DK949090
Clone id TST38A01NGRL0005_A24
Library
Length 628
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0005_A24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTC
ATCATTCCCTGAGTTTTCTATTTAGATAACTTGAGTGGTGATGATGAGTTTTTTACAAAA
GTCTAAGAGCCACAAAAGTGGCTTTTCGTTTTACAAGACTAGTGTTAAACTGAACGAAAA
ACCGAACTTTGGAAAAAGCTGCCTCCTTCGCTATGCTCAAAAACCTATATCCACTCATTT
GGCTTCATGTGCAAATGAAAATAATCATCTCTGATACCCAACGCTTGCTTTACTCTTGGC
ACACCCAACAAAAGAGTCATAATAACGAACGGTTCACAACGACCCAGAAAAAAAATTACA
AAACTGCTAAGTCTGCAGCTGTCCCATTGGCAGAGCACAAAGTGCAGAAGTGCTTACTCA
TGAAAAGAAGCCTAACTCTTCAATCTGGCGACACCACATGCTGTCCCTCGTTTGATCGCA
GAGCATTTATTTGACTGGGCCCTCAATTGAACGCCTACTCTTATCAAATGTCTGGCTACT
TCTTTGTCTAAAAAACAACTTGACAACCTTGTTCCAACATCAATGTGAAATTCGTATCCT
CTGCTGTCGGACCCGTGAATTGTATGGG
■■Homology search results ■■ -
sp_hit_id Q2GF50
Definition sp|Q2GF50|SECA_EHRCR Protein translocase subunit secA OS=Ehrlichia chaffeensis (strain Arkansas)
Align length 68
Score (bit) 31.6
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949090|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_A24, 5'
(573 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2GF50|SECA_EHRCR Protein translocase subunit secA OS=Ehrlich... 32 2.9
sp|Q8HYY4|UACA_BOVIN Uveal autoantigen with coiled-coil domains ... 30 6.5
sp|P21343|PFPB_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosp... 30 6.6

>sp|Q2GF50|SECA_EHRCR Protein translocase subunit secA OS=Ehrlichia
chaffeensis (strain Arkansas) GN=secA PE=3 SV=1
Length = 862

Score = 31.6 bits (70), Expect = 2.9
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +2

Query: 140 KAASFAMLKNL----YPLI---WLHVQMKIIISDTQRLLYSWHTQQKSHNNERFTTTQKK 298
KA +F+ML+N+ Y LI H++ I ++DTQR+ Y+ H K NE+ K
Sbjct: 796 KAEAFSMLENMMSKFYELIIQRLSHLKFDIELNDTQRIEYNIH-HSKISRNEKCPCGSGK 854

Query: 299 NYKTAKSA 322
+K A
Sbjct: 855 KFKHCHGA 862


>sp|Q8HYY4|UACA_BOVIN Uveal autoantigen with coiled-coil domains and
ankyrin repeats protein OS=Bos taurus GN=UACA PE=1 SV=1
Length = 1401

Score = 30.4 bits (67), Expect = 6.5
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2

Query: 143 AASFAMLKNLYPLIWLHVQMKIIISDTQRLLYSWHTQQKSHNNERFTTTQ-KKNYKTAKS 319
AA + K PL + K + + L T+Q+ + E+ T TQ ++ + K+
Sbjct: 1087 AAQTLLQKQHVPLEQVESLKKSLSGTIETLKEELKTKQRCYEKEQQTVTQLRQMLENQKN 1146

Query: 320 AAVPLAEH 343
++VPLAEH
Sbjct: 1147 SSVPLAEH 1154


>sp|P21343|PFPB_SOLTU Pyrophosphate--fructose 6-phosphate
1-phosphotransferase subunit beta OS=Solanum tuberosum
PE=1 SV=2
Length = 552

Score = 30.4 bits (67), Expect = 6.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQG 511
PIQF GP A N TL+LE G
Sbjct: 529 PIQFVGPVANKVNHTLLLELG 549


tr_hit_id A9T8G2
Definition tr|A9T8G2|A9T8G2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 24
Score (bit) 39.3
E-value 0.16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK949090|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0005_A24, 5'
(573 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T8G2|A9T8G2_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.16
tr|A9T4E0|A9T4E0_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.16
tr|Q9ZST3|Q9ZST3_CITPA Pyrophosphate-dependent phosphofructokina... 39 0.27
tr|A9YVC9|A9YVC9_9ROSI Pyrophosphate-dependent phosphofructokina... 38 0.45
tr|A9SVF8|A9SVF8_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.77
tr|A7PX81|A7PX81_VITVI Chromosome chr12 scaffold_36, whole genom... 36 1.7
tr|B4FQM2|B4FQM2_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.9
tr|Q654U8|Q654U8_ORYSJ Os06g0247500 protein OS=Oryza sativa subs... 33 8.6
tr|A2YB91|A2YB91_ORYSI Putative uncharacterized protein OS=Oryza... 33 8.6
tr|Q23RB2|Q23RB2_TETTH Putative uncharacterized protein OS=Tetra... 33 8.6
tr|B6V7G4|B6V7G4_CARMA Cytochrome P450 CYP379A1 OS=Carcinus maen... 33 8.6

>tr|A9T8G2|A9T8G2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_107676 PE=4 SV=1
Length = 552

Score = 39.3 bits (90), Expect = 0.16
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQGCQV 502
PIQF GPTA++TNFTL LE G V
Sbjct: 527 PIQFAGPTADETNFTLKLELGASV 550


>tr|A9T4E0|A9T4E0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_218794 PE=4 SV=1
Length = 567

Score = 39.3 bits (90), Expect = 0.16
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQGCQV 502
PIQF GPT++DTNFTL LE G V
Sbjct: 542 PIQFAGPTSDDTNFTLKLELGAPV 565


>tr|Q9ZST3|Q9ZST3_CITPA Pyrophosphate-dependent phosphofructokinase
beta subunit OS=Citrus paradisi GN=PPi-PFKb PE=2 SV=1
Length = 566

Score = 38.5 bits (88), Expect = 0.27
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQGCQV 502
PIQFTGPT+ D N TL+LE G QV
Sbjct: 543 PIQFTGPTSGDVNHTLLLELGAQV 566


>tr|A9YVC9|A9YVC9_9ROSI Pyrophosphate-dependent phosphofructokinase
beta subunit OS=Citrus sinensis x Poncirus trifoliata
PE=2 SV=1
Length = 565

Score = 37.7 bits (86), Expect = 0.45
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQGCQV 502
PIQFTGPT+ D N TL+LE G QV
Sbjct: 542 PIQFTGPTSGDVNNTLLLELGAQV 565


>tr|A9SVF8|A9SVF8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_188815 PE=4 SV=1
Length = 565

Score = 37.0 bits (84), Expect = 0.77
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQG 511
PIQFTGPTA+DT +TL LE G
Sbjct: 543 PIQFTGPTADDTCYTLKLEAG 563


>tr|A7PX81|A7PX81_VITVI Chromosome chr12 scaffold_36, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025935001
PE=4 SV=1
Length = 563

Score = 35.8 bits (81), Expect = 1.7
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQGCQ 505
P+QF GPTA + N TLMLE G Q
Sbjct: 540 PVQFVGPTANEINHTLMLELGAQ 562


>tr|B4FQM2|B4FQM2_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 564

Score = 35.0 bits (79), Expect = 2.9
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQGCQV 502
PIQF+GP ++D+N TLMLE G ++
Sbjct: 541 PIQFSGPGSDDSNHTLMLELGAEL 564


>tr|Q654U8|Q654U8_ORYSJ Os06g0247500 protein OS=Oryza sativa subsp.
japonica GN=OJ1136_C11.21 PE=4 SV=1
Length = 567

Score = 33.5 bits (75), Expect = 8.6
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQGCQ 505
PIQF+GP + D N TLMLE G +
Sbjct: 544 PIQFSGPGSNDANHTLMLELGAE 566


>tr|A2YB91|A2YB91_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22368 PE=4 SV=1
Length = 567

Score = 33.5 bits (75), Expect = 8.6
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1

Query: 573 PIQFTGPTAEDTNFTLMLEQGCQ 505
PIQF+GP + D N TLMLE G +
Sbjct: 544 PIQFSGPGSNDANHTLMLELGAE 566


>tr|Q23RB2|Q23RB2_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00389760 PE=4
SV=1
Length = 871

Score = 33.5 bits (75), Expect = 8.6
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +2

Query: 233 LYSWHTQQKSHNNERFTTTQKKNYKTAKSAAVPLAEHKVQKCLLMKRSLTLQSGDTTCCP 412
LY TQ K N FT T ++ Y T VP+ + K K SLTL++ TT
Sbjct: 770 LYQNQTQSKKRGNSFFTKTNQEIYSTKTPHIVPIKKQKDAK--TKDHSLTLRNEPTTTVA 827

Query: 413 SFDRR 427
+R
Sbjct: 828 QQQKR 832