NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK949391
Clone id TST38A01NGRL0005_N21
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_N21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
AAAGAGGGAAGGTTGGGGGCTTTGGATGTGCGAACGGAAAGGTGCGAATAACTCAGCAGA
TTAATCATGAATGGGAGGTCAGCCGGGCTCGATACATGCCCCACAATCCCTTCATTATTG
CCACAAACACAATTAGTGCATAAGTGTATGTTTTTGATTATAGTAAGCACCCCTCCCAAC
CTCCTCACGAGAGGCGCTGCCTTCCAGATTTAAGACTTCCTGGTCGCACAACAAAAGGAT
AGGGTTTAACTTGCAGCTCCTTGAAAGAGGGATACTTACTCACTGGGTCTGATGAAGCTC
GCATTTGTCTATCGAATCTAACTGCCAACCCACACGGTCAGAATAAGGACGAGGCAAACC
AAATTTATTAGTACCATACTGAATTTATGGAGGATGTAGCGTGCCAGTTGAAGCATGAGC
ATCTGTCTGGATCAATCAGACATAAATGCATGTTGCTTATTTGGGACACCCGCCCAAGTG
GTGATAAACCCCTGCACTCTGTCGAGGCTCATCCAGCATACGTAAACTGCTTGCCAGTCA
ATCCATTCAATGAGTGAGTGCTTGC
■■Homology search results ■■ -
sp_hit_id O22467
Definition sp|O22467|MSI1_ARATH WD-40 repeat-containing protein MSI1 OS=Arabidopsis thaliana
Align length 188
Score (bit) 212.0
E-value 9.0e-55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949391|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_N21, 5'
         (565 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O22467|MSI1_ARATH WD-40 repeat-containing protein MSI1 OS=Ara...   212   9e-55
sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1 OS=Sol...   212   1e-54
sp|Q9I8G9|RBBP7_CHICK Histone-binding protein RBBP7 OS=Gallus ga...   177   2e-44
sp|Q8AVH1|RBBP7_XENLA Histone-binding protein RBBP7 OS=Xenopus l...   176   7e-44
sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus t...   176   9e-44
sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abe...   175   1e-43
sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus muscu...   175   1e-43
sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapi...   175   1e-43
sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus ga...   175   1e-43
sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos tauru...   175   1e-43
sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Dr...   174   3e-43
sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus t...   174   4e-43
sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus...   173   5e-43
sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norv...   171   3e-42
sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus muscu...   171   3e-42
sp|Q4R304|RBBP7_MACFA Histone-binding protein RBBP7 OS=Macaca fa...   171   3e-42
sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapi...   171   3e-42
sp|Q3SWX8|RBBP7_BOVIN Histone-binding protein RBBP7 OS=Bos tauru...   171   3e-42
sp|Q5R654|RBBP7_PONAB Histone-binding protein RBBP7 OS=Pongo abe...   169   9e-42
sp|Q6P3H7|RBBP4_DANRE Histone-binding protein RBBP4 OS=Danio rer...   168   2e-41
sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus...   167   3e-41
sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rer...   166   7e-41
sp|Q54SD4|RBBD_DICDI Probable histone-binding protein rbbD OS=Di...   165   2e-40
sp|Q61Y48|LIN53_CAEBR Probable histone-binding protein lin-53 OS...   153   6e-37
sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS...   145   1e-34
sp|Q4P553|HAT2_USTMA Histone acetyltransferase type B subunit 2 ...   136   6e-32
sp|Q5KDT9|HAT2_CRYNE Histone acetyltransferase type B subunit 2 ...   131   3e-30
sp|P90917|RBA1_CAEEL Probable histone-binding protein rba-1 OS=C...   129   8e-30
sp|O22469|MSI3_ARATH WD-40 repeat-containing protein MSI3 OS=Ara...   125   1e-28
sp|O22468|MSI2_ARATH WD-40 repeat-containing protein MSI2 OS=Ara...   124   4e-28

>sp|O22467|MSI1_ARATH WD-40 repeat-containing protein MSI1
           OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1
          Length = 424

 Score =  212 bits (540), Expect = 9e-55
 Identities = 108/188 (57%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R + GGFGCA GKV+I QQINH+ EV+RARYMP NPFIIAT T++A VYVFDYSKHPS+P
Sbjct: 103 RSEFGGFGCATGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P +  C PDL+L G +++G GL+ S  K+G+LL+GSD+A+ICL ++ A P  ++ D A Q
Sbjct: 163 PLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLD-AQQ 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  L+HE+L GS+     LLIWD R PS  KP+ SV AH   VNCL  
Sbjct: 222 IFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAF 281

Query: 540 NPFNE*VL 563
           NPFNE V+
Sbjct: 282 NPFNEWVV 289


>sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1
           OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1
          Length = 424

 Score =  212 bits (539), Expect = 1e-54
 Identities = 111/189 (58%), Positives = 138/189 (73%), Gaps = 2/189 (1%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R + GGFGCANGKV+I QQINH+ EV+RARYMP NPFIIAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RSEFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKD-EAN 359
           P +  C PDLRL G +T+G GL+ S  K+G+LL+GSD++ ICL ++ A P  +NK  EA 
Sbjct: 163 PLDGACNPDLRLRGHSTEGYGLSWSQFKQGHLLSGSDDSHICLWDINATP--KNKALEAM 220

Query: 360 QIY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLP 536
           QI+  H   +EDVA  L+HE+L GS+     L +WD R PS  KP+ SV AH + VNCL 
Sbjct: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLA 280

Query: 537 VNPFNE*VL 563
            NPFNE V+
Sbjct: 281 FNPFNEWVV 289


>sp|Q9I8G9|RBBP7_CHICK Histone-binding protein RBBP7 OS=Gallus
           gallus GN=RBBP7 PE=1 SV=1
          Length = 424

 Score =  177 bits (450), Expect = 2e-44
 Identities = 93/188 (49%), Positives = 123/188 (65%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           +G+ GGFG   GK+    +INHE EV+RARYMP NP+IIAT T SA V VFDY+KHPS+P
Sbjct: 100 KGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKP 159

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
                C PDLRL G   +G GL+ +S  +G+LL+ SD+  +CL +++A P      +A  
Sbjct: 160 DPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA 219

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRP-SGDKPLHSVEAHPAYVNCLPV 539
           I+  H+  +EDVA  L HE L GS+     L+IWDTR  +  KP HSV+AH A VNCL  
Sbjct: 220 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSF 279

Query: 540 NPFNE*VL 563
           NP++E +L
Sbjct: 280 NPYSEFIL 287


>sp|Q8AVH1|RBBP7_XENLA Histone-binding protein RBBP7 OS=Xenopus
           laevis GN=rbbp7 PE=2 SV=1
          Length = 425

 Score =  176 bits (446), Expect = 7e-44
 Identities = 92/188 (48%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           +G+ GGFG  +GK+    +INHE EV+RARYMP NP IIAT T SA V VFDY+KHPS+P
Sbjct: 101 KGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKP 160

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
                C PDLRL G   +G GL+ +S   G+LL+ SD+  +CL +++A P      +A  
Sbjct: 161 DPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKA 220

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRP-SGDKPLHSVEAHPAYVNCLPV 539
           ++  H+  +EDVA  L HE L GS+     L+IWDTR  +  KP HSV+AH A VNCL  
Sbjct: 221 VFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSF 280

Query: 540 NPFNE*VL 563
           NP++E +L
Sbjct: 281 NPYSEFIL 288


>sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus
           tropicalis GN=rbbp7 PE=2 SV=1
          Length = 425

 Score =  176 bits (445), Expect = 9e-44
 Identities = 93/188 (49%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           +G+ GGFG  +GK+    +INHE EV+RARYMP NP IIAT T SA V VFDY+KHPS+P
Sbjct: 101 KGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKP 160

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
                C PDLRL G   +G GL+ +S   G+LL+ SD+  +CL +++A P      +A  
Sbjct: 161 DPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKA 220

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRP-SGDKPLHSVEAHPAYVNCLPV 539
           I+  H+  +EDVA  L HE L GS+     L+IWDTR  +  KP HSV+AH A VNCL  
Sbjct: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSF 280

Query: 540 NPFNE*VL 563
           NP++E +L
Sbjct: 281 NPYSEFIL 288


>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii
           GN=RBBP4 PE=2 SV=3
          Length = 425

 Score =  175 bits (444), Expect = 1e-43
 Identities = 93/188 (49%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           +G+ GGFG  +GK+ I  +INHE EV+RARYMP NP IIAT T S+ V VFDY+KHPS+P
Sbjct: 102 KGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKP 161

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
                C PDLRL G   +G GL+ +    G+LL+ SD+  ICL +++A P      +A  
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRPSG-DKPLHSVEAHPAYVNCLPV 539
           I+  HT  +EDV+  L HE L GS+     L+IWDTR +   KP HSV+AH A VNCL  
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281

Query: 540 NPFNE*VL 563
           NP++E +L
Sbjct: 282 NPYSEFIL 289


>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus
           GN=Rbbp4 PE=1 SV=4
          Length = 425

 Score =  175 bits (444), Expect = 1e-43
 Identities = 93/188 (49%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           +G+ GGFG  +GK+ I  +INHE EV+RARYMP NP IIAT T S+ V VFDY+KHPS+P
Sbjct: 102 KGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKP 161

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
                C PDLRL G   +G GL+ +    G+LL+ SD+  ICL +++A P      +A  
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRPSG-DKPLHSVEAHPAYVNCLPV 539
           I+  HT  +EDV+  L HE L GS+     L+IWDTR +   KP HSV+AH A VNCL  
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281

Query: 540 NPFNE*VL 563
           NP++E +L
Sbjct: 282 NPYSEFIL 289


>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens
           GN=RBBP4 PE=1 SV=3
          Length = 425

 Score =  175 bits (444), Expect = 1e-43
 Identities = 93/188 (49%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           +G+ GGFG  +GK+ I  +INHE EV+RARYMP NP IIAT T S+ V VFDY+KHPS+P
Sbjct: 102 KGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKP 161

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
                C PDLRL G   +G GL+ +    G+LL+ SD+  ICL +++A P      +A  
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRPSG-DKPLHSVEAHPAYVNCLPV 539
           I+  HT  +EDV+  L HE L GS+     L+IWDTR +   KP HSV+AH A VNCL  
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281

Query: 540 NPFNE*VL 563
           NP++E +L
Sbjct: 282 NPYSEFIL 289


>sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus
           gallus GN=RBBP4 PE=1 SV=3
          Length = 425

 Score =  175 bits (444), Expect = 1e-43
 Identities = 93/188 (49%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           +G+ GGFG  +GK+ I  +INHE EV+RARYMP NP IIAT T S+ V VFDY+KHPS+P
Sbjct: 102 KGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKP 161

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
                C PDLRL G   +G GL+ +    G+LL+ SD+  ICL +++A P      +A  
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRPSG-DKPLHSVEAHPAYVNCLPV 539
           I+  HT  +EDV+  L HE L GS+     L+IWDTR +   KP HSV+AH A VNCL  
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281

Query: 540 NPFNE*VL 563
           NP++E +L
Sbjct: 282 NPYSEFIL 289


>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus
           GN=RBBP4 PE=1 SV=3
          Length = 425

 Score =  175 bits (444), Expect = 1e-43
 Identities = 93/188 (49%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           +G+ GGFG  +GK+ I  +INHE EV+RARYMP NP IIAT T S+ V VFDY+KHPS+P
Sbjct: 102 KGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKP 161

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
                C PDLRL G   +G GL+ +    G+LL+ SD+  ICL +++A P      +A  
Sbjct: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRPSG-DKPLHSVEAHPAYVNCLPV 539
           I+  HT  +EDV+  L HE L GS+     L+IWDTR +   KP HSV+AH A VNCL  
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281

Query: 540 NPFNE*VL 563
           NP++E +L
Sbjct: 282 NPYSEFIL 289
tr_hit_id A9PHH9
Definition tr|A9PHH9|A9PHH9_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 185
Score (bit) 221.0
E-value 2.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949391|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_N21, 5'
         (565 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PHH9|A9PHH9_POPTR Putative uncharacterized protein OS=Popul...   221   2e-56
tr|B8LS29|B8LS29_PICSI Putative uncharacterized protein OS=Picea...   220   4e-56
tr|A9RJC1|A9RJC1_PHYPA Nucleosome remodeling factor, p48 subunit...   220   5e-56
tr|A8VFK7|A8VFK7_SOYBN MSI1 OS=Glycine max PE=2 SV=1                  216   5e-55
tr|A7Q577|A7Q577_VITVI Chromosome undetermined scaffold_52, whol...   214   2e-54
tr|A5BDM6|A5BDM6_VITVI Putative uncharacterized protein OS=Vitis...   214   2e-54
tr|B1ABR9|B1ABR9_9ASTR Multicopy suppressor of Ira1 OS=Hieracium...   212   1e-53
tr|B1ABR7|B1ABR7_HIEPI Multicopy suppressor of Ira1 OS=Hieracium...   212   1e-53
tr|B1ABR4|B1ABR4_9ASTR Multicopy suppressor of Ira1 OS=Hieracium...   212   1e-53
tr|Q1I184|Q1I184_PEA WD-40 repeat protein OS=Pisum sativum GN=MS...   211   2e-53
tr|Q2V4Z9|Q2V4Z9_WHEAT MSI OS=Triticum aestivum PE=2 SV=1             209   8e-53
tr|B0LUS9|B0LUS9_TOBAC Multicopy suppressor of IRA1 OS=Nicotiana...   209   8e-53
tr|Q10G81|Q10G81_ORYSJ Os03g0640100 protein OS=Oryza sativa subs...   207   3e-52
tr|Q8W514|Q8W514_MAIZE MSI type nucleosome/chromatin assembly fa...   206   7e-52
tr|Q6ASS7|Q6ASS7_ORYSJ MSI type nucleosome/chromatin assembly fa...   197   4e-49
tr|A2XJZ7|A2XJZ7_ORYSI Putative uncharacterized protein OS=Oryza...   197   4e-49
tr|Q00YD9|Q00YD9_OSTTA MSI type nucleosome/chromatin assembly fa...   183   6e-45
tr|A4S584|A4S584_OSTLU Predicted protein OS=Ostreococcus lucimar...   180   5e-44
tr|Q7QBC9|Q7QBC9_ANOGA AGAP003228-PA OS=Anopheles gambiae GN=AGA...   178   2e-43
tr|Q16UI5|Q16UI5_AEDAE Retinoblastoma-binding protein 4 (Rbbp4) ...   177   3e-43
tr|Q68EQ5|Q68EQ5_XENTR Rbbp7-prov protein OS=Xenopus tropicalis ...   176   1e-42
tr|A8J5R1|A8J5R1_CHLRE Nucleosome remodeling factor OS=Chlamydom...   176   1e-42
tr|B3S9N2|B3S9N2_TRIAD Retinoblastoma-binding protein 4 OS=Trich...   176   1e-42
tr|B5DFB2|B5DFB2_RAT Rbbp4 protein (RCG30896) OS=Rattus norvegic...   175   1e-42
tr|A2A875|A2A875_MOUSE Retinoblastoma binding protein 4 OS=Mus m...   175   1e-42
tr|B4GL99|B4GL99_DROPE GL12530 OS=Drosophila persimilis GN=GL125...   175   1e-42
tr|B4DRH0|B4DRH0_HUMAN cDNA FLJ53908, highly similar to Histone-...   175   1e-42
tr|B2R6G9|B2R6G9_HUMAN cDNA, FLJ92946, Homo sapiens retinoblasto...   175   1e-42
tr|Q8WPK1|Q8WPK1_OIKDI Retinoblastoma binding proteins 4-and 7-l...   175   2e-42
tr|B7P2S5|B7P2S5_IXOSC Retinoblastoma-binding protein, putative ...   175   2e-42

>tr|A9PHH9|A9PHH9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 424

 Score =  221 bits (563), Expect = 2e-56
 Identities = 113/185 (61%), Positives = 135/185 (72%), Gaps = 1/185 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R   GGFG ANGKV+I QQINH+ EV+RARYMP NPF+IAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RSDFGGFGAANGKVQIIQQINHDGEVNRARYMPQNPFMIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P +  C PDLRL G  T+G GL+ S  KEGYLL+GSD+A+ICL ++ A P  ++ D A Q
Sbjct: 163 PLDGACTPDLRLRGHNTEGYGLSWSKFKEGYLLSGSDDAQICLWDINATPKNKSLD-ATQ 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  L+HEHL GS+     LLIWD R PS  KP+HSV AH + VNCL  
Sbjct: 222 IFKVHEGVVEDVAWHLRHEHLFGSVGDDQYLLIWDLRTPSVTKPVHSVVAHQSEVNCLAF 281

Query: 540 NPFNE 554
           NPFNE
Sbjct: 282 NPFNE 286


>tr|B8LS29|B8LS29_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 421

 Score =  220 bits (561), Expect = 4e-56
 Identities = 114/188 (60%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           RG++GGFGCANGKV++ QQINH+ EV+RARYMP NPFIIAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RGEIGGFGCANGKVQVIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P +  C PDLRL G  T+G GL+ S  K G+LL+GSD+A+ICL ++ A P      EA Q
Sbjct: 163 PQDGGCNPDLRLRGHNTEGYGLSWSPFKHGHLLSGSDDAQICLWDINA-PAKNKVLEAQQ 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRPS-GDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  L+HE+L GS+     LLIWD R S  +KPLHSV AH   VNCL  
Sbjct: 222 IFKVHEGVVEDVAWHLRHEYLFGSVGDDRHLLIWDLRTSAANKPLHSVVAHQGEVNCLAF 281

Query: 540 NPFNE*VL 563
           NPFNE VL
Sbjct: 282 NPFNEWVL 289


>tr|A9RJC1|A9RJC1_PHYPA Nucleosome remodeling factor, p48 subunit
           OS=Physcomitrella patens subsp. patens GN=NFC1501 PE=4
           SV=1
          Length = 422

 Score =  220 bits (560), Expect = 5e-56
 Identities = 110/188 (58%), Positives = 139/188 (73%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           RG++GGFGC++GKV++ QQINHE EV+RARYMP N F IAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RGEMGGFGCSSGKVQVVQQINHEGEVNRARYMPQNQFYIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P + +C PD+RL G  T+G GL+ S +K+G+LL+GSD+A+ICL ++   P      EA Q
Sbjct: 163 PQDGQCNPDIRLRGHKTEGYGLSWSPIKDGHLLSGSDDAQICLWDIRGTPKQNRVIEALQ 222

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTRPS-GDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  ++HEHL GS+     LLIWDTR +  DKPLH+VEAH A VNCL  
Sbjct: 223 IFQGHVGVVEDVAWHVQHEHLFGSVGDDRQLLIWDTRAAPTDKPLHAVEAHQAEVNCLAF 282

Query: 540 NPFNE*VL 563
           NP NE VL
Sbjct: 283 NPKNEWVL 290


>tr|A8VFK7|A8VFK7_SOYBN MSI1 OS=Glycine max PE=2 SV=1
          Length = 425

 Score =  216 bits (551), Expect = 5e-55
 Identities = 111/188 (59%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R  +GGFGCANGKV+I QQINHE EV+RARYMP NPFIIAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RPDIGGFGCANGKVQIIQQINHEGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P +  C PDLRL G  T+G GL+ S  K+G+LL+GSD+A+ICL ++   P  ++  EA Q
Sbjct: 163 PLDGACNPDLRLRGHNTEGYGLSWSKFKQGHLLSGSDDAQICLWDINGTPKNKSL-EAMQ 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  L+HE+L GS+     LLIWD R P+  KP+ SV AH + VNCL  
Sbjct: 222 IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPAASKPVQSVVAHQSEVNCLAF 281

Query: 540 NPFNE*VL 563
           NPFNE V+
Sbjct: 282 NPFNEWVV 289


>tr|A7Q577|A7Q577_VITVI Chromosome undetermined scaffold_52, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00030810001 PE=4 SV=1
          Length = 424

 Score =  214 bits (546), Expect = 2e-54
 Identities = 114/189 (60%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R  VGGFGCANGKV+I QQINH+ EV+RARYMP N FIIAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RFDVGGFGCANGKVQIIQQINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKD-EAN 359
           P +  C PDLRL G +T+G GL+ S  K+G+LL+GSD+A+ICL ++ A P  +NK  EA 
Sbjct: 163 PLDGACSPDLRLRGHSTEGYGLSWSQFKQGHLLSGSDDAQICLWDINATP--KNKALEAQ 220

Query: 360 QIY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLP 536
           QI+  H   +EDVA  L+HE+L GS+     LLIWD R PS  KP+ SV AH + VNCL 
Sbjct: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPIQSVIAHQSEVNCLA 280

Query: 537 VNPFNE*VL 563
            NPFNE V+
Sbjct: 281 FNPFNEWVV 289


>tr|A5BDM6|A5BDM6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017853 PE=4 SV=1
          Length = 409

 Score =  214 bits (546), Expect = 2e-54
 Identities = 114/189 (60%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R  VGGFGCANGKV+I QQINH+ EV+RARYMP N FIIAT T+SA VYVFDYSKHPS+P
Sbjct: 88  RFDVGGFGCANGKVQIIQQINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKP 147

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKD-EAN 359
           P +  C PDLRL G +T+G GL+ S  K+G+LL+GSD+A+ICL ++ A P  +NK  EA 
Sbjct: 148 PLDGACSPDLRLRGHSTEGYGLSWSQFKQGHLLSGSDDAQICLWDINATP--KNKALEAQ 205

Query: 360 QIY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLP 536
           QI+  H   +EDVA  L+HE+L GS+     LLIWD R PS  KP+ SV AH + VNCL 
Sbjct: 206 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPIQSVIAHQSEVNCLA 265

Query: 537 VNPFNE*VL 563
            NPFNE V+
Sbjct: 266 FNPFNEWVV 274


>tr|B1ABR9|B1ABR9_9ASTR Multicopy suppressor of Ira1 OS=Hieracium
           caespitosum GN=MSI1 PE=2 SV=1
          Length = 423

 Score =  212 bits (540), Expect = 1e-53
 Identities = 111/188 (59%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R   GGFGCANGKV+I QQINH+ EV+RARYMP NPFIIAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P +  C PDLRL G  T+G GL+ S  K+G+LL+GSD+A+ICL ++   P  ++ D A Q
Sbjct: 163 PLDGACSPDLRLRGHNTEGYGLSWSKFKQGHLLSGSDDAQICLWDINGTPKNKSLD-AMQ 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  L+HE+L GS      L IWD R PS  KP+ SV AH + VNCL  
Sbjct: 222 IFKVHDGVVEDVAWHLRHEYLFGSCGDDQYLHIWDLRSPSVTKPIQSVMAHQSEVNCLAF 281

Query: 540 NPFNE*VL 563
           NPFNE VL
Sbjct: 282 NPFNEWVL 289


>tr|B1ABR7|B1ABR7_HIEPI Multicopy suppressor of Ira1 OS=Hieracium
           piloselloides GN=MSI1 PE=2 SV=1
          Length = 423

 Score =  212 bits (540), Expect = 1e-53
 Identities = 111/188 (59%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R   GGFGCANGKV+I QQINH+ EV+RARYMP NPFIIAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P +  C PDLRL G  T+G GL+ S  K+G+LL+GSD+A+ICL ++   P  ++ D A Q
Sbjct: 163 PLDGACSPDLRLRGHNTEGYGLSWSKFKQGHLLSGSDDAQICLWDINGTPKNKSLD-AMQ 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  L+HE+L GS      L IWD R PS  KP+ SV AH + VNCL  
Sbjct: 222 IFKVHDGVVEDVAWHLRHEYLFGSCGDDRYLHIWDLRSPSVTKPIQSVMAHQSEVNCLAF 281

Query: 540 NPFNE*VL 563
           NPFNE VL
Sbjct: 282 NPFNEWVL 289


>tr|B1ABR4|B1ABR4_9ASTR Multicopy suppressor of Ira1 OS=Hieracium
           pilosella GN=MSI1 PE=2 SV=1
          Length = 423

 Score =  212 bits (540), Expect = 1e-53
 Identities = 111/188 (59%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R   GGFGCANGKV+I QQINH+ EV+RARYMP NPFIIAT T+SA VYVFDYSKHPS+P
Sbjct: 103 RSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKP 162

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P +  C PDLRL G  T+G GL+ S  K+G+LL+GSD+A+ICL ++   P  ++ D A Q
Sbjct: 163 PLDGACSPDLRLRGHNTEGYGLSWSKFKQGHLLSGSDDAQICLWDINGTPKNKSLD-AMQ 221

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  L+HE+L GS      L IWD R PS  KP+ SV AH + VNCL  
Sbjct: 222 IFKVHDGVVEDVAWHLRHEYLFGSCGDDQYLHIWDLRSPSVTKPIQSVMAHQSEVNCLAF 281

Query: 540 NPFNE*VL 563
           NPFNE VL
Sbjct: 282 NPFNEWVL 289


>tr|Q1I184|Q1I184_PEA WD-40 repeat protein OS=Pisum sativum GN=MSI1
           PE=2 SV=1
          Length = 425

 Score =  211 bits (538), Expect = 2e-53
 Identities = 111/188 (59%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   RGKVGGFGCANGKVRITQQINHEWEVSRARYMPHNPFIIATNTISA*VYVFDYSKHPSQP 182
           R +VGGFGCANGKV+I QQINH+ EV+RARYMP N FIIAT TISA VYVFDYSKHPS+P
Sbjct: 105 RPEVGGFGCANGKVQIIQQINHDGEVNRARYMPQNNFIIATKTISAEVYVFDYSKHPSKP 164

Query: 183 PHERRCLPDLRLPGRTTKG*GLTCSSLKEGYLLTGSDEARICLSNLTANPHGQNKDEANQ 362
           P +  C PDLRL G  T+G GL+ S+ K+G+LL+GSD+A+ICL ++   P  ++ D A Q
Sbjct: 165 PLDGSCNPDLRLRGHNTEGYGLSWSTFKQGHLLSGSDDAQICLWDINGTPKNKSLD-AMQ 223

Query: 363 IY*YHTEFMEDVACQLKHEHLSGSIRHKCMLLIWDTR-PSGDKPLHSVEAHPAYVNCLPV 539
           I+  H   +EDVA  L+HE+L GS+     LLIWD R PS  KP+ S  AH + VNCL  
Sbjct: 224 IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVTKPVQSCIAHSSEVNCLAF 283

Query: 540 NPFNE*VL 563
           NPFNE V+
Sbjct: 284 NPFNEWVV 291