BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949283|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_J06, 5'
         (618 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P16275|IFEB_HELPO Non-neuronal cytoplasmic intermediate filam...    39   0.028
sp|P22488|IFEA_HELAS Non-neuronal cytoplasmic intermediate filam...    38   0.048
sp|P19736|PRP9_YEAST Pre-mRNA-splicing factor PRP9 OS=Saccharomy...    36   0.18 
sp|P28976|RRPL_TSWV1 RNA-directed RNA polymerase OS=Tomato spott...    35   0.24 
sp|Q96KN7|RPGR1_HUMAN X-linked retinitis pigmentosa GTPase regul...    35   0.24 
sp|O32265|YVZA_BACSU Uncharacterized protein yvzA OS=Bacillus su...    35   0.40 
sp|Q8PT12|SERC_METMA Phosphoserine aminotransferase OS=Methanosa...    34   0.53 
sp|A8EUE3|SECA_ARCB4 Protein translocase subunit secA OS=Arcobac...    34   0.53 
sp|Q8CHG3|GCC2_MOUSE GRIP and coiled-coil domain-containing prot...    34   0.53 
sp|Q3USS3|CB039_MOUSE UPF0407 protein C2orf39 homolog OS=Mus mus...    34   0.69 
sp|Q32PN7|DZI1L_DANRE Zinc finger protein DZIP1L OS=Danio rerio ...    33   0.90 
sp|Q03281|YD458_YEAST Uncharacterized protein YDR458C OS=Sacchar...    33   1.5  
sp|Q8TNI1|SERC_METAC Phosphoserine aminotransferase OS=Methanosa...    32   2.0  
sp|A3CV35|PSMR_METMJ Proteasome-activating nucleotidase OS=Metha...    32   2.0  
sp|A6KYR3|SYM_BACV8 Methionyl-tRNA synthetase OS=Bacteroides vul...    32   2.6  
sp|A2AQ25|SKT_MOUSE Sickle tail protein OS=Mus musculus GN=Skt P...    32   2.6  
sp|Q5UQL0|YL410_MIMIV Putative core protein L410 OS=Acanthamoeba...    32   3.4  
sp|P63398|Y1303_MYCBO Uncharacterized ABC transporter ATP-bindin...    32   3.4  
sp|P63397|Y1272_MYCTU Uncharacterized ABC transporter ATP-bindin...    32   3.4  
sp|Q99PS0|K1C23_MOUSE Keratin, type I cytoskeletal 23 OS=Mus mus...    32   3.4  
sp|P52878|SERC_METBF Phosphoserine aminotransferase OS=Methanosa...    31   4.5  
sp|O61308|PUMA_PARUN 227 kDa spindle- and centromere-associated ...    31   4.5  
sp|Q02455|MLP1_YEAST Protein MLP1 OS=Saccharomyces cerevisiae GN...    31   4.5  
sp|A2AGT5|CKAP5_MOUSE Cytoskeleton-associated protein 5 OS=Mus m...    31   4.5  
sp|Q7T0Y4|CB039_XENLA UPF0407 protein C2orf39 homolog OS=Xenopus...    31   4.5  
sp|O59672|YB89_SCHPO Uncharacterized ABC transporter ATP-binding...    31   5.8  
sp|Q8A3M1|SYM_BACTN Methionyl-tRNA synthetase OS=Bacteroides the...    31   5.8  
sp|P17855|STC2_STAAU Staphylocoagulase OS=Staphylococcus aureus ...    31   5.8  
sp|Q5T5P2|SKT_HUMAN Sickle tail protein homolog OS=Homo sapiens ...    31   5.8  
sp|Q5ZKQ3|RPAP3_CHICK RNA polymerase II-associated protein 3 OS=...    31   5.8  

>sp|P16275|IFEB_HELPO Non-neuronal cytoplasmic intermediate filament
           protein B OS=Helix pomatia PE=1 SV=1
          Length = 450

 Score = 38.5 bits (88), Expect = 0.028
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = +2

Query: 122 RNRKKASLQQLKSRYLAEIEEWEKLFQKLDKP---SESK--DFQKELPNLTVLESPIVDL 286
           RNRK  SLQ ++  Y  E+ +  K+  +L      SE+K    Q E+ +L  L     + 
Sbjct: 107 RNRKSESLQPIRDAYENELAQARKVIDELSSTKGVSEAKVAGLQDEIASLRELIGTYENQ 166

Query: 287 SEEKFKNMVEKLSYQVIQLEKFMEDLRILCSDVE 388
           S++ ++  +E L  Q+ + E  +  LRI C  +E
Sbjct: 167 SKD-YRKKIESLGNQIGEYEGELHTLRIRCGSLE 199


>sp|P22488|IFEA_HELAS Non-neuronal cytoplasmic intermediate filament
           protein OS=Helix aspersa PE=3 SV=2
          Length = 576

 Score = 37.7 bits (86), Expect = 0.048
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = +2

Query: 122 RNRKKASLQQLKSRYLAEIEEWEKLFQKLDKP---SESK--DFQKELPNLTVLESPIVDL 286
           RNRK  SLQ ++  Y  E+ +  K+  +L      SE+K    Q E+ +L  L     + 
Sbjct: 109 RNRKSESLQPIRDAYENELAQARKVIDELSSTKGVSEAKVAGLQDEIASLRELIVTYENQ 168

Query: 287 SEEKFKNMVEKLSYQVIQLEKFMEDLRILCSDVE 388
           S++ ++  +E L  Q+ + E  +  LRI C  +E
Sbjct: 169 SKD-YRKKIESLGNQIGEYEGELHTLRIRCGSLE 201


>sp|P19736|PRP9_YEAST Pre-mRNA-splicing factor PRP9 OS=Saccharomyces
           cerevisiae GN=PRP9 PE=1 SV=1
          Length = 530

 Score = 35.8 bits (81), Expect = 0.18
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +2

Query: 110 KHWRRNRKKASLQQLKSR-YLAEIEEWEKLFQKLDKPSESKDFQKELPNLTVLESPIVDL 286
           K  +R RK+  LQQ +   +L + +E ++ F K+++P E+++  K+LPN    E  +  L
Sbjct: 63  KKVKRKRKQIILQQHEINIFLRDYQEKQQTFNKINRPEETQEDDKDLPN---FERKLQQL 119

Query: 287 SEEKFKNMVEKLSYQV 334
            E++ KN  E     +
Sbjct: 120 -EKELKNEDENFELDI 134


>sp|P28976|RRPL_TSWV1 RNA-directed RNA polymerase OS=Tomato spotted
           wilt virus (strain Brazilian Br-01) GN=L PE=3 SV=1
          Length = 2875

 Score = 35.4 bits (80), Expect = 0.24
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
 Frame = +2

Query: 134 KASLQQLKSRYLAEIEEWEKLFQK-----LDKPSESKDFQKELPNLTVLESPIVDLSEEK 298
           KA L  LK   + + + WE L+ K     + +  E K  +KE+P++T   +      EE+
Sbjct: 395 KADLADLKDHLIQKQQIWESLYGKHLEKIMLRIREKKRKEKEIPDITTAFNQNAAEYEER 454

Query: 299 FKNMVEKLSYQVIQLEKFMEDLRI-LCSDVECICKPPDGYRELIKS 433
           + N    LS   +     +  L+I L S+V+      + +RE  KS
Sbjct: 455 YPNCFNDLSELKLTFHDLVPSLKIELSSEVDYNNAIINKFRESFKS 500


>sp|Q96KN7|RPGR1_HUMAN X-linked retinitis pigmentosa GTPase
           regulator-interacting protein 1 OS=Homo sapiens
           GN=RPGRIP1 PE=1 SV=1
          Length = 1286

 Score = 35.4 bits (80), Expect = 0.24
 Identities = 30/102 (29%), Positives = 48/102 (47%)
 Frame = +2

Query: 188 EKLFQKLDKPSESKDFQKELPNLTVLESPIVDLSEEKFKNMVEKLSYQVIQLEKFMEDLR 367
           E+L Q++ +  +  D + E     +LE     LS EK +N   KL    I L+K  +++ 
Sbjct: 404 EQLQQQVSQLQDQLDAELEDKRKVLLE-----LSREKAQNEDLKLEVTNI-LQKHKQEVE 457

Query: 368 ILCSDVECICKPPDGYRELIKSPRVLVDGLSASPDTPCDEEE 493
           +L  +   I +PPD   E    P VL +     P  P ++EE
Sbjct: 458 LL-QNAATISQPPDRQSEPATHPAVLQENTQIEPSEPKNQEE 498


>sp|O32265|YVZA_BACSU Uncharacterized protein yvzA OS=Bacillus
           subtilis GN=yvzA PE=4 SV=1
          Length = 119

 Score = 34.7 bits (78), Expect = 0.40
 Identities = 20/80 (25%), Positives = 40/80 (50%)
 Frame = +2

Query: 11  EIVNDDGLIYKRQKRELNLSSEVHDPPVQPHIDKHWRRNRKKASLQQLKSRYLAEIEEWE 190
           EI    GLI K+ K+EL  +SE                 ++KA+LQ +K  + A+++ ++
Sbjct: 53  EIKGQKGLIVKKIKKELESNSE-----------------KRKAALQMIKEEHTAKVDRYK 95

Query: 191 KLFQKLDKPSESKDFQKELP 250
            + + L +   +  ++K+ P
Sbjct: 96  MIIEDLRQQDVTLTYRKKKP 115


>sp|Q8PT12|SERC_METMA Phosphoserine aminotransferase
           OS=Methanosarcina mazei GN=serC PE=3 SV=1
          Length = 370

 Score = 34.3 bits (77), Expect = 0.53
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 11/62 (17%)
 Frame = +2

Query: 278 VDLSEEKFKNMV-----EKLSYQVIQLEKFMEDLRILC------SDVECICKPPDGYREL 424
           VDLSEEK K ++     EK++Y +         LRI C       D+EC+C+  +   +L
Sbjct: 309 VDLSEEKLKELIKMLENEKVAYDIGSYRDAPSGLRIWCGATIEKEDLECLCEWIEWAYDL 368

Query: 425 IK 430
           +K
Sbjct: 369 VK 370


>sp|A8EUE3|SECA_ARCB4 Protein translocase subunit secA OS=Arcobacter
           butzleri (strain RM4018) GN=secA PE=3 SV=1
          Length = 872

 Score = 34.3 bits (77), Expect = 0.53
 Identities = 17/48 (35%), Positives = 30/48 (62%)
 Frame = +2

Query: 221 ESKDFQKELPNLTVLESPIVDLSEEKFKNMVEKLSYQVIQLEKFMEDL 364
           E K ++K+   +T LES   DLS+++ KN  +KL   V + EK ++++
Sbjct: 16  EVKKYRKKADAITALESKYTDLSDDELKNEFQKLKELVQKGEKTLDNV 63


>sp|Q8CHG3|GCC2_MOUSE GRIP and coiled-coil domain-containing protein
           2 OS=Mus musculus GN=Gcc2 PE=1 SV=2
          Length = 1679

 Score = 34.3 bits (77), Expect = 0.53
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +2

Query: 113 HWRRNRKKASLQ-QLKSRYLAEIEEWEKLFQKLDKPSESKDFQKELPNLTVLESPIVDLS 289
           H   +++ A LQ +L+     ++E  E+L  + D     +  Q+E+ N+T      +   
Sbjct: 141 HSEHSKETAILQKELEEAVHKQVELREQLKSQSDSEDNVRKLQEEIQNITAAFEEQISCL 200

Query: 290 EEKFKNMVEKLSYQVIQLEKFMED 361
           E+K +   ++   ++I L+K +ED
Sbjct: 201 EKKLEATSDEKQQEIIHLQKVIED 224


>sp|Q3USS3|CB039_MOUSE UPF0407 protein C2orf39 homolog OS=Mus
           musculus GN=Gm1060 PE=2 SV=1
          Length = 753

 Score = 33.9 bits (76), Expect = 0.69
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
 Frame = +2

Query: 41  KRQKRELNLSSEVHDPPVQ-PHIDKHWRRNRKKASLQQL------KSRYLAE-IEEWEKL 196
           KRQ+ E  L +EV     +   I   W   R+K   Q+L      +  + AE IE+  KL
Sbjct: 116 KRQRLE-KLENEVKTSQDKFDEITAKWEEGRRKRIPQELWEMLNSQQVHCAELIEDKNKL 174

Query: 197 FQKLDKPSESKDFQ--KELPNLTVLESPIVDLSEEKFKNMVEKLSYQVIQLEKFMEDLR 367
             +L +  + KD Q  K+L   +   + I++  EE+ KN+++    ++I +EK  E  R
Sbjct: 175 ANELQQELKIKDDQYVKDLKKQSEDITLILERMEEQVKNVMKNFRQELIHIEKAFESER 233

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK949283|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_J06, 5'
         (618 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PM11|A7PM11_VITVI Chromosome chr14 scaffold_21, whole genom...    72   2e-11
tr|A9NMC9|A9NMC9_PICSI Putative uncharacterized protein OS=Picea...    66   1e-09
tr|A9PC69|A9PC69_POPTR Putative uncharacterized protein OS=Popul...    62   3e-08
tr|Q9LT60|Q9LT60_ARATH Genomic DNA, chromosome 3, P1 clone: MMJ2...    56   2e-06
tr|Q8LF87|Q8LF87_ARATH Putative uncharacterized protein (Putativ...    56   2e-06
tr|Q6ZI57|Q6ZI57_ORYSJ Putative uncharacterized protein OJ1126_D...    48   4e-04
tr|Q0DZW2|Q0DZW2_ORYSJ Os02g0595300 protein OS=Oryza sativa subs...    48   4e-04
tr|A2X6Q7|A2X6Q7_ORYSI Putative uncharacterized protein OS=Oryza...    48   4e-04
tr|A9RY31|A9RY31_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.003
tr|Q23DH8|Q23DH8_TETTH DNA-directed RNA polymerase, omega subuni...    42   0.038
tr|B6S324|B6S324_9BILA Smc-like protein OS=Philodina roseola PE=...    41   0.049
tr|Q4SBT0|Q4SBT0_TETNG Chromosome 19 SCAF14664, whole genome sho...    40   0.11 
tr|A0E591|A0E591_PARTE Chromosome undetermined scaffold_79, whol...    40   0.11 
tr|A3LUB7|A3LUB7_PICST Phosphatidylinositol-4-phosphate 5-kinase...    40   0.14 
tr|A9SSC8|A9SSC8_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.32 
tr|Q1LX88|Q1LX88_DANRE Novel protein similar to vertebrate picco...    38   0.42 
tr|Q1LX87|Q1LX87_DANRE Novel protein similar to vertebrate picco...    38   0.42 
tr|A2EN31|A2EN31_TRIVA Viral A-type inclusion protein, putative ...    38   0.42 
tr|A0BZ83|A0BZ83_PARTE Chromosome undetermined scaffold_139, who...    38   0.42 
tr|A8V4T9|A8V4T9_9AQUI 2-isopropylmalate synthase (Fragment) OS=...    37   0.71 
tr|Q4R699|Q4R699_MACFA Testis cDNA, clone: QtsA-18670, similar t...    37   0.71 
tr|B0KDB5|B0KDB5_THEP3 SMC domain protein OS=Thermoanaerobacter ...    37   0.93 
tr|B0K215|B0K215_THEPX SMC domain protein OS=Thermoanaerobacter ...    37   0.93 
tr|B0EUE0|B0EUE0_ENTDI Alpha-actinin, putative OS=Entamoeba disp...    37   0.93 
tr|A0DA96|A0DA96_PARTE Chromosome undetermined scaffold_43, whol...    37   0.93 
tr|A8J3J3|A8J3J3_CHLRE Predicted protein OS=Chlamydomonas reinha...    36   1.6  
tr|Q22RL2|Q22RL2_TETTH Putative uncharacterized protein OS=Tetra...    36   1.6  
tr|A8SXI5|A8SXI5_9FIRM Putative uncharacterized protein OS=Copro...    36   2.1  
tr|A3HZ47|A3HZ47_9SPHI Endo-1,4-beta-xylanase OS=Algoriphagus sp...    36   2.1  
tr|B6T2A2|B6T2A2_MAIZE Putative uncharacterized protein OS=Zea m...    36   2.1  

>tr|A7PM11|A7PM11_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020643001
           PE=4 SV=1
          Length = 174

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
 Frame = +2

Query: 2   EGWEIVNDDGLIYKRQKRELNLSSEVHDPPV-QPHIDKHWRRNRKKASLQQLKSRYLAEI 178
           + WE+ NDDG +YKR+KR L+       PP+  P  ++  RR RKK +L ++K +Y  EI
Sbjct: 8   DDWELCNDDGFVYKRKKRRLDALPVAPAPPLPDPQAEEDHRRERKKRALIKIKEKYQREI 67

Query: 179 EEWEKLFQKLDKPSESKDFQ--KELPNLTVLESPIVDLSEEKF--KNMVEKLSYQVIQLE 346
           + WE L   L    E+   Q  ++      L  P+ D    +F  + +V++L  Q    E
Sbjct: 68  DHWEHLSNTLRAMEETAHQQQRRQQHEQASLSLPLADSPSSEFVCRTLVDELLLQAEAQE 127

Query: 347 KFMEDLRILCSDVECICKPPD 409
             + D+  LC   E +    D
Sbjct: 128 AIIHDVSNLCDVAEAMYNVQD 148


>tr|A9NMC9|A9NMC9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 191

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
 Frame = +2

Query: 8   WEIVNDDGLIYKRQKRELNLSSEVHDPPVQP-------HIDKHWRRNR---KKASLQQLK 157
           WE+VNDDG +YKR+KR+ +       PP  P         D+ + R R   KKA+L  LK
Sbjct: 22  WEVVNDDGFVYKRRKRKNDA-----PPPPSPISTGNTTANDEQYLRQRRLLKKAALLNLK 76

Query: 158 SRYLAEIEEWEKLFQKLDKPSESKDFQKELPNLTVLESPIVDLSEEKFKNMVEKLSYQVI 337
           ++Y  EI EWE L Q     S S     + P  +    P       + K ++ +L  Q  
Sbjct: 77  AKYAQEIREWESLSQMSQSRSTSAITSTKDPVPSSSSLPRTQTQNAR-KCILMELLKQAE 135

Query: 338 QLEKFMEDLRILCSDVECICKPPDGYRELIKSP 436
             E F++D+  +C  VE IC   + + + +K P
Sbjct: 136 AQEDFIQDVTSICGAVELIC---EAHEQDLKQP 165


>tr|A9PC69|A9PC69_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 177

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
 Frame = +2

Query: 2   EGWEIVNDD-GLIYKRQKRE--LNLSSEVHDPP-VQPHIDKHWRRNRKKASLQQLKSRYL 169
           E WE+ +DD G  YK  KR+   + S+ V   P   P ++   RR RK+ +L +LK++Y 
Sbjct: 11  EEWELRHDDDGFTYKILKRQRLTDPSAAVSQLPFTDPKVEAKRRRERKRNTLLKLKNQYQ 70

Query: 170 AEIEEWEKLFQKLDKPSE-SKDFQKELPNLTVLESPIVDLSEEKFKNMVEKLSYQVIQLE 346
            EI +WE L   L    E +K+  + +  L    S +V  SE+   ++V++L  Q    E
Sbjct: 71  NEIHKWEVLSNTLRSMEEKTKEVNQAVSYLGSSNSSVVKKSEDSSGSLVDELLLQAETQE 130

Query: 347 KFMEDLRILCSDVECIC 397
             + D+  LC   E +C
Sbjct: 131 AIIRDISNLCDVAEAMC 147


>tr|Q9LT60|Q9LT60_ARATH Genomic DNA, chromosome 3, P1 clone: MMJ24
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 222

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +2

Query: 2   EGWEIVNDDGLIYKRQKRELNLSSEVHDPPVQPHIDK----HWRRNRKKASLQQLKSRYL 169
           E WE   DDG +Y R+KR     +E    P  P +D+      RR RKK  L +LK +Y 
Sbjct: 38  EDWECYEDDGFVYNRKKRTRFADAEETSKPPDPELDRVVEERNRRIRKKRLLVKLKRKYQ 97

Query: 170 AEIEEWEKLFQKLDKPSESKD 232
           +EI++WE L    +   E  D
Sbjct: 98  SEIDQWEILSNSFNAMQEKAD 118


>tr|Q8LF87|Q8LF87_ARATH Putative uncharacterized protein (Putative
           uncharacterized protein At3g27520) (Putative
           uncharacterized protein At3g27520/MMJ24_6)
           OS=Arabidopsis thaliana GN=At3g27520/MMJ24_6 PE=2 SV=1
          Length = 198

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +2

Query: 2   EGWEIVNDDGLIYKRQKRELNLSSEVHDPPVQPHIDK----HWRRNRKKASLQQLKSRYL 169
           E WE   DDG +Y R+KR     +E    P  P +D+      RR RKK  L +LK +Y 
Sbjct: 14  EDWECYEDDGFVYNRKKRTRFADAEETSKPPDPELDRVVEERNRRIRKKRLLVKLKRKYQ 73

Query: 170 AEIEEWEKLFQKLDKPSESKD 232
           +EI++WE L    +   E  D
Sbjct: 74  SEIDQWEILSNSFNAMQEKAD 94


>tr|Q6ZI57|Q6ZI57_ORYSJ Putative uncharacterized protein
           OJ1126_D09.25 OS=Oryza sativa subsp. japonica
           GN=OJ1126_D09.25 PE=4 SV=1
          Length = 206

 Score = 48.1 bits (113), Expect = 4e-04
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
 Frame = +2

Query: 2   EGWEIVNDDGLIYKRQK----------RELNLSSEVHDPPVQPHIDKHWRRNRKKASLQQ 151
           E WEI N DG +YKR++               +S    PP +  +     R R++ +L +
Sbjct: 8   EDWEICNCDGFVYKRRRVLHPPDLEDAAATAATSSAPGPPPEAVL-----RRRRRQALLR 62

Query: 152 LKSRYLAEIEEWEKLFQKLDKP---SESKDFQKELPNLTVLESPIVDLSEEKFK-NMVEK 319
           L++RYL E+  WE L   +  P   + + D     P+  V  SP    S       +++ 
Sbjct: 63  LRARYLDELSRWESLSSDVLAPLPAAPAADLPPRPPSDPVAASPPPGSSSSSSDLTVIDG 122

Query: 320 LSYQVIQLEKFMEDLRILCSDVECIC 397
           L  Q    E+ ++ L  +C +++  C
Sbjct: 123 LLAQAEVTEQLLKRLTEVCDEIDEFC 148


>tr|Q0DZW2|Q0DZW2_ORYSJ Os02g0595300 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0595300 PE=4 SV=1
          Length = 327

 Score = 48.1 bits (113), Expect = 4e-04
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
 Frame = +2

Query: 2   EGWEIVNDDGLIYKRQK----------RELNLSSEVHDPPVQPHIDKHWRRNRKKASLQQ 151
           E WEI N DG +YKR++               +S    PP +  +     R R++ +L +
Sbjct: 8   EDWEICNCDGFVYKRRRVLHPPDLEDAAATAATSSAPGPPPEAVL-----RRRRRQALLR 62

Query: 152 LKSRYLAEIEEWEKLFQKLDKP---SESKDFQKELPNLTVLESPIVDLSEEKFK-NMVEK 319
           L++RYL E+  WE L   +  P   + + D     P+  V  SP    S       +++ 
Sbjct: 63  LRARYLDELSRWESLSSDVLAPLPAAPAADLPPRPPSDPVAASPPPGSSSSSSDLTVIDG 122

Query: 320 LSYQVIQLEKFMEDLRILCSDVECIC 397
           L  Q    E+ ++ L  +C +++  C
Sbjct: 123 LLAQAEVTEQLLKRLTEVCDEIDEFC 148


>tr|A2X6Q7|A2X6Q7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07896 PE=4 SV=1
          Length = 326

 Score = 48.1 bits (113), Expect = 4e-04
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
 Frame = +2

Query: 2   EGWEIVNDDGLIYKRQK----------RELNLSSEVHDPPVQPHIDKHWRRNRKKASLQQ 151
           E WEI N DG +YKR++               +S    PP +  +     R R++ +L +
Sbjct: 8   EDWEICNCDGFVYKRRRVLHPPDLEDAAAAAAASSAPGPPPEAVL-----RRRRRQALLR 62

Query: 152 LKSRYLAEIEEWEKLFQKLDKP---SESKDFQKELPNLTVLESPIVDLSEEKFK-NMVEK 319
           L++RYL E+  WE L   +  P   + + D     P+  V  SP    S       +++ 
Sbjct: 63  LRARYLDELSRWESLSSDVLAPLPAAPAADLPPRPPSDPVAASPPPGSSSSSSDLTVIDG 122

Query: 320 LSYQVIQLEKFMEDLRILCSDVECIC 397
           L  Q    E+ ++ L  +C +++  C
Sbjct: 123 LLAQAEVTEQLLKRLTEVCDEIDEFC 148


>tr|A9RY31|A9RY31_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_72052 PE=4 SV=1
          Length = 182

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
 Frame = +2

Query: 8   WEIVNDDGLIYKRQKRELNLSSEVHDPPV-----------QPHIDKHWRRNRKKASLQQL 154
           +E VNDDG ++K +KR L    E++  P+           +P  ++  +  +K   L  L
Sbjct: 6   FETVNDDGFVFKVRKRRLE---EINVKPLAVKEGQRHEDQEPVEEQSVKLEKKAKRLMTL 62

Query: 155 KSRYLAEIEEWEKLFQKLDKPSESKDFQKELPNLTVLESPIVDLSEEKFKNMVEKLSYQV 334
           K+ Y AE+E W+KL +    P   +   ++ P+     SP  DL  E     +++L  +V
Sbjct: 63  KAMYEAELEAWKKLEEAAAPPVPDEPSSEKSPS-----SPEHDLHAE----FLKELKIEV 113

Query: 335 IQLEKFMEDLR 367
             +E++++ L+
Sbjct: 114 ENVEEYIKRLQ 124


>tr|Q23DH8|Q23DH8_TETTH DNA-directed RNA polymerase, omega subunit
            family protein OS=Tetrahymena thermophila SB210
            GN=TTHERM_00047130 PE=4 SV=1
          Length = 4331

 Score = 41.6 bits (96), Expect = 0.038
 Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
 Frame = +2

Query: 17   VNDDGLIYKRQKRELNLSSEVHDPPVQPHIDKHWRRNRKKASLQQLKSRYLAEIEEW--- 187
            +  + ++ ++Q+ E +L SE      Q ++D H      KA +QQ+K + L+++EE    
Sbjct: 3243 IEGNHILSQKQQEEKDLVSENSQNLQQQNLDLHKENEESKAKIQQMKEK-LSQLEEQIEK 3301

Query: 188  ----------EKLFQKLDKPSESKDFQKELPNLTVLESPIVDLSEEKFKNMVEKLSYQVI 337
                      E    +++K +E ++ +KE+  L V    +  + EE+     +++    +
Sbjct: 3302 VNDDKQKSQEENEKMRIEKETEIEEKEKEIQKLKVQIQDLEGVMEEQ----TQQIQTANV 3357

Query: 338  QLEKFMEDL 364
            ++EKF +DL
Sbjct: 3358 EVEKFKKDL 3366