNVDVMVDMGHPLLNRVVDGFLKVGGVGAVHALAQETYGVVRREEATK 306 MPR + + SP +DV +DMG+P LNR VDGFLK+G VGA A++T+ + R + +K Sbjct: 1 MPRGGFSGSISSPRIDVAIDMGNPFLNRTVDGFLKIGAVGACKVAAEDTFDCLHRGDVSK 60
Query: 307 RSLELMAQRTGKEAVQWGLVAGVYSGMTYAMQEARGTHDWKN 432 LE M ++ KE WG VAGVY GM Y ++ RG HDWKN Sbjct: 61 HKLEHMLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRHDWKN 102
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