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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949478
Clone id TST38A01NGRL0006_B14
Library
Length 386
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0006_B14. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
GTGCTGGGGGTGACTGCTCTGGGCAAAGACATTGTGCAGGCCCAAGAAAGGGCTTACCAG
GCTGTGGACAGGGTGGACTGGCCTGATGGGTTTTACCGACATGATATCGGCTGGAGGGCA
ATTGCTCACTTGAAGGAATGTCACAAAGAAAATGTTGAATGTAACTAGCTCTCTTGATGT
AGGCTCTCATACATTTTATGGCCTGTGAAACAAGCCCAGCAAAGAGGGGATCCCTTCTGA
TAGGAGTCCCGTTAATCTCTGGTCTATGCTGTAATTCCTCGCTTGTGCTAAAGGCACTAT
TTTCAAGCAAATAATGGGCTAAACAAGCAGGGCCATTAATGAAAGATTAAGAACTCAACC
TGGCAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P52420
Definition sp|P52420|PUR2_ARATH Phosphoribosylamine--glycine ligase, chloroplastic OS=Arabidopsis thaliana
Align length 50
Score (bit) 70.1
E-value 3.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949478|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_B14, 5'
         (364 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P52420|PUR2_ARATH Phosphoribosylamine--glycine ligase, chloro...    70   3e-12
sp|Q986A5|PUR2_RHILO Phosphoribosylamine--glycine ligase OS=Rhiz...    64   3e-10
sp|Q8G2B1|PUR2_BRUSU Phosphoribosylamine--glycine ligase OS=Bruc...    60   3e-09
sp|Q8YFK1|PUR2_BRUME Phosphoribosylamine--glycine ligase OS=Bruc...    60   3e-09
sp|Q8UHN3|PUR2_AGRT5 Phosphoribosylamine--glycine ligase OS=Agro...    58   1e-08
sp|Q92RL0|PUR2_RHIME Phosphoribosylamine--glycine ligase OS=Rhiz...    57   4e-08
sp|Q9KV81|PUR2_VIBCH Phosphoribosylamine--glycine ligase OS=Vibr...    50   4e-06
sp|Q87KS8|PUR2_VIBPA Phosphoribosylamine--glycine ligase OS=Vibr...    49   6e-06
sp|P15640|PUR2_ECOLI Phosphoribosylamine--glycine ligase OS=Esch...    49   6e-06
sp|Q8FB69|PUR2_ECOL6 Phosphoribosylamine--glycine ligase OS=Esch...    49   6e-06
sp|Q8X612|PUR2_ECO57 Phosphoribosylamine--glycine ligase OS=Esch...    49   6e-06
sp|Q88DK2|PUR2_PSEPK Phosphoribosylamine--glycine ligase OS=Pseu...    49   1e-05
sp|Q8ZAR2|PUR2_YERPE Phosphoribosylamine--glycine ligase OS=Yers...    48   1e-05
sp|Q9PC09|PUR2_XYLFA Phosphoribosylamine--glycine ligase OS=Xyle...    48   2e-05
sp|Q87D59|PUR2_XYLFT Phosphoribosylamine--glycine ligase OS=Xyle...    47   2e-05
sp|Q7MGT4|PUR2_VIBVY Phosphoribosylamine--glycine ligase OS=Vibr...    47   2e-05
sp|Q8DD07|PUR2_VIBVU Phosphoribosylamine--glycine ligase OS=Vibr...    47   2e-05
sp|Q8PD48|PUR2_XANCP Phosphoribosylamine--glycine ligase OS=Xant...    47   3e-05
sp|P43845|PUR2_HAEIN Phosphoribosylamine--glycine ligase OS=Haem...    47   3e-05
sp|P26977|PUR2_SALTY Phosphoribosylamine--glycine ligase OS=Salm...    47   4e-05
sp|Q8Z334|PUR2_SALTI Phosphoribosylamine--glycine ligase OS=Salm...    47   4e-05
sp|Q87VR8|PUR2_PSESM Phosphoribosylamine--glycine ligase OS=Pseu...    47   4e-05
sp|Q9HUV8|PUR2_PSEAE Phosphoribosylamine--glycine ligase OS=Pseu...    46   5e-05
sp|Q9ABD2|PUR2_CAUCR Phosphoribosylamine--glycine ligase OS=Caul...    46   5e-05
sp|P74232|PUR2_SYNY3 Phosphoribosylamine--glycine ligase OS=Syne...    46   7e-05
sp|Q8PQ21|PUR2_XANAC Phosphoribosylamine--glycine ligase OS=Xant...    45   1e-04
sp|P57829|PUR2_PASMU Phosphoribosylamine--glycine ligase OS=Past...    45   1e-04
sp|Q9FDL5|PUR2_ZYMMO Phosphoribosylamine--glycine ligase OS=Zymo...    45   1e-04
sp|P52421|PUR2_VIGUN Phosphoribosylamine--glycine ligase (Fragme...    43   4e-04
sp|Q8D245|PUR2_WIGBR Phosphoribosylamine--glycine ligase OS=Wigg...    41   0.002

>sp|P52420|PUR2_ARATH Phosphoribosylamine--glycine ligase,
           chloroplastic OS=Arabidopsis thaliana GN=PUR2 PE=2 SV=2
          Length = 532

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 30/50 (60%), Positives = 39/50 (78%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAHLKECHKE 150
           VLGVTA GKD+ +A+ERAY AV +++WP GF+RHDIGWRA+   +   KE
Sbjct: 482 VLGVTAKGKDLEEARERAYSAVQQINWPGGFFRHDIGWRALRQKQVATKE 531


>sp|Q986A5|PUR2_RHILO Phosphoribosylamine--glycine ligase
           OS=Rhizobium loti GN=purD PE=3 SV=1
          Length = 425

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIA 126
           VL VTA G  + +AQ+RAY A+DR+DWPDGF R DIGW+A+A
Sbjct: 379 VLNVTASGATVGEAQKRAYAALDRIDWPDGFCRRDIGWQAVA 420


>sp|Q8G2B1|PUR2_BRUSU Phosphoribosylamine--glycine ligase
           OS=Brucella suis GN=purD PE=3 SV=1
          Length = 427

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAHLK 135
           VL +TA    + QAQ RAY+A+  +DWP+GFYR DIGWRA+   K
Sbjct: 380 VLNITATAATVAQAQARAYEALKLIDWPEGFYRSDIGWRAVEREK 424


>sp|Q8YFK1|PUR2_BRUME Phosphoribosylamine--glycine ligase
           OS=Brucella melitensis GN=purD PE=3 SV=1
          Length = 427

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAHLK 135
           VL +TA    + QAQ RAY+A+  +DWP+GFYR DIGWRA+   K
Sbjct: 380 VLNITATAATVAQAQARAYEALKLIDWPEGFYRSDIGWRAVEREK 424


>sp|Q8UHN3|PUR2_AGRT5 Phosphoribosylamine--glycine ligase
           OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
           GN=purD PE=3 SV=2
          Length = 423

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAHLK 135
           VL VTA G+++ +AQ RAY   D+V+W +GF R DIGW+AIA  K
Sbjct: 378 VLNVTAFGRNVTEAQARAYALADKVEWENGFCRRDIGWQAIAREK 422


>sp|Q92RL0|PUR2_RHIME Phosphoribosylamine--glycine ligase
           OS=Rhizobium meliloti GN=purD PE=3 SV=1
          Length = 423

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIA 126
           VL VTA GK + +A++ AY AV  V W +GFYR+DIGWRA+A
Sbjct: 378 VLNVTATGKTVGEAKDAAYAAVRDVSWENGFYRNDIGWRAVA 419


>sp|Q9KV81|PUR2_VIBCH Phosphoribosylamine--glycine ligase OS=Vibrio
           cholerae GN=purD PE=3 SV=1
          Length = 429

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIA 126
           VL  TALG  +++AQ+RAYQ  D++ W   F R DIG+RAIA
Sbjct: 383 VLCATALGNTVLEAQQRAYQLADQIHWNGMFCRRDIGYRAIA 424


>sp|Q87KS8|PUR2_VIBPA Phosphoribosylamine--glycine ligase OS=Vibrio
           parahaemolyticus GN=purD PE=3 SV=1
          Length = 429

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 22/46 (47%), Positives = 32/46 (69%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAHLKE 138
           VL  TALG  + +AQ+RAY+   ++ W   F+R+DIG+RAIA  +E
Sbjct: 383 VLCATALGNSVSEAQQRAYELAKQISWDGMFHRNDIGYRAIAREQE 428


>sp|P15640|PUR2_ECOLI Phosphoribosylamine--glycine ligase
           OS=Escherichia coli (strain K12) GN=purD PE=1 SV=2
          Length = 429

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 23/41 (56%), Positives = 28/41 (68%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAI 123
           VL VTALG  + +AQ+RAY  +  + W D F R DIGWRAI
Sbjct: 384 VLCVTALGHTVAEAQKRAYALMTDIHWDDCFCRKDIGWRAI 424


>sp|Q8FB69|PUR2_ECOL6 Phosphoribosylamine--glycine ligase
           OS=Escherichia coli O6 GN=purD PE=3 SV=1
          Length = 429

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 23/41 (56%), Positives = 28/41 (68%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAI 123
           VL VTALG  + +AQ+RAY  +  + W D F R DIGWRAI
Sbjct: 384 VLCVTALGHTVAEAQKRAYALMTDIHWDDCFCRKDIGWRAI 424
tr_hit_id A9RJ36
Definition tr|A9RJ36|A9RJ36_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 48
Score (bit) 73.2
E-value 6.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949478|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_B14, 5'
         (364 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RJ36|A9RJ36_PHYPA Predicted protein OS=Physcomitrella paten...    73   6e-12
tr|A9T6Y5|A9T6Y5_PHYPA Predicted protein OS=Physcomitrella paten...    73   8e-12
tr|Q6YZX5|Q6YZX5_ORYSJ Os08g0191200 protein OS=Oryza sativa subs...    70   4e-11
tr|A2YS04|A2YS04_ORYSI Putative uncharacterized protein OS=Oryza...    70   4e-11
tr|B2II73|B2II73_BEII9 Phosphoribosylamine--glycine ligase OS=Be...    70   5e-11
tr|B7ZYD3|B7ZYD3_MAIZE Putative uncharacterized protein OS=Zea m...    70   7e-11
tr|B6SW54|B6SW54_MAIZE Phosphoribosylamine--glycine ligase OS=Ze...    70   7e-11
tr|Q2QWF3|Q2QWF3_ORYSJ Os12g0197100 protein OS=Oryza sativa subs...    68   2e-10
tr|A3CFR6|A3CFR6_ORYSJ Putative uncharacterized protein OS=Oryza...    68   2e-10
tr|A2ZIW4|A2ZIW4_ORYSI Putative uncharacterized protein OS=Oryza...    68   2e-10
tr|A8U3C3|A8U3C3_9PROT Phosphoribosylamine--glycine ligase OS=al...    68   3e-10
tr|Q6G4D9|Q6G4D9_BARHE Phosphoribosylamine-glycine ligase OS=Bar...    67   4e-10
tr|Q6G0E2|Q6G0E2_BARQU Phosphoribosylamine-glycine ligase OS=Bar...    67   4e-10
tr|Q6TBQ2|Q6TBQ2_TOBAC Glycinamide ribonucleotide synthetase OS=...    67   4e-10
tr|A9IQM0|A9IQM0_BART1 Phosphoribosylamine-glycine ligase OS=Bar...    67   6e-10
tr|A1URV8|A1URV8_BARBK Phosphoribosylamine--glycine ligase OS=Ba...    66   1e-09
tr|A7QIF8|A7QIF8_VITVI Chromosome chr12 scaffold_103, whole geno...    66   1e-09
tr|Q11KF6|Q11KF6_MESSB Phosphoribosylamine--glycine ligase OS=Me...    65   1e-09
tr|A4S5J3|A4S5J3_OSTLU Predicted protein OS=Ostreococcus lucimar...    65   1e-09
tr|A8JYH8|A8JYH8_AZOBR PurD (Fragment) OS=Azospirillum brasilens...    64   5e-09
tr|B8IDK0|B8IDK0_METNO Phosphoribosylamine/glycine ligase OS=Met...    63   6e-09
tr|Q07HQ2|Q07HQ2_RHOP5 Phosphoribosylamine--glycine ligase OS=Rh...    63   8e-09
tr|B0ULS4|B0ULS4_METS4 Phosphoribosylamine--glycine ligase OS=Me...    63   8e-09
tr|Q2RWP5|Q2RWP5_RHORT Phosphoribosylamine--glycine ligase OS=Rh...    62   1e-08
tr|Q89DE1|Q89DE1_BRAJA Phosphoribosylamine--glycine ligase OS=Br...    62   1e-08
tr|Q83EJ4|Q83EJ4_COXBU Phosphoribosylamine--glycine ligase OS=Co...    62   1e-08
tr|Q1QIN9|Q1QIN9_NITHX Phosphoribosylamine--glycine ligase OS=Ni...    62   1e-08
tr|B6JIV6|B6JIV6_OLICO Phosphoribosylamine--glycine ligase OS=Ol...    62   1e-08
tr|B6J5W2|B6J5W2_COXB1 Phosphoribosylamine--glycine ligase OS=Co...    62   1e-08
tr|B6J1X9|B6J1X9_COXB2 Phosphoribosylamine--glycine ligase OS=Co...    62   1e-08

>tr|A9RJ36|A9RJ36_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175374 PE=4 SV=1
          Length = 459

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 29/48 (60%), Positives = 41/48 (85%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAHLKECH 144
           VLGV A+GKDI +AQ +AY+AV ++DWP+GF+R+DIGWRA++ L+  H
Sbjct: 410 VLGVAAVGKDIAEAQSKAYKAVHQIDWPEGFFRNDIGWRAVSRLQGAH 457


>tr|A9T6Y5|A9T6Y5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_141208 PE=4 SV=1
          Length = 459

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAHLK 135
           VLGVTA+GKDI +AQ +AY AVD++DWP+GF R DIGWRA++ L+
Sbjct: 410 VLGVTAVGKDIAEAQSKAYSAVDQIDWPEGFCRRDIGWRAVSRLQ 454


>tr|Q6YZX5|Q6YZX5_ORYSJ Os08g0191200 protein OS=Oryza sativa subsp.
           japonica GN=P0610E02.33 PE=2 SV=1
          Length = 527

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAH 129
           VLG+TA GKDI +A+ RAY AVD VDWP+GF+R DIGWRA+ H
Sbjct: 479 VLGITAKGKDIEEARARAYDAVDVVDWPEGFFRRDIGWRALKH 521


>tr|A2YS04|A2YS04_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28100 PE=4 SV=1
          Length = 527

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAIAH 129
           VLG+TA GKDI +A+ RAY AVD VDWP+GF+R DIGWRA+ H
Sbjct: 479 VLGITAKGKDIEEARARAYDAVDVVDWPEGFFRRDIGWRALKH 521


>tr|B2II73|B2II73_BEII9 Phosphoribosylamine--glycine ligase
           OS=Beijerinckia indica subsp. indica (strain ATCC 9039 /
           DSM 1715 / NCIB 8712) GN=Bind_1013 PE=4 SV=1
          Length = 421

 Score = 70.1 bits (170), Expect = 5e-11
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAI 123
           VL VT LGKD+ +A+ERAY AVD +DWP+GF RHDIGWRA+
Sbjct: 378 VLNVTGLGKDVAEARERAYAAVDLIDWPEGFCRHDIGWRAL 418


>tr|B7ZYD3|B7ZYD3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 520

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAI 123
           VLGVTA GKDI +A+ RAY AVD V+WP+GF+RHDIGWRA+
Sbjct: 473 VLGVTAKGKDIEEARARAYGAVDAVEWPEGFFRHDIGWRAL 513


>tr|B6SW54|B6SW54_MAIZE Phosphoribosylamine--glycine ligase OS=Zea
           mays PE=2 SV=1
          Length = 520

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRAI 123
           VLGVTA GKDI +A+ RAY AVD V+WP+GF+RHDIGWRA+
Sbjct: 473 VLGVTAKGKDIEEARARAYGAVDAVEWPEGFFRHDIGWRAL 513


>tr|Q2QWF3|Q2QWF3_ORYSJ Os12g0197100 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0197100 PE=2 SV=1
          Length = 518

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRA 120
           VLGVTA GKDI +A+ +AY A+D VDWP+GF+RHDIGWRA
Sbjct: 470 VLGVTAKGKDIEEARAKAYDALDVVDWPEGFFRHDIGWRA 509


>tr|A3CFR6|A3CFR6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_034138 PE=4 SV=1
          Length = 477

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRA 120
           VLGVTA GKDI +A+ +AY A+D VDWP+GF+RHDIGWRA
Sbjct: 429 VLGVTAKGKDIEEARAKAYDALDVVDWPEGFFRHDIGWRA 468


>tr|A2ZIW4|A2ZIW4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37769 PE=4 SV=1
          Length = 557

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   VLGVTALGKDIVQAQERAYQAVDRVDWPDGFYRHDIGWRA 120
           VLGVTA GKDI +A+ +AY A+D VDWP+GF+RHDIGWRA
Sbjct: 509 VLGVTAKGKDIEEARAKAYDALDVVDWPEGFFRHDIGWRA 548