DK950071 [AcEST]

DK950071
Clone id	TST38A01NGRL0007_K24
Library	TST38
Length	705
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_K24. 5' end sequence.
Accession	DK950071
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	-
Sequence	CCACCTCGCAGCAGGCATTTTATTAATAAGCGACTTTTCATTTACCCTTGTTGGAATGTA GGTAGGGCAAATGGATAAAGGACCTATAAAAGAAATCCTTTGGACGCTAGTTGAAGACAG AAGGCTCAAAGGAGCAAGAACCCCAGCAGTACCTGCATGACCAGCTTCTTCTAGCATTTT CTCAGTAGGACCACCAGCGTTTTTGGACGTCAGCGTTCTCAGCCAGCACCGTTTTTGTTC ACCATCAGCGTATTGCCGCAGTACCTTATCAAATCAGCCTCGTCTCCTCGCGGTCAGCTT CCTCATCGCGACAGAATCAGTGTTTTCAGTTTTCAGCCAGCATTTTTCAGTTTTCAGCCT TCATCGACATCATCAGCGTCAGATCAGCCCATTAGCTTCGCTGCATGACTCTGATCTCAT CAGCATCCCTAGCATTTTCATATTTCAGCAGTTTCGGCCCTTAGCCTCGACCTCGTCGTC GTCGTCGTCGTTATCATCGTCGTCAAGTACCACAACATTTAGAACCATTGTACCAGACTT GTGCAATCTAAAGCAAATATCTCTCTAGCAATAGAGAGGGGGGCATATGGTGCCGTCTCT TCTCTCTCTCTGTCTAGCACTCTCAGTACTATTCACTCACAACTTTCCACTCTCTCTTTG TGTTGGTCATTACACATTCTCTCTCTTAGTAAGGAAAGCTCTCCC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950071\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_K24, 5' (705 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q1ZDY7
Definition	tr\|Q1ZDY7\|Q1ZDY7_9GAMM Conserved hypotheical protein OS=Psychromonas sp. CNPT3
Align length	64
Score (bit)	34.3
E-value	8.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950071\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_K24, 5' (705 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q1ZDY7\|Q1ZDY7_9GAMM Conserved hypotheical protein OS=Psychrom... 34 8.0 >tr\|Q1ZDY7\|Q1ZDY7_9GAMM Conserved hypotheical protein OS=Psychromonas sp. CNPT3 GN=PCNPT3_05956 PE=4 SV=1 Length = 561 Score = 34.3 bits (77), Expect = 8.0 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Frame = -2 Query: 704 GELSLLRERMCNDQHKERVESCE*IVLRVLDRE------REETAPYAPLSIAREIFALDC 543 G+L L R ++H + ++ E IVL ++DRE R+ T P L +ARE F Sbjct: 218 GQLELFARRARRNEHPKAMQELEMIVLHLIDREYADVIDRQLTTPEKVLMLARE-FRSRL 276 Query: 542 TSLV 531 TSL+ Sbjct: 277 TSLI 280