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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949897
Clone id TST38A01NGRL0007_D12
Library
Length 688
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_D12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
ATACTGGAAACCAAGGAAACTGAGTTGCGCTTTGCTTCTAGCTTCTCTCTAAACGCTCCG
AGCGGTTCCTGAAACGCAGGAACCAAAAGCTGCCGGGGCCTAGACTTCCCATTCGTCATT
TGAGCCGTATGCAAGGAAACTTGCACGTGCGGTTCAAAGAGGGGGGAAAGCTCTTCCGTT
CCGGGCTTACCTATCTGAATAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATT
GAAGTAGAGCGTATAACGTTTATGGCTTGAGGTAGAGCACTCAATGGGCTAGGGTAGCCC
AAAGCTTGACCGACCCCAAGGAAACTCCGAATACAGGCCATGGGTTTGTACAGACAGACT
TCGGGTGCTAAGATCCAAAGTCGAAAGGGAAACAGCCCAGATCGTACGCTAAGGTCCTTA
AGCAATCACTTAGTGGAAAAGGAAGTGATCAAGCGATGACAACCAGGGGGTGGGCTTGGA
AGCAGCCATCTTTCAAAGAAAGCGTAATAGCTCACTGGTCTAGCTTCATGGCACTGAAAA
TGTCTCGGGGCTCAAGTGACTCACCGAAGCGACGAGACCTTGAAAGAAGCTTTTTCAAGT
GTCAGTAGCGGAACGTTCTGTCAATCAAGGAAAGTTGTTGGTGACAACACCTGGGAGGTA
CCAGAAGTGAGAATGCTGACATGAGTAA
■■Homology search results ■■ -
sp_hit_id P29425
Definition sp|P29425|TX26_PHONI Neurotoxin Tx2-6 OS=Phoneutria nigriventer
Align length 50
Score (bit) 32.7
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949897|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_D12, 5'
         (688 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29425|TX26_PHONI Neurotoxin Tx2-6 OS=Phoneutria nigriventer ...    33   1.9  
sp|Q10MN8|C3H21_ORYSJ Putative zinc finger CCCH domain-containin...    30   9.2  
sp|O76198|TX21A_PHONI Neurotoxin Pn2-1A OS=Phoneutria nigrivente...    30   9.3  

>sp|P29425|TX26_PHONI Neurotoxin Tx2-6 OS=Phoneutria nigriventer
           PE=2 SV=2
          Length = 82

 Score = 32.7 bits (73), Expect = 1.9
 Identities = 21/50 (42%), Positives = 25/50 (50%)
 Frame = +1

Query: 79  GTKSCRGLDFPFVI*AVCKETCTCGSKRGESSSVPGLPI*ITKIGYSWFS 228
           G  +C G D P      CKETC C  +RGE   V G P  I + GY W +
Sbjct: 33  GRATCAGQDQP------CKETCDCCGERGE--CVCGGPC-ICRQGYFWIA 73


>sp|Q10MN8|C3H21_ORYSJ Putative zinc finger CCCH domain-containing
           protein 21 OS=Oryza sativa subsp. japonica
           GN=Os03g0301500 PE=4 SV=1
          Length = 457

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 398 GLFPFRLWILAPEVCLYKPMACIRSFLGVGQALGYPS 288
           G FP   W  + E  L  P +C+    GVG A G+PS
Sbjct: 147 GGFPSLPWASSLERLLTSPSSCVSDSRGVGNADGFPS 183


>sp|O76198|TX21A_PHONI Neurotoxin Pn2-1A OS=Phoneutria nigriventer
           PE=2 SV=1
          Length = 115

 Score = 30.4 bits (67), Expect = 9.3
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +1

Query: 88  SCRGLDFPFVI*AVCKETCTCGSKRGE---SSSVPGLPI*ITKIGYSWFS 228
           +C G D P      CKETC C  +RGE   + S  G    I + GY W +
Sbjct: 63  TCAGQDKP------CKETCDCCGERGECVCALSYEGKYRCICRQGYVWIA 106
tr_hit_id Q9RXQ4
Definition tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans
Align length 48
Score (bit) 51.2
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949897|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_D12, 5'
         (688 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deino...    51   2e-06
tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deino...    51   2e-06
tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkh...    51   8e-05
tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea ...    47   0.001
tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa s...    41   0.062
tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medic...    39   0.24 
tr|Q584W9|Q584W9_9TRYP Putative uncharacterized protein OS=Trypa...    38   0.69 
tr|A1HM07|A1HM07_9FIRM Putative uncharacterized protein OS=Therm...    37   1.2  
tr|Q9RZ79|Q9RZ79_DEIRA Transposase, putative OS=Deinococcus radi...    35   3.4  
tr|B6TC87|B6TC87_MAIZE Putative uncharacterized protein OS=Zea m...    34   7.7  
tr|B4FEL6|B4FEL6_MAIZE Putative uncharacterized protein OS=Zea m...    34   7.7  

>tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein
           OS=Deinococcus radiodurans GN=DR_0254 PE=4 SV=1
          Length = 139

 Score = 51.2 bits (121), Expect(2) = 2e-06
 Identities = 26/48 (54%), Positives = 31/48 (64%)
 Frame = -3

Query: 551 APRHFQCHEARPVSYYAFFERWLLPSPPPGCHRLITSFSTK*LLKDLS 408
           +P HF+    RPVSYYA FE WLL S PPGC    TS +T+   +DLS
Sbjct: 92  SPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDDTSLTTERSFRDLS 139



 Score = 23.5 bits (49), Expect(2) = 2e-06
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 621 TERSATDT*KSFFQGLVASVSHLSPETF 538
           TERS T    S  +  +ASV HLSP+ F
Sbjct: 70  TERSPTRQLASRVES-IASVDHLSPDHF 96


>tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein
           OS=Deinococcus radiodurans GN=DR_2252 PE=4 SV=1
          Length = 133

 Score = 51.2 bits (121), Expect(2) = 2e-06
 Identities = 26/48 (54%), Positives = 31/48 (64%)
 Frame = -3

Query: 551 APRHFQCHEARPVSYYAFFERWLLPSPPPGCHRLITSFSTK*LLKDLS 408
           +P HF+    RPVSYYA FE WLL S PPGC    TS +T+   +DLS
Sbjct: 86  SPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDDTSLTTERSFRDLS 133



 Score = 23.5 bits (49), Expect(2) = 2e-06
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 621 TERSATDT*KSFFQGLVASVSHLSPETF 538
           TERS T    S  +  +ASV HLSP+ F
Sbjct: 64  TERSPTRQLASRVES-IASVDHLSPDHF 90


>tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein
           OS=Burkholderia multivorans (strain ATCC 17616 / 249)
           GN=BMULJ_05092 PE=4 SV=1
          Length = 123

 Score = 50.8 bits (120), Expect = 8e-05
 Identities = 38/86 (44%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = -3

Query: 686 THVSILTSGTSQVLSPTTFLD*QNVPLLTLEKASFKVSSLR*VT*-APRHFQCHEARPVS 510
           THVSI TS TS  L         +    TL   + K +S   V   AP H      R VS
Sbjct: 43  THVSIRTSDTSSTLYKAP-----SQAYGTLSYHACKHASAASVYGLAPLHLPRRTTRSVS 97

Query: 509 YYAFFERWLLPSPPPGCHRLITSFST 432
           YYAFF+ WLL S PP C  L TSF T
Sbjct: 98  YYAFFKGWLLLSQPPDCFSLPTSFPT 123


>tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea
           PE=2 SV=1
          Length = 182

 Score = 46.6 bits (109), Expect = 0.001
 Identities = 32/77 (41%), Positives = 39/77 (50%)
 Frame = -2

Query: 687 YSCQHSHFWYLPGVVTNNFP*LTERSATDT*KSFFQGLVASVSHLSPETFSVP*S*TSEL 508
           YSC HSHF  L   + + F  +         +   + L      LSP T S P   TSEL
Sbjct: 101 YSCHHSHFRTLQPSLQSTFTAVRNAPLPLQAEPVIRSLGVL---LSPVTLSAPDHSTSEL 157

Query: 507 LRFL*KMAASKPTPWLS 457
           LR L ++AASKPT WLS
Sbjct: 158 LRTLSRVAASKPTSWLS 174


>tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa
           subsp. indica PE=4 SV=1
          Length = 109

 Score = 41.2 bits (95), Expect = 0.062
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
 Frame = +1

Query: 217 SWFSAKSIEVERITFMA*GRALNGLG*PKA*PTPRKL------RIQAMGLYRQTSGAKIQ 378
           SWFS K +E +++T     +   G G      + + L      +I  +    +T G K+ 
Sbjct: 8   SWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVRSASETMGDKLH 67

Query: 379 SRKGNSPDRTLRSLSNHLVEKEVIKR*QP 465
            R+GNSPD  LR L++  V KEV  + QP
Sbjct: 68  RREGNSPDHQLRPLNDRSVIKEVGVQRQP 96


>tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=4 SV=1
          Length = 102

 Score = 39.3 bits (90), Expect = 0.24
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
 Frame = +1

Query: 217 SWFSAKSIEVERITFMA*GRALNGLG*PKA*PTPRKLRIQAMGLYRQTS---GAKIQSRK 387
           SWFS K +E +++T     +   G G      + + L  +     +  S   G K+  R+
Sbjct: 8   SWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYPWRVKSASEAMGDKLHRRE 67

Query: 388 GNSPDRTLRSLSNHLVEKEVIKR*QP 465
           GNSPD  LR L++  V KEV  + QP
Sbjct: 68  GNSPDHQLRPLNDRSVIKEVGVQRQP 93


>tr|Q584W9|Q584W9_9TRYP Putative uncharacterized protein
           OS=Trypanosoma brucei GN=Tb927.6.3260 PE=4 SV=1
          Length = 376

 Score = 37.7 bits (86), Expect = 0.69
 Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
 Frame = -3

Query: 488 WLLPSPPPGCHRLITSFSTK*LLKDLSVRSGLFPFRLWILAPEVCLYKPMACIRSFLGV- 312
           W +PSP P    LI S +T    ++ SV   L   RL   AP     +   C  S LG+ 
Sbjct: 173 WRIPSPNPKTSPLIDSNTTP---RENSVIELL---RLRATAPVPINTRSDRCGGSLLGMG 226

Query: 311 ----GQALGYPSPLSALPQAINVIRSTSIDFAENQL-YPILVIQIG----KPGTEELSPL 159
               G A   PSPL A  Q  + + ST + F  N +  P+L +          T++  PL
Sbjct: 227 SDSAGSARSVPSPLFAPSQMPSSVGSTRLSFTNNPMKSPMLQVSYNPLPCATNTDDSFPL 286

Query: 158 FEPHVQVSL 132
           F P  Q  +
Sbjct: 287 FRPLPQADI 295


>tr|A1HM07|A1HM07_9FIRM Putative uncharacterized protein
           OS=Thermosinus carboxydivorans Nor1 GN=TcarDRAFT_0446
           PE=4 SV=1
          Length = 36

 Score = 37.0 bits (84), Expect = 1.2
 Identities = 22/39 (56%), Positives = 25/39 (64%)
 Frame = +2

Query: 434 WKRK*SSDDNQGVGLEAAIFQRKRNSSLV*LHGTENVSG 550
           W+ K    +NQ VGLEAAI QR RNSSLV     E+V G
Sbjct: 2   WRYK----NNQDVGLEAAIIQRVRNSSLVEWRCAEDVRG 36


>tr|Q9RZ79|Q9RZ79_DEIRA Transposase, putative OS=Deinococcus
           radiodurans GN=DR_A0075 PE=4 SV=1
          Length = 709

 Score = 35.4 bits (80), Expect = 3.4
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
 Frame = -3

Query: 344 PMACIRSFLGVGQALGYPSPLSALPQAIN--------VIRSTSIDFAENQLYPILVIQIG 189
           P +C+   LG G +   PSP+S    +++         + S S D     L P   + + 
Sbjct: 68  PSSCLHQILGDGDSPLSPSPVSITTSSLHQLPKLSAQTVESVSSDGDVADLSPSQNMMVT 127

Query: 188 KPGTEELSPLFEPHVQVSLHTAQMTNGKSRPRQLLVPAFQEPLGA 54
            PG +  + L   H  +S  T   T       + L+P  Q P+G+
Sbjct: 128 APGFDPAAILLTQHGDLSGGTYTDTGDALEKHRELLPVLQTPVGS 172


>tr|B6TC87|B6TC87_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 480

 Score = 34.3 bits (77), Expect = 7.7
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = -3

Query: 395 LFPFRLWILAPEVCLYKPMACIRSFLGVGQALGYPSPLSALPQAINVIRSTSIDFAENQL 216
           L PF+  +   E C  + +A +  F+G   AL Y  P  ++ +AI+ +++  +   +++L
Sbjct: 254 LVPFKNAVPVEE-CSLEGVAGLIRFIGSVSALAYLGPKESISEAISDLKADIVTSLKSRL 312

Query: 215 YPILVIQIGKPGTEEL--SPLFEPHVQVSLHTAQMTNGKSRPRQLLVP 78
             IL      P T E+  SP  +   QV  H  +     S PR++L+P
Sbjct: 313 DIILDEADDGPATAEVEKSP-SQKATQVIFHELREPYSFSFPRRVLIP 359