DK949829
Clone id TST38A01NGRL0007_A15
Library
Length 656
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_A15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
AATACGAAAAACGAAGAAGTCAAAGAAGAGATCGCCTCTTTTTTTGTACCGGCTGGCAGT
CAGCCCGAATCTGTCTCTGTAGTTCCACTGGTTTCCGCATGGATCTATGAATCCTAAATC
CCTGTCAATGATAATACAGGAATATTACACACCTGCTACGGCCTATCCGTGTCATATAGA
AGAAAACTAACAAAAACTATTATTCCCCATAAGAACAGCATGCTCATTCGCCAAAGATGA
CTGACTACAATTGCACGTCTTGGCGATCACGGACCTTCTACCCAATACGATCGCAGATGT
TTATATGGATTTAGACATACCAGGGCTATTATCGATTTCGAAAAAACACTTTTCTTATTG
AACATTGCTTGTGATATGATTAAATCTATGATGTCACCCCGGAGGCCATTTACTGTTAGT
AAATACTGATCCTTTATGACATGAACTAGTAACAAAGATGGCCAACAAGACCGATCGGAA
TTATATCTAATTCTACCTGGATTGGTGGTTTTTTAACTCACTGGGAACATATGAGATATG
AGAAACACTTCTAATCTTCATCCACGCAGCACTCTAGCCCACGTTTATTATAGATGCTGA
GATATTTTGAGGGACTGACAACACGCCAAATTCCACATGGTTTGGTTATATTGAAT
■■Homology search results ■■ -
sp_hit_id P26864
Definition sp|P26864|RT02_MARPO Ribosomal protein S2, mitochondrial OS=Marchantia polymorpha
Align length 65
Score (bit) 48.1
E-value 1.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949829|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_A15, 5'
(656 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P26864|RT02_MARPO Ribosomal protein S2, mitochondrial OS=Marc... 48 1e-18
sp|A8F717|RS2_THELT 30S ribosomal protein S2 OS=Thermotoga letti... 32 0.36
sp|P35014|RR2_GALSU 30S ribosomal protein S2, chloroplastic OS=G... 29 0.37
sp|P14963|EF1A_EUGGR Elongation factor 1-alpha OS=Euglena gracil... 32 2.2
sp|A9ISJ8|RS2_BART1 30S ribosomal protein S2 OS=Bartonella tribo... 25 2.5
sp|Q6FZN0|RS2_BARQU 30S ribosomal protein S2 OS=Bartonella quint... 25 2.5
sp|Q9GCB9|RT02_ARATH Ribosomal protein S2, mitochondrial OS=Arab... 28 3.6
sp|Q8G0D6|RS2_BRUSU 30S ribosomal protein S2 OS=Brucella suis GN... 24 5.3
sp|B0CGV9|RS2_BRUSI 30S ribosomal protein S2 OS=Brucella suis (s... 24 5.3
sp|A5VQT3|RS2_BRUO2 30S ribosomal protein S2 OS=Brucella ovis (s... 24 5.3
sp|A9M5H4|RS2_BRUC2 30S ribosomal protein S2 OS=Brucella canis (... 24 5.3
sp|Q57CX7|RS2_BRUAB 30S ribosomal protein S2 OS=Brucella abortus... 24 5.3
sp|Q2YRJ1|RS2_BRUA2 30S ribosomal protein S2 OS=Brucella abortus... 24 5.3
sp|O67809|RS2_AQUAE 30S ribosomal protein S2 OS=Aquifex aeolicus... 26 5.9
sp|P56351|RR2_CHLVU 30S ribosomal protein S2, chloroplastic OS=C... 25 5.9
sp|A6MVX1|RR2_RHDSA 30S ribosomal protein S2, chloroplastic OS=R... 25 5.9
sp|Q6G5C9|RS2_BARHE 30S ribosomal protein S2 OS=Bartonella hense... 25 6.7
sp|A7HMF2|RS2_FERNB 30S ribosomal protein S2 OS=Fervidobacterium... 26 7.6
sp|Q9MUS8|RR2_MESVI 30S ribosomal protein S2, chloroplastic OS=M... 25 7.7
sp|Q0H8Y1|AI5_USTMA Probable intron-encoded endonuclease aI5 OS=... 30 8.5
sp|Q5HB22|RS2_EHRRW 30S ribosomal protein S2 OS=Ehrlichia rumina... 27 9.6
sp|Q5FGZ8|RS2_EHRRG 30S ribosomal protein S2 OS=Ehrlichia rumina... 27 9.6
sp|Q1XDN8|RR2_PORYE 30S ribosomal protein S2, chloroplastic OS=P... 24 9.8
sp|O78482|RR2_GUITH 30S ribosomal protein S2, chloroplastic OS=G... 25 9.8

>sp|P26864|RT02_MARPO Ribosomal protein S2, mitochondrial
OS=Marchantia polymorpha GN=RPS2 PE=3 SV=2
Length = 237

Score = 48.1 bits (113), Expect(3) = 1e-18
Identities = 26/65 (40%), Positives = 43/65 (66%)
Frame = +1

Query: 208 HKNSMLIRQR*LTTIARLGDHGPSTQYDRRCLYGFRHTRAIIDFEKTLFLLNIACDMIKS 387
+ +++L+ Q+ L+T A LG P++ + + LYGFR+ AIID EKTL L C++I S
Sbjct: 2 YNSNLLVIQKLLSTNAYLGHRIPTSDF-QGYLYGFRNEMAIIDLEKTLICLRRTCNLIGS 60

Query: 388 MMSPR 402
++S +
Sbjct: 61 IISAK 65



Score = 48.1 bits (113), Expect(3) = 1e-18
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 13/69 (18%)
Frame = +3

Query: 489 NSTWIGGFLTHWEHM-RYEKHF------------*SSSTQHSSPRLL*MLRYFEGLTTRQ 629
N WIGGFLT+W+HM + +KHF +SS PR M + FEG+ T
Sbjct: 94 NHKWIGGFLTNWKHMKKVKKHFQDFSAHPNLKDAFTSSPFDYFPRFKKMQKCFEGIMTHN 153

Query: 630 IPHGLVILN 656
IP LVI+N
Sbjct: 154 IPDCLVIIN 162



Score = 36.2 bits (82), Expect(3) = 1e-18
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2

Query: 404 GHLLLVNTDPL*HELVTKMANKTDRNYI 487
GHLLLVNT+P ++++ +MA KT+++YI
Sbjct: 66 GHLLLVNTNPEYNKIIQQMAKKTNQSYI 93


>sp|A8F717|RS2_THELT 30S ribosomal protein S2 OS=Thermotoga
lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)
GN=rpsB PE=3 SV=1
Length = 266

Score = 32.3 bits (72), Expect(2) = 0.36
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1

Query: 301 LYGFRHTRAIIDFEKTLFLLNIACDMIKSMMS 396
+YG R IID +KTL L+ ACD +KS S
Sbjct: 31 IYGARKGIYIIDLQKTLKLVEEACDFVKSKAS 62



Score = 20.8 bits (42), Expect(2) = 0.36
Identities = 5/16 (31%), Positives = 13/16 (81%)
Frame = +3

Query: 489 NSTWIGGFLTHWEHMR 536
N+ W+GG +T+++ ++
Sbjct: 93 NNRWLGGLITNFKTIK 108


>sp|P35014|RR2_GALSU 30S ribosomal protein S2, chloroplastic
OS=Galdieria sulphuraria GN=rps2 PE=3 SV=1
Length = 233

Score = 28.9 bits (63), Expect(2) = 0.37
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1

Query: 301 LYGFRHTRAIIDFEKTLFLLNIACDMIKSMMSPRRPF 411
+Y R+ IID +T FLL ACD +K + + F
Sbjct: 33 IYAERNKVHIIDLVQTAFLLGEACDYVKLLAKKGKKF 69



Score = 24.3 bits (51), Expect(2) = 0.37
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3

Query: 489 NSTWIGGFLTHW 524
N W+GG LT+W
Sbjct: 95 NQRWLGGLLTNW 106


>sp|P14963|EF1A_EUGGR Elongation factor 1-alpha OS=Euglena gracilis
GN=TEF PE=2 SV=1
Length = 445

Score = 32.3 bits (72), Expect = 2.2
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1

Query: 13 EEVKEEIASFFVPAGSQPESVSVVPLVSAWIYES*IPVNDNTG 141
EE+K+E++ + G PE V +P +S W ++ I ++N G
Sbjct: 168 EEIKKEVSGYLKKVGYNPEKVPFIP-ISGWNGDNMIEASENMG 209


>sp|A9ISJ8|RS2_BART1 30S ribosomal protein S2 OS=Bartonella
tribocorum (strain CIP 105476 / IBS 506) GN=rpsB PE=3
SV=2
Length = 266

Score = 25.4 bits (54), Expect(3) = 2.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3

Query: 489 NSTWIGGFLTHWEHMRYEKH 548
N+ W+GG LT+W+ + H
Sbjct: 95 NARWLGGMLTNWKTISNSIH 114



Score = 21.9 bits (45), Expect(3) = 2.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2

Query: 401 GGHLLLVNTDPL*HELVTKMANKTDRNYI 487
GG +L V T E++ AN++ + Y+
Sbjct: 66 GGRILFVGTKRQASEIIADAANRSAQYYV 94



Score = 21.2 bits (43), Expect(3) = 2.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1

Query: 301 LYGFRHTRAIIDFEKTLFLLNIACDMIKSMMS 396
+YG R+ IID +T+ LL+ A ++ ++
Sbjct: 33 IYGQRNNIHIIDLAQTVPLLHQALKLVSDTVA 64


>sp|Q6FZN0|RS2_BARQU 30S ribosomal protein S2 OS=Bartonella quintana
GN=rpsB PE=3 SV=1
Length = 257

Score = 25.4 bits (54), Expect(3) = 2.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3

Query: 489 NSTWIGGFLTHWEHMRYEKH 548
N+ W+GG LT+W+ + H
Sbjct: 95 NARWLGGMLTNWKTISNSIH 114



Score = 22.3 bits (46), Expect(3) = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1

Query: 295 RCLYGFRHTRAIIDFEKTLFLLNIACDMIKSMMS 396
R +YG R+ IID +T+ LL+ A ++ ++
Sbjct: 31 RYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVA 64



Score = 20.8 bits (42), Expect(3) = 2.5
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2

Query: 401 GGHLLLVNTDPL*HELVTKMANKTDRNYI 487
GG +L V T +++ AN++ + Y+
Sbjct: 66 GGRILFVGTKRQASDIIADAANRSAQYYV 94


>sp|Q9GCB9|RT02_ARATH Ribosomal protein S2, mitochondrial
OS=Arabidopsis thaliana GN=RPS2 PE=2 SV=1
Length = 219

Score = 27.7 bits (60), Expect(2) = 3.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1

Query: 232 QR*LTTIARLGDHGPSTQYDRRCLYGFRHTRAIIDFEKTLFLLNIACDMIKSMMSPR 402
Q+ L T A LG + ++ YG R+ IID +KTL L A + ++ R
Sbjct: 9 QKLLNTGAHLGRRAAEHHF-KQYAYGTRNGMTIIDSDKTLICLRSAAHFVANLAHMR 64



Score = 21.9 bits (45), Expect(2) = 3.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2

Query: 395 HPGGHLLLVNTDPL*HELV 451
H G++ VNT+PL E++
Sbjct: 62 HMRGNIFFVNTNPLFDEII 80


>sp|Q8G0D6|RS2_BRUSU 30S ribosomal protein S2 OS=Brucella suis
GN=rpsB PE=3 SV=1
Length = 256

Score = 24.3 bits (51), Expect(3) = 5.3
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3

Query: 489 NSTWIGGFLTHWE 527
N+ W+GG +T+W+
Sbjct: 95 NARWLGGMMTNWK 107



Score = 22.7 bits (47), Expect(3) = 5.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1

Query: 301 LYGFRHTRAIIDFEKTLFLLNIACDMIKSMMS 396
+YG R+ I+D +T+ LLN A ++ ++
Sbjct: 33 IYGERNNIHILDLSQTVPLLNSALKVVSDTVA 64



Score = 20.4 bits (41), Expect(3) = 5.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2

Query: 401 GGHLLLVNTDPL*HELVTKMANKTDRNYI 487
GG +L V T +++ AN++ + Y+
Sbjct: 66 GGRVLFVGTKRQASDIIADAANRSAQYYV 94


>sp|B0CGV9|RS2_BRUSI 30S ribosomal protein S2 OS=Brucella suis
(strain ATCC 23445 / NCTC 10510) GN=rpsB PE=3 SV=1
Length = 256

Score = 24.3 bits (51), Expect(3) = 5.3
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3

Query: 489 NSTWIGGFLTHWE 527
N+ W+GG +T+W+
Sbjct: 95 NARWLGGMMTNWK 107



Score = 22.7 bits (47), Expect(3) = 5.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1

Query: 301 LYGFRHTRAIIDFEKTLFLLNIACDMIKSMMS 396
+YG R+ I+D +T+ LLN A ++ ++
Sbjct: 33 IYGERNNIHILDLSQTVPLLNSALKVVSDTVA 64



Score = 20.4 bits (41), Expect(3) = 5.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2

Query: 401 GGHLLLVNTDPL*HELVTKMANKTDRNYI 487
GG +L V T +++ AN++ + Y+
Sbjct: 66 GGRVLFVGTKRQASDIIADAANRSAQYYV 94


>sp|A5VQT3|RS2_BRUO2 30S ribosomal protein S2 OS=Brucella ovis
(strain ATCC 25840 / 63/290 / NCTC 10512) GN=rpsB PE=3
SV=1
Length = 254

Score = 24.3 bits (51), Expect(3) = 5.3
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3

Query: 489 NSTWIGGFLTHWE 527
N+ W+GG +T+W+
Sbjct: 93 NARWLGGMMTNWK 105



Score = 22.7 bits (47), Expect(3) = 5.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1

Query: 301 LYGFRHTRAIIDFEKTLFLLNIACDMIKSMMS 396
+YG R+ I+D +T+ LLN A ++ ++
Sbjct: 31 IYGERNNIHILDLSQTVPLLNSALKVVSDTVA 62



Score = 20.4 bits (41), Expect(3) = 5.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2

Query: 401 GGHLLLVNTDPL*HELVTKMANKTDRNYI 487
GG +L V T +++ AN++ + Y+
Sbjct: 64 GGRVLFVGTKRQASDIIADAANRSAQYYV 92


tr_hit_id Q1XGC8
Definition tr|Q1XGC8|Q1XGC8_PHYPA Ribosomal protein S2 OS=Physcomitrella patens
Align length 68
Score (bit) 48.9
E-value 3.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949829|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_A15, 5'
(656 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1XGC8|Q1XGC8_PHYPA Ribosomal protein S2 OS=Physcomitrella pa... 49 3e-16
tr|Q7YAL1|Q7YAL1_CHAVU Ribosomal protein S2 OS=Chara vulgaris GN... 45 5e-14
tr|Q8M1D9|Q8M1D9_CHAGL Ribosomal protein S2 OS=Chaetosphaeridium... 33 0.001
tr|Q9TCC3|Q9TCC3_NEPOL Ribosomal protein S2 OS=Nephroselmis oliv... 30 0.010
tr|A7P1N4|A7P1N4_VITVI Chromosome chr19 scaffold_4, whole genome... 35 3.1
tr|Q9NAR6|Q9NAR6_9TURB Putative elongation factor 1-alpha (Fragm... 35 3.1
tr|A6YEB6|A6YEB6_CHLAT Ribosomal protein S2 OS=Chlorokybus atmop... 27 4.7
tr|Q6PTJ9|Q6PTJ9_METSE Elongation factor 1-alpha (Fragment) OS=M... 34 6.9
tr|A6VZC6|A6VZC6_MARMS Pseudouridine synthase OS=Marinomonas sp.... 34 9.0

>tr|Q1XGC8|Q1XGC8_PHYPA Ribosomal protein S2 OS=Physcomitrella
patens GN=rps2 PE=3 SV=1
Length = 241

Score = 48.9 bits (115), Expect(3) = 3e-16
Identities = 27/68 (39%), Positives = 45/68 (66%)
Frame = +1

Query: 208 HKNSMLIRQR*LTTIARLGDHGPSTQYDRRCLYGFRHTRAIIDFEKTLFLLNIACDMIKS 387
+ +S+L+ Q+ L+T A LG P++ + + LYGFR+ AII+ EKTL L AC++I+S
Sbjct: 2 YNSSLLVIQKLLSTNAYLGHRIPTSDF-QGYLYGFRNEMAIINLEKTLICLRRACNLIES 60

Query: 388 MMSPRRPF 411
++ + F
Sbjct: 61 IIRAKGHF 68



Score = 42.0 bits (97), Expect(3) = 3e-16
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 14/70 (20%)
Frame = +3

Query: 489 NSTWIGGFLTHWEHMR-YEKHF*SSSTQHSS-------------PRLL*MLRYFEGLTTR 626
N WIGGFLT+ +HM+ +KHF + + HS P M + FEG+ T
Sbjct: 94 NHKWIGGFLTNRKHMKNVQKHF-QNFSAHSKLKDASTSSPFDFFPHFRKMQKCFEGIMTH 152

Query: 627 QIPHGLVILN 656
IP LVI+N
Sbjct: 153 DIPDCLVIIN 162



Score = 37.0 bits (84), Expect(3) = 3e-16
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +2

Query: 404 GHLLLVNTDPL*HELVTKMANKTDRNYI 487
GH LLVNTDP +++V +MA KT+++YI
Sbjct: 66 GHFLLVNTDPEYNKIVQQMAKKTNQSYI 93


>tr|Q7YAL1|Q7YAL1_CHAVU Ribosomal protein S2 OS=Chara vulgaris
GN=rps2 PE=3 SV=1
Length = 225

Score = 45.1 bits (105), Expect(3) = 5e-14
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 12/68 (17%)
Frame = +3

Query: 489 NSTWIGGFLTHWEHM----RYEKHF*SSS------TQH--SSPRLL*MLRYFEGLTTRQI 632
N WIGGFLT+W+H+ + +HF + S QH PR M + FEG+ T I
Sbjct: 93 NHKWIGGFLTNWKHIFHVQAHFQHFENLSLKALDTAQHIRKVPRYKKMKKCFEGIVTNDI 152

Query: 633 PHGLVILN 656
P LVI+N
Sbjct: 153 PDCLVIMN 160



Score = 42.0 bits (97), Expect(3) = 5e-14
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +1

Query: 214 NSMLIRQR*LTTIARLGDHGPSTQYDRRCLYGFRHTRAIIDFEKTLFLLNIACDMIK 384
NS + QR L+T A G+ P++ + + LYG R+ AIID E+TL L AC+ I+
Sbjct: 3 NSEKVIQRLLSTKAHFGNRTPTSDF-QPYLYGLRNEIAIIDLERTLLYLRRACNFIE 58



Score = 33.1 bits (74), Expect(3) = 5e-14
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +2

Query: 404 GHLLLVNTDPL*HELVTKMANKTDRNYI 487
GH+L VNT+P ++++ KMA +T ++YI
Sbjct: 65 GHILFVNTNPQNNQIIQKMAKETCQSYI 92


>tr|Q8M1D9|Q8M1D9_CHAGL Ribosomal protein S2 OS=Chaetosphaeridium
globosum GN=rps2 PE=3 SV=1
Length = 191

Score = 33.5 bits (75), Expect(2) = 0.001
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1

Query: 211 KNSMLIRQR*LTTIARLGDHGPSTQY-DRRCLYGFR-HTRAIIDFEKTLFLLNIACDMIK 384
+++ L+ + L A LG T + R LYG R +TRAI D EKTL + AC ++
Sbjct: 3 QSNSLVISKLLKINAHLGRPKLRTSHVSRYFLYGLRSNTRAIFDLEKTLTCIRRACHFLE 62

Query: 385 SMM 393
S++
Sbjct: 63 SIL 65



Score = 31.6 bits (70), Expect(2) = 0.001
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3

Query: 498 WIGGFLTHWEHMRYEKH 548
WIGG LT+W+H+ Y H
Sbjct: 102 WIGGLLTNWKHISYYNH 118


>tr|Q9TCC3|Q9TCC3_NEPOL Ribosomal protein S2 OS=Nephroselmis
olivacea GN=rps2 PE=3 SV=1
Length = 235

Score = 30.4 bits (67), Expect(3) = 0.010
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Frame = +3

Query: 489 NSTWIGGFLTHW-----EHMRYEK-----HF*SSSTQHSSPRLL*MLRYFEGLTTR-QIP 635
N+ W+GG LT+W E Y+K H +S S+PR M + F+G T P
Sbjct: 103 NNRWVGGTLTNWPIISKEIETYKKVVTQLHLYTSLFYVSTPRYEKMKKSFQGFQTPISKP 162

Query: 636 HGLVILN 656
L++LN
Sbjct: 163 DLLIVLN 169



Score = 29.6 bits (65), Expect(3) = 0.010
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +2

Query: 404 GHLLLVNTDPL*HELVTKMANKTDRNYI 487
GH+L +N++PL ++L+ K T+++Y+
Sbjct: 75 GHILFINSNPLYNKLLQKTCELTEQSYV 102



Score = 20.8 bits (42), Expect(3) = 0.010
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1

Query: 301 LYGFRHTRAIIDFEKTLFLLNIACDMIKSMMSPR 402
L R+ I+D KT+ L A D+I S++S +
Sbjct: 41 LIASRNAVYILDISKTIKGLFNALDVISSIVSQK 74


>tr|A7P1N4|A7P1N4_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027688001
PE=3 SV=1
Length = 221

Score = 35.4 bits (80), Expect = 3.1
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +1

Query: 223 LIRQR*LTTIARLGDHGPSTQYDRRCLYGFRHTRAIIDFEKTLFLLNIACDMIKSMMSPR 402
L+ Q+ L+T A +G + + YGFR+ A+ID +KTL + ACD + S++ +
Sbjct: 6 LVIQKLLSTNAHMGRRLVEHHF-KVYTYGFRNGCAVIDSDKTLICMRNACDFMASLVRQK 64

Query: 403 RPF 411
F
Sbjct: 65 GRF 67


>tr|Q9NAR6|Q9NAR6_9TURB Putative elongation factor 1-alpha
(Fragment) OS=Crenobia alpina GN=ef1a PE=4 SV=1
Length = 333

Score = 35.4 bits (80), Expect = 3.1
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1

Query: 4 TKNEEVKEEIASFFVPAGSQPESVSVVPLVSAWIYES*IPVNDN 135
T+ EE+K+E++S+ G PESV+ VP +S W ++ I + N
Sbjct: 121 TRYEEIKKEVSSYIKKVGYNPESVAFVP-ISGWAGDNMIEESKN 163


>tr|A6YEB6|A6YEB6_CHLAT Ribosomal protein S2 OS=Chlorokybus
atmophyticus GN=rps2 PE=4 SV=1
Length = 442

Score = 27.3 bits (59), Expect(2) = 4.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2

Query: 404 GHLLLVNTDPL*HELVTKMANKTDRNYI 487
GH+L NT+P +++V A TD++Y+
Sbjct: 280 GHILFFNTNPEYNKIVRLAAKLTDQSYL 307



Score = 25.4 bits (54), Expect(2) = 4.7
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3

Query: 489 NSTWIGGFLTHWEHM 533
N+ W+GG LT+W+ +
Sbjct: 308 NNKWLGGLLTNWKEI 322


>tr|Q6PTJ9|Q6PTJ9_METSE Elongation factor 1-alpha (Fragment)
OS=Metridium senile PE=2 SV=1
Length = 416

Score = 34.3 bits (77), Expect = 6.9
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1

Query: 13 EEVKEEIASFFVPAGSQPESVSVVPLVSAWIYES*IPVNDN 135
EE+K+E+++F G P+SV+ VP +S W+ ++ I + N
Sbjct: 152 EEIKKEVSTFLKKTGYNPKSVAFVP-ISGWVGDNMIEASTN 191


>tr|A6VZC6|A6VZC6_MARMS Pseudouridine synthase OS=Marinomonas sp.
(strain MWYL1) GN=Mmwyl1_2893 PE=3 SV=1
Length = 212

Score = 33.9 bits (76), Expect = 9.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3

Query: 459 WPTRPIGIISNSTWIGGFLTHWEHMRYEKH 548
WP RP II W +T+WE M YE +
Sbjct: 114 WPNRPRQIICTDEWSKDSITYWEKMAYENN 143