DK949605 |
Clone id |
TST38A01NGRL0006_G23 |
Library |
TST38 |
Length |
670 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_G23. 5' end sequence. |
Accession |
DK949605 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GCGAGACCACCAGAAGAGCGAATGACAGATCACGGCAATTGAATCGTTGACAGCATTGTA ATTAATGCCACCATTACATGATATTCGTCTGTGGCGTTGTCTTTGTGTTTCTCCTGGTCT TGACCGGACGCGCATTCTCTCAGGTGAGCAAGATGGAAGGGACCGATCAAACATCTAGAG ACTCGCAGGAAGGTAAAACGTCTGAGAGGACATCCCCGAGCAATGTCGAACAAACTGCAG AAGACACAAACAAGCCCTTACAGCTACCTGCTGAGGCTCTCTATTATGCGCTACCGTACA TGAATCTGCAGGAATTACTTAGCATGGAGCAAGTTTGCAGAGCTTCACGGGAGTGGGTCA GGGATGGTGTCTTATTATGGCGTAGGCTACACTTAGAAGAGCCTCTCAACTATAGTGTTA CGGATGAAGTTCTCTGTTGTCTTTCAAAAAGGTCTAATGGGCAGCTGGAATGCCTTTGCC TAGTTGATTGCGTCGGAATCACTGAAGCAGCAGTGGAAAAGGTGGTTTTAATGAGTCCAA GGCTGACAAAGTTGTTTTTGCCAGGTTGCACTGGAATAAGTGCAGATTTTGTTGTGAAGA TTGTGAAGGTGCACACAGGCTTATGGGGGGGTATAATGCCTGGTTTGAAGGAGCTGAAAT TACGGAACAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5R3Z8 |
Definition |
sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii |
Align length |
107 |
Score (bit) |
37.7 |
E-value |
0.054 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A0ELV1 |
Definition |
tr|A0ELV1|A0ELV1_PETIN Non-S-locus F-box-like protein 2411 (Fragment) OS=Petunia integrifolia subsp. inflata |
Align length |
114 |
Score (bit) |
109.0 |
E-value |
2.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949605|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0006_G23, 5' (657 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A0ELV1|A0ELV1_PETIN Non-S-locus F-box-like protein 2411 (Frag... 109 2e-22 tr|A7QBT8|A7QBT8_VITVI Chromosome chr1 scaffold_75, whole genome... 108 3e-22 tr|A9S5J7|A9S5J7_PHYPA Predicted protein OS=Physcomitrella paten... 102 2e-20 tr|A7PLU8|A7PLU8_VITVI Chromosome chr14 scaffold_21, whole genom... 97 7e-19 tr|A7P3T3|A7P3T3_VITVI Chromosome chr1 scaffold_5, whole genome ... 95 3e-18 tr|Q7EY67|Q7EY67_ORYSJ F-box protein family-like protein OS=Oryz... 88 4e-16 tr|Q9LU91|Q9LU91_ARATH Gb|AAD12709.1 (At3g26000) (AT3g26000/MPE1... 87 7e-16 tr|Q8L720|Q8L720_ARATH Expressed protein OS=Arabidopsis thaliana... 87 7e-16 tr|Q9ZU90|Q9ZU90_ARATH Expressed protein (Putative uncharacteriz... 86 3e-15 tr|Q7X920|Q7X920_ORYSJ Os04g0485800 protein OS=Oryza sativa subs... 86 3e-15 tr|A2XUU3|A2XUU3_ORYSI Putative uncharacterized protein OS=Oryza... 86 3e-15 tr|Q8LGD0|Q8LGD0_ARATH Putative uncharacterized protein OS=Arabi... 85 3e-15 tr|Q9LK24|Q9LK24_ARATH Genomic DNA, chromosome 3, TAC clone:K17E... 80 1e-13 tr|Q0J5K5|Q0J5K5_ORYSJ Os08g0428100 protein OS=Oryza sativa subs... 77 1e-12 tr|A5AQT0|A5AQT0_VITVI Putative uncharacterized protein OS=Vitis... 75 4e-12 tr|B8BB00|B8BB00_ORYSI Putative uncharacterized protein OS=Oryza... 70 9e-11 tr|B4FSX1|B4FSX1_MAIZE Putative uncharacterized protein OS=Zea m... 66 2e-09 tr|B4FP45|B4FP45_MAIZE Putative uncharacterized protein OS=Zea m... 66 2e-09 tr|Q6Z072|Q6Z072_ORYSJ Os08g0195800 protein OS=Oryza sativa subs... 44 0.011 tr|A2YS41|A2YS41_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.011 tr|A7S506|A7S506_NEMVE Predicted protein OS=Nematostella vectens... 42 0.025 tr|B4FEB5|B4FEB5_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.043 tr|Q6CPC0|Q6CPC0_KLULA KLLA0E06051p OS=Kluyveromyces lactis GN=K... 42 0.043 tr|A3BQG5|A3BQG5_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.056 tr|B3MG54|B3MG54_DROAN GF11789 OS=Drosophila ananassae GN=GF1178... 41 0.056 tr|Q6FJ52|Q6FJ52_CANGA Strain CBS138 chromosome M complete seque... 41 0.056 tr|B8BBH4|B8BBH4_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.096 tr|A7S5H2|A7S5H2_NEMVE Predicted protein (Fragment) OS=Nematoste... 40 0.16 tr|Q0U911|Q0U911_PHANO Putative uncharacterized protein OS=Phaeo... 39 0.21 tr|B8K0E7|B8K0E7_DANRE Novel protein similar to H.sapiens FBXL20... 39 0.28
>tr|A0ELV1|A0ELV1_PETIN Non-S-locus F-box-like protein 2411 (Fragment) OS=Petunia integrifolia subsp. inflata GN=FBP2411 PE=2 SV=1 Length = 265
Score = 109 bits (272), Expect = 2e-22 Identities = 49/114 (42%), Positives = 85/114 (74%) Frame = +3
Query: 267 PAEALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCLS 446 P EAL++AL Y+ +++LL++E+VCR+ R V++ LLW+ +H+E+PLN ++D+VL L+ Sbjct: 40 PHEALFFALGYLGVKDLLNVERVCRSLRFTVKNDPLLWKTIHIEKPLN-EISDDVLLQLT 98
Query: 447 KRSNGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVK 608 R+ G L+CL L++C+ IT+ + +V+ +PRLTKL +P CT +S + +V I++ Sbjct: 99 SRAQGNLQCLSLLECIRITDEGLRRVLEANPRLTKLSVPACTRLSIEGIVNILR 152
>tr|A7QBT8|A7QBT8_VITVI Chromosome chr1 scaffold_75, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035104001 PE=4 SV=1 Length = 458
Score = 108 bits (270), Expect = 3e-22 Identities = 56/132 (42%), Positives = 90/132 (68%), Gaps = 2/132 (1%) Frame = +3
Query: 267 PAEALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCLS 446 P A+ +AL Y+ L++LLS+E+VCR+ R V+ LLWR +H+++PLN +TD++L L+ Sbjct: 197 PHAAVSFALGYLGLRDLLSVERVCRSLRATVQSDPLLWRSIHVDQPLNERITDDILLQLT 256
Query: 447 KRSNGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVKV--HTG 620 +R+ G L+ L LV+C IT+ +++V+ +PRLTKL +PGCT +S + VV +++ TG Sbjct: 257 RRAQGNLQGLHLVECPRITDDGLKRVLESNPRLTKLCVPGCTRLSIEGVVNMLRAFQSTG 316
Query: 621 LWGGIMPGLKEL 656 PG+K L Sbjct: 317 -----TPGIKHL 323
>tr|A9S5J7|A9S5J7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124381 PE=4 SV=1 Length = 292
Score = 102 bits (254), Expect = 2e-20 Identities = 52/128 (40%), Positives = 84/128 (65%) Frame = +3
Query: 273 EALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCLSKR 452 EAL+Y LPY+ L+ELL++E + R R+ +R L W++L ++ P N + T+ L L+ R Sbjct: 23 EALFYVLPYLGLRELLTLETLSRRLRDLIRGDPLSWQQLLVDAPSNKNFTNVELVKLTSR 82
Query: 453 SNGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVKVHTGLWGG 632 + G+L+ L LV C+ I+E VE V++ +P + KL L GCTG+SA+ ++++VK+ T Sbjct: 83 AQGRLQSLSLVKCLKISEEVVEAVLVANPLVHKLGLAGCTGVSAEAILRMVKLQTDRRSP 142
Query: 633 IMPGLKEL 656 PGL +L Sbjct: 143 DFPGLVQL 150
>tr|A7PLU8|A7PLU8_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020573001 PE=4 SV=1 Length = 480
Score = 97.4 bits (241), Expect = 7e-19 Identities = 46/114 (40%), Positives = 78/114 (68%) Frame = +3
Query: 267 PAEALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCLS 446 P +AL+++L Y+ +Q+LL +E+VCR+ VR LLWR + +++PL+ +TD+ L L+ Sbjct: 200 PHDALFFSLAYLGVQDLLVVERVCRSLCNVVRSDPLLWRNICIDQPLSDKITDDALLQLT 259
Query: 447 KRSNGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVK 608 R+ G L+ L LV C IT++ +++V+ +PRLTKL +PGC +S D ++ +K Sbjct: 260 GRAQGSLQGLSLVQCPRITDSGLKRVLENNPRLTKLCVPGCVRLSVDCILLNLK 313
>tr|A7P3T3|A7P3T3_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030569001 PE=4 SV=1 Length = 309
Score = 95.1 bits (235), Expect = 3e-18 Identities = 45/117 (38%), Positives = 76/117 (64%) Frame = +3
Query: 267 PAEALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCLS 446 P EAL L Y+ L ELL+M +VCR+ R+ V VL W + +E+PLN +DE++ L+ Sbjct: 45 PHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLDIIVEKPLNMLFSDEIMIKLT 104
Query: 447 KRSNGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVKVHT 617 ++NG+L L L+ C IT+ +++V+ +P + +L+LP CTG++ + +++ VK T Sbjct: 105 SKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYLPACTGLTPEGIMRAVKTLT 161
>tr|Q7EY67|Q7EY67_ORYSJ F-box protein family-like protein OS=Oryza sativa subsp. japonica GN=OSJNBb0032E15.123 PE=4 SV=1 Length = 889
Score = 88.2 bits (217), Expect = 4e-16 Identities = 49/116 (42%), Positives = 73/116 (62%), Gaps = 1/116 (0%) Frame = +3
Query: 267 PAEALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEP-LNYSVTDEVLCCL 443 P AL +L Y+ L+ELLS CR R+ V LLWRR+ + P L +TDE L L Sbjct: 594 PHAALLLSLAYLPLRELLSCAGACRRLRDAVAGDPLLWRRVAVAAPPLARRLTDEALLAL 653
Query: 444 SKRSNGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVKV 611 + R+ G L L L+ C +++A + +VV +P +T+L++P CTG++A+ VVKIV+V Sbjct: 654 TGRAGGTLRSLRLLGCTRVSDAGLLRVVERNPGITELYMPRCTGLTAEGVVKIVQV 709
>tr|Q9LU91|Q9LU91_ARATH Gb|AAD12709.1 (At3g26000) (AT3g26000/MPE11_15) OS=Arabidopsis thaliana GN=At3g26000 PE=1 SV=1 Length = 453
Score = 87.4 bits (215), Expect = 7e-16 Identities = 38/111 (34%), Positives = 73/111 (65%) Frame = +3
Query: 276 ALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCLSKRS 455 A+ + L ++ ++LLS+ VC++ V D LLW+ +H+ PLN +T+E L L++R+ Sbjct: 203 AIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERA 262
Query: 456 NGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVK 608 G ++CL +VDC IT+ +++VV + ++ K+ +PGCT I+ D ++ +++ Sbjct: 263 QGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLR 313
>tr|Q8L720|Q8L720_ARATH Expressed protein OS=Arabidopsis thaliana GN=At3g26000 PE=2 SV=1 Length = 453
Score = 87.4 bits (215), Expect = 7e-16 Identities = 38/111 (34%), Positives = 73/111 (65%) Frame = +3
Query: 276 ALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCLSKRS 455 A+ + L ++ ++LLS+ VC++ V D LLW+ +H+ PLN +T+E L L++R+ Sbjct: 203 AIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERA 262
Query: 456 NGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVK 608 G ++CL +VDC IT+ +++VV + ++ K+ +PGCT I+ D ++ +++ Sbjct: 263 QGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLR 313
>tr|Q9ZU90|Q9ZU90_ARATH Expressed protein (Putative uncharacterized protein At2g01620) (Putative uncharacterized protein At2g01620/T8O11.21) OS=Arabidopsis thaliana GN=At2g01620/T8O11.21 PE=1 SV=1 Length = 292
Score = 85.5 bits (210), Expect = 3e-15 Identities = 43/113 (38%), Positives = 74/113 (65%), Gaps = 1/113 (0%) Frame = +3
Query: 273 EALYYALPYMN-LQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCLSK 449 E L LPY++ L ELLSM +V R+ R+ +RD LW +L +E PL+ +TD++L S Sbjct: 18 EVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFSS 77
Query: 450 RSNGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVK 608 +S G+L+ L L C+ +T + +VV +P +TK+ +PGC+G++ + +++ V+ Sbjct: 78 KSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVE 130
>tr|Q7X920|Q7X920_ORYSJ Os04g0485800 protein OS=Oryza sativa subsp. japonica GN=OJ000223_09.11 PE=2 SV=2 Length = 453
Score = 85.5 bits (210), Expect = 3e-15 Identities = 40/115 (34%), Positives = 72/115 (62%) Frame = +3
Query: 264 LPAEALYYALPYMNLQELLSMEQVCRASREWVRDGVLLWRRLHLEEPLNYSVTDEVLCCL 443 +P E + +AL Y+ L+++LS+E+VC+ VR+ LLW+ +H+E L ++D L L Sbjct: 199 VPHEGMLFALDYLGLRDILSVERVCKTLHSAVRNEPLLWKSIHIEGDLRQRISDAGLLHL 258
Query: 444 SKRSNGQLECLCLVDCVGITEAAVEKVVLMSPRLTKLFLPGCTGISADFVVKIVK 608 +++ L+CL + CV IT+ ++ V+ +PRLTKL + GC ++ D ++ +K Sbjct: 259 TQKCPDTLQCLSIACCVNITDQGLKAVLESNPRLTKLSILGCPRLTLDGLISNLK 313
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