DK949826
Clone id TST38A01NGRL0007_A12
Library
Length 610
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_A12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GACAGGAGTTCAAAATTACAACAATTTTGGTTTTCAATTCCATACACAATTCTCAAGGCT
CTCAAAAGCATTAAGTTCGGACCGTCTTCGAAAAAAAACAGGAAAAAATTGCCCTCGGCT
GCCTAGAGAAGGCAGTGTTCAACAGAAGGATCAAGGTAATTTGCAATGGAGGTGTTACAA
GTTTTGGCAGAAAGAAAAAAGAGGAAAACAGGCTTGGCCCATTGGGATAAATACAAGACA
TTGCAAAAGCTTAATGAGAAGCGATGTGTGTGGAACAAGGCACAGCGAGTGGGCAGTAGC
CACGGTGGTCTGTCGTATGAATGCAGTCGATTCTTTTTGCTGCATTGTAAGGATAAGGAT
CTTGTGTTAGGAAAGTGCCTCTATCAGAGAAAATTAAAGGAATCCTTGCTAGAGTGGCTT
TTGAGCACAGTAAGTTTGGGCTTATACAGAGAAGTTAAAATAGCTACATTTGTCAACTAG
CAAGGTGGATACAACTCTTTGCAATACAAGCAGAGTGATGGGCTTTGCTTTCTAGTGAAA
ATGTGGGCTCCCTAAATGCCATGCCTATGGGATCGAAGGGGGTTGATAAAAAAAAAAAAA
AAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949826|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_A12, 5'
(587 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B3MMC1
Definition tr|B3MMC1|B3MMC1_DROAN GF15566 OS=Drosophila ananassae
Align length 99
Score (bit) 35.8
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949826|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_A12, 5'
(587 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3MMC1|B3MMC1_DROAN GF15566 OS=Drosophila ananassae GN=GF1556... 36 1.8
tr|Q8P3X9|Q8P3X9_XANCP Putative uncharacterized protein XCC3939 ... 35 4.1
tr|Q4UPF7|Q4UPF7_XANC8 Putative uncharacterized protein OS=Xanth... 35 4.1
tr|B0RXV9|B0RXV9_XANCB Putative uncharacterized protein OS=Xanth... 35 4.1
tr|A0EE02|A0EE02_PARTE Chromosome undetermined scaffold_90, whol... 34 7.0

>tr|B3MMC1|B3MMC1_DROAN GF15566 OS=Drosophila ananassae GN=GF15566
PE=4 SV=1
Length = 1160

Score = 35.8 bits (81), Expect = 1.8
Identities = 27/99 (27%), Positives = 43/99 (43%)
Frame = +2

Query: 17 YNNFGFQFHTQFSRLSKALSSDRLRKKTGKNCPRLPREGSVQQKDQGNLQWRCYKFWQKE 196
YN+ G++ + QF + + T N PRLP QQ+ QG LQ Q+
Sbjct: 614 YNSIGYKPYPQFKKSAST--------GTFLNVPRLP-----QQQQQGYLQ-------QEP 653

Query: 197 KRGKQAWPIGINTRHCKSLMRSDVCGTRHSEWAVATVVC 313
+ +Q+ P+G+ T+ L R H + + V C
Sbjct: 654 PQMQQSLPLGLTTQQLLQLSRQQQTPPTHQQQHQSAVAC 692


>tr|Q8P3X9|Q8P3X9_XANCP Putative uncharacterized protein XCC3939
OS=Xanthomonas campestris pv. campestris GN=XCC3939 PE=4
SV=1
Length = 251

Score = 34.7 bits (78), Expect = 4.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3

Query: 330 STAFIRQTTVATAHSLCLVPHTSLLIKLLQCLVFIPMGQA 211
+T F++Q T++ H L L PH ++L+ CL + +G A
Sbjct: 42 TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81


>tr|Q4UPF7|Q4UPF7_XANC8 Putative uncharacterized protein
OS=Xanthomonas campestris pv. campestris (strain 8004)
GN=XC_4027 PE=4 SV=1
Length = 251

Score = 34.7 bits (78), Expect = 4.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3

Query: 330 STAFIRQTTVATAHSLCLVPHTSLLIKLLQCLVFIPMGQA 211
+T F++Q T++ H L L PH ++L+ CL + +G A
Sbjct: 42 TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81


>tr|B0RXV9|B0RXV9_XANCB Putative uncharacterized protein
OS=Xanthomonas campestris pv. campestris (strain B100)
GN=xcc-b100_4126 PE=4 SV=1
Length = 251

Score = 34.7 bits (78), Expect = 4.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3

Query: 330 STAFIRQTTVATAHSLCLVPHTSLLIKLLQCLVFIPMGQA 211
+T F++Q T++ H L L PH ++L+ CL + +G A
Sbjct: 42 TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81


>tr|A0EE02|A0EE02_PARTE Chromosome undetermined scaffold_90, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00025863001 PE=3 SV=1
Length = 1139

Score = 33.9 bits (76), Expect = 7.0
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -1

Query: 299 LLPTRCALFHTHRF---SLSFCNVLYL-SQWAKPVFLFFLSAKTCNTSIANYL 153
++P+R +LF T F SL C +LYL ++W +FLFF + K S ++L
Sbjct: 29 IIPSRISLFKTIVFAFLSLITCGLLYLVTRWDLRIFLFFRAKKCVPNSATHFL 81