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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949600
Clone id TST38A01NGRL0006_G18
Library
Length 641
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_G18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
GCCGTGAAAAATAATCAAATCGAGGCATTTGCCTTTCTGGAGTATTTAGATCCGTCTGTG
ACCCTCAAAGCTTGTGCTGGACTCAATGGCATGCGATTAGGAAACAAGATACTTACTGTG
GTTCAAGCTACCCCAGATGCAGTCTCAGAGACTGATGGGAAACAGGATCCCTTTTATGGT
GTCCCAGAGCATGCGAAAACATTATTACGGGCTCCAACACGTATTTTGGAACTCCAGAAT
GTGATTACCAAAGCAGAAGCTTTATCCATGTCAGAAGCAGAGTTTCTAGAAATTGAGGAG
GATGTCCGCACAGAGTGTAAAAGGTTTGGAACCGTGAAGTCTACTCATATCGTTAAACCA
GAAACGAGGCTAGACGAGAATCCCCAGATCAATTTAGGAGATGAAAATAGTGCAGAGCAG
CTTTTGCTTCAAGCTGAAGAGGCCTGTGTGTCAGAAGTCGACAAAAGAATTGCTGAGTAT
ATAGCTAGTGTTGGGGGTGAAAATGTTCTGTCTGGTGGCGATTCTGCAAAAGTGATTGGG
GCTATTCAAGAGAATAACTGTCAGTCTTCAAATGCCTCTGTGGAGGATACAAAAGAGGCA
CCAAGAGCAGAGCAGCTGGAAAGTGGGGCAGTTACTGAGGC
■■Homology search results ■■ -
sp_hit_id Q24562
Definition sp|Q24562|U2AF2_DROME Splicing factor U2AF 50 kDa subunit OS=Drosophila melanogaster
Align length 117
Score (bit) 68.2
E-value 4.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949600|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_G18, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q24562|U2AF2_DROME Splicing factor U2AF 50 kDa subunit OS=Dro...    68   4e-11
sp|P90727|U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit OS=Cae...    68   4e-11
sp|P26369|U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit OS=Mus...    68   5e-11
sp|P26368|U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit OS=Hom...    68   5e-11
sp|P90978|U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit OS=Cae...    67   1e-10
sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B OS=Ar...    63   1e-09
sp|Q9ZR40|U2A2B_NICPL Splicing factor U2af large subunit B OS=Ni...    61   4e-09
sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A OS=Ni...    57   8e-08
sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A OS=Ar...    52   3e-06
sp|Q2QKB4|U2A2B_WHEAT Splicing factor U2af large subunit B OS=Tr...    52   3e-06
sp|Q2R0Q1|U2A2A_ORYSJ Splicing factor U2af large subunit A OS=Or...    52   3e-06
sp|Q2QZL4|U2A2B_ORYSJ Splicing factor U2af large subunit B OS=Or...    51   4e-06
sp|Q5RCY1|UHMK1_PONAB Serine/threonine-protein kinase Kist OS=Po...    47   1e-04
sp|Q8TAS1|UHMK1_HUMAN Serine/threonine-protein kinase Kist OS=Ho...    47   1e-04
sp|Q63285|UHMK1_RAT Serine/threonine-protein kinase Kist OS=Ratt...    46   1e-04
sp|P97343|UHMK1_MOUSE Serine/threonine-protein kinase Kist OS=Mu...    46   1e-04
sp|Q2QKB3|U2A2A_WHEAT Splicing factor U2af large subunit A OS=Tr...    43   0.001
sp|P31293|CH60_CHRVI 60 kDa chaperonin OS=Chromatium vinosum GN=...    42   0.004
sp|P36629|U2AF2_SCHPO Splicing factor U2AF 59 kDa subunit OS=Sch...    40   0.010
sp|Q2Y6I6|CH60_NITMU 60 kDa chaperonin OS=Nitrosospira multiform...    39   0.023
sp|Q9XAU7|CH60_PSEHT 60 kDa chaperonin OS=Pseudoalteromonas halo...    39   0.030
sp|A8G8S7|CH60_SERP5 60 kDa chaperonin OS=Serratia proteamaculan...    38   0.039
sp|P48219|CH60_YEREN 60 kDa chaperonin OS=Yersinia enterocolitic...    37   0.067
sp|Q5QVT4|CH60_IDILO 60 kDa chaperonin OS=Idiomarina loihiensis ...    37   0.067
sp|Q2KXZ3|CH60_BORA1 60 kDa chaperonin OS=Bordetella avium (stra...    37   0.067
sp|A8H8W3|CH60_SHEPA 60 kDa chaperonin OS=Shewanella pealeana (s...    37   0.11 
sp|B0TVL3|CH60_SHEHH 60 kDa chaperonin OS=Shewanella halifaxensi...    37   0.11 
sp|Q2LPJ8|CH601_SYNAS 60 kDa chaperonin 1 OS=Syntrophus aciditro...    37   0.11 
sp|Q66FD5|CH60_YERPS 60 kDa chaperonin OS=Yersinia pseudotubercu...    36   0.15 
sp|A4TRR0|CH60_YERPP 60 kDa chaperonin OS=Yersinia pestis (strai...    36   0.15 

>sp|Q24562|U2AF2_DROME Splicing factor U2AF 50 kDa subunit
           OS=Drosophila melanogaster GN=U2af50 PE=1 SV=1
          Length = 416

 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQAT---PDAVSETDGKQDPFYGVPEH 192
           + +AF EY+D S+T ++ AGLNGM+LG+K L V +A+    +A +  +  Q     VP  
Sbjct: 248 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGL 307

Query: 193 AKTLLRA-PTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVKP 360
           +  +    PT +L L N++T  E     E E+ +I ED++ EC ++G V+S  I +P
Sbjct: 308 SNVVTSGPPTEVLCLLNMVTPDEL--RDEEEYEDILEDIKEECTKYGVVRSVEIPRP 362


>sp|P90727|U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit
           OS=Caenorhabditis briggsae GN=uaf-1 PE=3 SV=2
          Length = 488

 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAV---SETDGKQDPFYGVPEH 192
           + +AF EYLDP++T +A AGLNGM+LG+K L V  A  +     +          G+ + 
Sbjct: 322 KGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQTRHNTHLPNSASAIAGI-DL 380

Query: 193 AKTLLRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVKPETRL 372
           ++   RA T IL L N++T+ E    S+ ++ EI EDVR EC ++G V+S  I +P    
Sbjct: 381 SQGAGRA-TEILCLMNMVTEDEL--RSDEDYEEILEDVREECSKYGIVRSLEIPRP---Y 434

Query: 373 DENPQINLG 399
           D++P   +G
Sbjct: 435 DDHPVPGVG 443


>sp|P26369|U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit OS=Mus
           musculus GN=U2af2 PE=1 SV=3
          Length = 475

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQAT-----------PDAVSETD-GKQ 165
           + +AF EY+D +VT +A AGLNGM+LG+K L V +A+           P  +++T    Q
Sbjct: 300 KGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQ 359

Query: 166 DPFYGVPEHAKTLLRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKST 345
            P  G+      +   PT +L L N++   E L   + E+ EI EDVR EC ++G VKS 
Sbjct: 360 VP--GLMSSQVQMGGHPTEVLCLMNMVLPEELL--DDEEYEEIVEDVRDECSKYGLVKSI 415

Query: 346 HIVKP 360
            I +P
Sbjct: 416 EIPRP 420


>sp|P26368|U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit OS=Homo
           sapiens GN=U2AF2 PE=1 SV=4
          Length = 475

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQAT-----------PDAVSETD-GKQ 165
           + +AF EY+D +VT +A AGLNGM+LG+K L V +A+           P  +++T    Q
Sbjct: 300 KGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSPPSTINQTPVTLQ 359

Query: 166 DPFYGVPEHAKTLLRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKST 345
            P  G+      +   PT +L L N++   E L   + E+ EI EDVR EC ++G VKS 
Sbjct: 360 VP--GLMSSQVQMGGHPTEVLCLMNMVLPEELL--DDEEYEEIVEDVRDECSKYGLVKSI 415

Query: 346 HIVKP 360
            I +P
Sbjct: 416 EIPRP 420


>sp|P90978|U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit
           OS=Caenorhabditis elegans GN=uaf-1 PE=1 SV=2
          Length = 496

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKT 201
           + +AF EYLDP++T +A AGLNGM+LG+K L V  A  +       +Q     +P  A  
Sbjct: 331 KGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACAN-------QQRHNTNLPNSASA 383

Query: 202 L--------LRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVK 357
           +            T IL L N++T+ E    ++ E+ EI EDVR EC ++G V+S  I +
Sbjct: 384 IAGIDLSQGAGRATEILCLMNMVTEDEL--KADDEYEEILEDVRDECSKYGIVRSLEIPR 441

Query: 358 P 360
           P
Sbjct: 442 P 442


>sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B
           OS=Arabidopsis thaliana GN=U2AF65B PE=2 SV=2
          Length = 589

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDP-FYGVPEHAK 198
           + +AF  Y DPSVT  ACA LNG+++G+K LTV +A   A+     +++   Y   + A 
Sbjct: 416 KGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIAL 475

Query: 199 TLLR-----APTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVKPE 363
             L       PT+I+ L  V+T  +     + E+ EI ED+R E  +FG + +  I +P 
Sbjct: 476 QRLMFQPGGTPTKIVCLTQVVTADDL--RDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPN 533

Query: 364 TRLDENPQI 390
              D  P +
Sbjct: 534 PDHDPTPGV 542


>sp|Q9ZR40|U2A2B_NICPL Splicing factor U2af large subunit B
           OS=Nicotiana plumbaginifolia GN=U2AF65B PE=2 SV=1
          Length = 573

 Score = 61.2 bits (147), Expect = 4e-09
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKT 201
           + +AF  Y D SVT  ACA LNG+++G+K LTV +A         G   P    PE    
Sbjct: 400 KGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRA-------NQGTTQP---KPEQESV 449

Query: 202 LLRAPTRI----LELQNVITKAEALSMSEA----------EFLEIEEDVRTECKRFGTVK 339
           LL A  +I    L LQ      + LS++E           ++ +I ED+RTEC +FG++ 
Sbjct: 450 LLHAQQQIALQRLMLQPATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLV 509

Query: 340 STHIVKPETRLDENPQI 390
           +  I +P    +  P +
Sbjct: 510 NVVIPRPSPNGEPTPGV 526


>sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A
           OS=Nicotiana plumbaginifolia GN=U2AF65A PE=2 SV=1
          Length = 555

 Score = 57.0 bits (136), Expect = 8e-08
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKT 201
           + +AF  Y D SVT  ACA LNG+++G+K LTV +A     ++ + +Q+      +    
Sbjct: 382 KGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRAN-QGTTQPNPEQESVLLHAQQQIA 440

Query: 202 LLR-------APTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVKP 360
           L R         T++L L  V+T  E     + ++ +I ED+RTEC++FG + +  I +P
Sbjct: 441 LQRFMLQPGALATKVLCLTEVVTVDEL--NDDDDYQDILEDMRTECEKFGALVNVVIPRP 498


>sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A
           OS=Arabidopsis thaliana GN=U2AF65A PE=2 SV=2
          Length = 573

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEH--- 192
           + +AF  Y D SVT  ACA LNG+++G+K LTV +A    + +   +++      +    
Sbjct: 400 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAF 459

Query: 193 AKTLLR---APTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVKPE 363
            + +L+     T ++ L  V+T+ E     + E+ +I ED+R E  +FG +  T++V P 
Sbjct: 460 QRVMLQPGAVATTVVCLTQVVTEDEL--RDDEEYGDIMEDMRQEGGKFGAL--TNVVIPR 515

Query: 364 TRLDENPQINLG 399
              +  P   LG
Sbjct: 516 PSPNGEPVAGLG 527


>sp|Q2QKB4|U2A2B_WHEAT Splicing factor U2af large subunit B
           OS=Triticum aestivum GN=U2AF65B PE=2 SV=1
          Length = 543

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKT 201
           + +AF  Y D +VT  ACA LNG+++G+K LTV +A         G   P    PE    
Sbjct: 368 KGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRA-------NQGSAQP---RPEQENI 417

Query: 202 LLRA----------------PTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGT 333
           LL+A                PT+++ L  V+T  E     + E+ +I ED+R E  ++G 
Sbjct: 418 LLQAQQQVQLQKLVYQVGALPTKVVCLTQVVTADEL--KDDEEYEDIMEDMRLEAGKYGN 475

Query: 334 VKSTHIVKP 360
           +    I +P
Sbjct: 476 LVKVVIPRP 484
tr_hit_id A7NXF8
Definition tr|A7NXF8|A7NXF8_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera
Align length 112
Score (bit) 139.0
E-value 1.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949600|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_G18, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NXF8|A7NXF8_VITVI Chromosome chr5 scaffold_2, whole genome ...   139   1e-31
tr|A5AX08|A5AX08_VITVI Putative uncharacterized protein OS=Vitis...   132   2e-29
tr|Q10S20|Q10S20_ORYSJ RNA recognition motif family protein, exp...   125   3e-27
tr|Q0DVB7|Q0DVB7_ORYSJ Os03g0138100 protein OS=Oryza sativa subs...   125   3e-27
tr|B8AMU8|B8AMU8_ORYSI Putative uncharacterized protein OS=Oryza...   123   8e-27
tr|Q10S21|Q10S21_ORYSJ RNA recognition motif family protein, exp...   120   5e-26
tr|A9PK55|A9PK55_POPJC Putative uncharacterized protein OS=Popul...   117   5e-25
tr|O22794|O22794_ARATH Putative splicing factor U2AF large chain...   115   3e-24
tr|A9SW23|A9SW23_PHYPA Predicted protein OS=Physcomitrella paten...   107   5e-22
tr|A3ADX1|A3ADX1_ORYSJ Putative uncharacterized protein OS=Oryza...   107   5e-22
tr|Q5JJU2|Q5JJU2_ORYSJ cDNA clone:J033112L14, full insert sequen...   103   1e-20
tr|B8A9I0|B8A9I0_ORYSI Putative uncharacterized protein OS=Oryza...   103   1e-20
tr|A3A1N6|A3A1N6_ORYSJ Putative uncharacterized protein OS=Oryza...   103   1e-20
tr|Q10S19|Q10S19_ORYSJ RNA recognition motif family protein, exp...    91   5e-17
tr|Q10S18|Q10S18_ORYSJ RNA recognition motif family protein, exp...    91   8e-17
tr|B3NPA0|B3NPA0_DROER GG20057 OS=Drosophila erecta GN=GG20057 P...    74   8e-12
tr|Q6B510|Q6B510_9ANNE U2 small nuclear ribonucleoprotein auxili...    74   1e-11
tr|B4LPK2|B4LPK2_DROVI GJ20975 OS=Drosophila virilis GN=GJ20975 ...    73   2e-11
tr|B4P946|B4P946_DROYA GE11595 OS=Drosophila yakuba GN=GE11595 P...    72   2e-11
tr|B4I8I1|B4I8I1_DROSE GM15574 OS=Drosophila sechellia GN=GM1557...    71   5e-11
tr|B4QI74|B4QI74_DROSI GD25073 OS=Drosophila simulans GN=GD25073...    71   6e-11
tr|B6PFB2|B6PFB2_BRAFL Putative uncharacterized protein (Fragmen...    70   1e-10
tr|B6LDB6|B6LDB6_BRAFL Putative uncharacterized protein OS=Branc...    70   1e-10
tr|Q922I0|Q922I0_MOUSE U2 small nuclear ribonucleoprotein auxili...    70   1e-10
tr|Q80XR5|Q80XR5_MOUSE U2af2 protein OS=Mus musculus GN=U2af2 PE...    70   1e-10
tr|Q505Q1|Q505Q1_MOUSE U2af2 protein (Fragment) OS=Mus musculus ...    70   1e-10
tr|Q3KQM4|Q3KQM4_MOUSE U2af2 protein OS=Mus musculus GN=U2af2 PE...    70   1e-10
tr|B5BU25|B5BU25_HUMAN U2 small nuclear RNA auxiliary factor 2 i...    70   1e-10
tr|Q6NVN9|Q6NVN9_XENTR U2 small nuclear ribonucleoprotein auxili...    69   2e-10
tr|Q28EQ0|Q28EQ0_XENTR U2 (RNU2) small nuclear RNA auxiliary fac...    69   2e-10

>tr|A7NXF8|A7NXF8_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020315001
           PE=4 SV=1
          Length = 902

 Score =  139 bits (351), Expect = 1e-31
 Identities = 69/112 (61%), Positives = 87/112 (77%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKT 201
           E  AFLEY+D SVTLKACAGLNGM+LG ++LTVVQA P+A++  +    PFYG+PEHAK 
Sbjct: 577 EPCAFLEYVDQSVTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAKP 636

Query: 202 LLRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVK 357
           LL  PT++L+L+NV+   +  S+SEAE  EI ED+R EC RFGTVKS +IVK
Sbjct: 637 LLERPTQVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNIVK 688


>tr|A5AX08|A5AX08_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_036574 PE=4 SV=1
          Length = 630

 Score =  132 bits (332), Expect = 2e-29
 Identities = 64/106 (60%), Positives = 83/106 (78%)
 Frame = +1

Query: 40  EYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKTLLRAPT 219
           +Y+D SVTLKACAGLNGM+LG ++LTVVQA P+A++  +    PFYG+PEHAK LL  PT
Sbjct: 298 QYVDQSVTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAKPLLERPT 357

Query: 220 RILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVK 357
           ++L+L+NV+   +  S+SEAE  EI ED+R EC RFGTVKS +IVK
Sbjct: 358 QVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNIVK 403


>tr|Q10S20|Q10S20_ORYSJ RNA recognition motif family protein,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g04520 PE=4 SV=1
          Length = 964

 Score =  125 bits (313), Expect = 3e-27
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +1

Query: 25  AFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKTL 204
           A AFLEY+D S+T KACAGLNGM+LG  ILT V   P++  +   +  PFYG+P+ AK+L
Sbjct: 626 ACAFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSL 685

Query: 205 LRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVK 357
           L  PT++L+L+NV  + E L +S++E  EI EDVR EC RFG VKS ++VK
Sbjct: 686 LEEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVK 736


>tr|Q0DVB7|Q0DVB7_ORYSJ Os03g0138100 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0138100 PE=4 SV=1
          Length = 404

 Score =  125 bits (313), Expect = 3e-27
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +1

Query: 25  AFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKTL 204
           A AFLEY+D S+T KACAGLNGM+LG  ILT V   P++  +   +  PFYG+P+ AK+L
Sbjct: 66  ACAFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSL 125

Query: 205 LRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVK 357
           L  PT++L+L+NV  + E L +S++E  EI EDVR EC RFG VKS ++VK
Sbjct: 126 LEEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVK 176


>tr|B8AMU8|B8AMU8_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_09930 PE=4 SV=1
          Length = 1128

 Score =  123 bits (309), Expect = 8e-27
 Identities = 59/111 (53%), Positives = 80/111 (72%)
 Frame = +1

Query: 25   AFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKTL 204
            A AFLEY+D S+T KACAGLNGM+LG  ILT V   P++  +   +  PFYG+P+ AK+L
Sbjct: 790  ACAFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSL 849

Query: 205  LRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVK 357
            L  PT++L+L+NV  + E L +S++E  EI EDVR EC RFG VKS ++V+
Sbjct: 850  LEEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVE 900


>tr|Q10S21|Q10S21_ORYSJ RNA recognition motif family protein,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g04520 PE=4 SV=1
          Length = 964

 Score =  120 bits (302), Expect = 5e-26
 Identities = 59/111 (53%), Positives = 79/111 (71%)
 Frame = +1

Query: 25  AFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKTL 204
           A AFLEY+D S+T KACAGLNGM+LG  ILT V   P++  +   +  PFYG+P+ AK+L
Sbjct: 626 ACAFLEYIDHSITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSL 685

Query: 205 LRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVK 357
           L  PT++L+L+NV  + E L +S++E  EI EDVR E  RFG VKS ++VK
Sbjct: 686 LEEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVEYDRFGAVKSINVVK 736


>tr|A9PK55|A9PK55_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 787

 Score =  117 bits (294), Expect = 5e-25
 Identities = 57/112 (50%), Positives = 74/112 (66%)
 Frame = +1

Query: 22  EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKT 201
           E FAFLEY D SVT KACAGLNGM+LG +++T +QA P+A S        F  + +HAK 
Sbjct: 445 EPFAFLEYADESVTFKACAGLNGMKLGGQVITAIQAVPNASSSGSDGNSQFGQISQHAKA 504

Query: 202 LLRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRFGTVKSTHIVK 357
           LL  PT +L+L+NV       S+S  E  E+ EDVR EC RFG+VKS +++K
Sbjct: 505 LLEKPTEVLKLKNVFDSESLSSLSNTEVEEVLEDVRLECARFGSVKSINVIK 556


>tr|O22794|O22794_ARATH Putative splicing factor U2AF large chain
           OS=Arabidopsis thaliana GN=At2g33440 PE=2 SV=1
          Length = 475

 Score =  115 bits (287), Expect = 3e-24
 Identities = 61/109 (55%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
 Frame = +1

Query: 4   VKNNQI-EAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYG 180
           V NN + +  AFLEY D SVTLKACAGLNGMRLG  ++T V A PDA S    +  PFYG
Sbjct: 300 VSNNDLNQRCAFLEYTDGSVTLKACAGLNGMRLGGSVITAVCAFPDASSVAVNENPPFYG 359

Query: 181 VPEHAKTLLRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTECKRF 327
           +P HAK LL  P  IL+L+NV+   +  S SE E  EI EDVR EC R+
Sbjct: 360 IPSHAKPLLGKPKNILKLKNVVDPEDLTSFSEQEVKEILEDVRLECARW 408


>tr|A9SW23|A9SW23_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_136079 PE=4 SV=1
          Length = 207

 Score =  107 bits (268), Expect = 5e-22
 Identities = 52/102 (50%), Positives = 69/102 (67%)
 Frame = +1

Query: 10  NNQIEAFAFLEYLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPE 189
           NN   + AF EYLDP+VT +AC GLNGM LG ++LTV+QATPDA  E   K  PFY +PE
Sbjct: 35  NNGGCSIAFFEYLDPTVTHQACKGLNGMNLGGQVLTVLQATPDAKYEVFSKNPPFYDIPE 94

Query: 190 HAKTLLRAPTRILELQNVITKAEALSMSEAEFLEIEEDVRTE 315
            A  LL  PT +LE+ N++++ E L M + +  ++ EDVR E
Sbjct: 95  EALPLLETPTNVLEIHNLVSEEEVLHMQDKDVRKLMEDVRIE 136


>tr|A3ADX1|A3ADX1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008993 PE=4 SV=1
          Length = 942

 Score =  107 bits (268), Expect = 5e-22
 Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
 Frame = +1

Query: 43  YLDPSVTLKACAGLNGMRLGNKILTVVQATPDAVSETDGKQDPFYGVPEHAKTLLRAPTR 222
           Y+D  +T KACAGLNGM+LG  ILT V   P++  +   +  PFYG+P+ AK+LL  PT+
Sbjct: 602 YIDHPITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLEEPTK 661

Query: 223 ILELQNVITKAEALSMSEAEFLEIEEDVRTEC--------KRFGTVKSTHIVK 357
           +L+L+NV  + E L +S++E  EI EDVR EC         RFG VKS ++VK
Sbjct: 662 VLQLKNVFDQEEYLLLSKSELEEILEDVRVECASLHYGQDDRFGAVKSINVVK 714