DK949024 |
Clone id |
TST38A01NGRL0004_O03 |
Library |
TST38 |
Length |
693 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_O03. 5' end sequence. |
Accession |
DK949024 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL261Contig1 |
Sequence |
AACAGAAGGAGGTCTATGAGCACGAGAAGGAGCAAGTTTTGCTAGCAGAAAATGTAGTCC TTCAAACTTTGGGTTTTGAGCTCAATGTCATCCATCCGTACAAGCGTTTGGTAGCAGCTG TTAAGAAGCTCAAAGTTACAGAGAAATCTTTGGCTCAAGTTGCTTGGAATTTCTTAAATG ATGCGTTGAGGACATCGCTATGCCTGCAGTATGAGGCTCATTATATTGCAGCTGGGGGCA TTTTCCTTGCAGCAAAGTTTCTGAAAATGAAGCTGCCAACCGACTGCGAAAAGCCCTGGT GGCAAGAGCTGGAGGTTACTGCCCGGCAATTAGAAGATGTGAGTAATCAGATGCTGGAAT TGTATGAGCATCACCGGGATTCAACTCCTAGTCCTAGCGGTATTACAGGAAGCGTGGTCC CCCCCCAGGCCCCTCCTGCCACACCCCAAGTGACAGTGAAAAGGAACACCAAGCTGAGAG AGAAGGAAGCCGACTGCGACTGCTCAAGTATACAGGGTAATGTCTCAAGTATACATGCGT CGAAATCCCCCTATATTTCCCCTGAGAAAGAGAACTTTGAGAAACCAGAGCTTAGTGACC TTGGAAGTCTAGATGTTGCAGAAGAGAGCAAGCGCATCCACCCACGCTGTGGCTCTCAAG ATTGTCACGAGCGGGAATCAAAGAGGCCTTGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2RAC5 |
Definition |
sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica |
Align length |
133 |
Score (bit) |
175.0 |
E-value |
2.0e-43 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BJ73 |
Definition |
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
133 |
Score (bit) |
175.0 |
E-value |
2.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949024|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_O03, 5' (693 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza... 175 2e-42 tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whol... 175 3e-42 tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequen... 173 1e-41 tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza... 173 1e-41 tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medic... 170 9e-41 tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 164 4e-39 tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza... 163 8e-39 tr|A5B2H4|A5B2H4_VITVI Putative uncharacterized protein OS=Vitis... 155 2e-36 tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medic... 150 6e-35 tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomit... 148 4e-34 tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whol... 136 1e-30 tr|A9SUA9|A9SUA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 135 3e-30 tr|A7NT76|A7NT76_VITVI Chromosome chr18 scaffold_1, whole genome... 122 3e-26 tr|A5C1E2|A5C1E2_VITVI Putative uncharacterized protein OS=Vitis... 122 3e-26 tr|B8AH65|B8AH65_ORYSI Putative uncharacterized protein OS=Oryza... 114 8e-24 tr|B7F0D1|B7F0D1_ORYSJ cDNA clone:002-129-H05, full insert seque... 114 8e-24 tr|B6SH69|B6SH69_MAIZE Cyclin-dependent protein kinase OS=Zea ma... 114 8e-24 tr|B8AH26|B8AH26_ORYSI Putative uncharacterized protein OS=Oryza... 109 1e-22 tr|A3A6C4|A3A6C4_ORYSJ Putative uncharacterized protein OS=Oryza... 109 2e-22 tr|A4RSP3|A4RSP3_OSTLU CycK-related cyclin family protein OS=Ost... 105 3e-21 tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc... 103 8e-21 tr|Q01EB0|Q01EB0_OSTTA CycK CycK-related cyclin family protein (... 101 4e-20 tr|Q6EEW1|Q6EEW1_MEDTR Cyclin T1 OS=Medicago truncatula PE=2 SV=1 91 7e-17 tr|A8I762|A8I762_CHLRE L-type cyclin (Fragment) OS=Chlamydomonas... 89 3e-16 tr|B6UF70|B6UF70_MAIZE Putative uncharacterized protein OS=Zea m... 87 1e-15 tr|B7ETJ6|B7ETJ6_ORYSJ cDNA clone:J033105N11, full insert sequen... 85 5e-15 tr|Q566H0|Q566H0_XENLA MGC115029 protein OS=Xenopus laevis GN=cc... 82 3e-14 tr|Q0V9U3|Q0V9U3_XENTR Cyclin K OS=Xenopus tropicalis GN=ccnk PE... 82 3e-14 tr|A9PFH1|A9PFH1_POPTR Putative uncharacterized protein OS=Popul... 82 3e-14 tr|B6SVQ2|B6SVQ2_MAIZE Putative uncharacterized protein OS=Zea m... 82 4e-14
>tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35185 PE=4 SV=1 Length = 490
Score = 175 bits (444), Expect = 2e-42 Identities = 86/133 (64%), Positives = 101/133 (75%) Frame = +3
Query: 3 QKEVYEHEKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLND 182 QKEVYE +KE +LL E VVL TLGF+LNV HPYK + +LAQVAWNF+ND Sbjct: 151 QKEVYEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVND 210
Query: 183 ALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLEL 362 LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLEL Sbjct: 211 GLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLEL 270
Query: 363 YEHHRDSTPSPSG 401 YE +R + P G Sbjct: 271 YEQNRVAPPPSQG 283
>tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035737001 PE=3 SV=1 Length = 523
Score = 175 bits (443), Expect = 3e-42 Identities = 87/137 (63%), Positives = 102/137 (74%) Frame = +3
Query: 3 QKEVYEHEKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLND 182 QKEVYE +KE +LL E VVL TLGF+LNV HPYK + +LAQVAWNF+ND Sbjct: 147 QKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVND 206
Query: 183 ALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLEL 362 LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLEL Sbjct: 207 GLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLEL 266
Query: 363 YEHHRDSTPSPSGITGS 413 YE +R S + GS Sbjct: 267 YEQNRVPPSQGSEVEGS 283
>tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 543
Score = 173 bits (438), Expect = 1e-41 Identities = 85/132 (64%), Positives = 101/132 (76%) Frame = +3
Query: 3 QKEVYEHEKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLND 182 QKEVY+ +KE +LLAE VVL TLGF+LNV HPYK + +LAQVAWNF+ND Sbjct: 150 QKEVYDQQKELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQNALAQVAWNFVND 209
Query: 183 ALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLEL 362 LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLEL Sbjct: 210 GLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLEL 269
Query: 363 YEHHRDSTPSPS 398 YE + + PS Sbjct: 270 YEQNCAAQAQPS 281
>tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034708 PE=3 SV=1 Length = 683
Score = 173 bits (438), Expect = 1e-41 Identities = 85/132 (64%), Positives = 101/132 (76%) Frame = +3
Query: 3 QKEVYEHEKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLND 182 QKEVY+ +KE +LLAE VVL TLGF+LNV HPYK + +LAQVAWNF+ND Sbjct: 178 QKEVYDQQKELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQNALAQVAWNFVND 237
Query: 183 ALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLEL 362 LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLEL Sbjct: 238 GLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLEL 297
Query: 363 YEHHRDSTPSPS 398 YE + + PS Sbjct: 298 YEQNCAAQAQPS 309
>tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 395
Score = 170 bits (430), Expect = 9e-41 Identities = 83/125 (66%), Positives = 97/125 (77%) Frame = +3
Query: 3 QKEVYEHEKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLND 182 QKEVYE +KE +LL E VVL TL F+LNV HPYK + +LAQVAWNF+ND Sbjct: 148 QKEVYEQQKELILLGERVVLATLAFDLNVQHPYKPLVEAIKKFNVAKNALAQVAWNFVND 207
Query: 183 ALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLEL 362 LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLEL Sbjct: 208 GLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLEL 267
Query: 363 YEHHR 377 YE +R Sbjct: 268 YEQNR 272
>tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42949 PE=3 SV=1 Length = 406
Score = 164 bits (416), Expect = 4e-39 Identities = 80/132 (60%), Positives = 99/132 (75%) Frame = +3
Query: 3 QKEVYEHEKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLND 182 QK+VYE +KE VL E ++L TLGF+LNV HPYK + +LAQVAWNF+ND Sbjct: 117 QKDVYEDQKELVLGGERLLLTTLGFDLNVHHPYKPLVAAIKKFKVAQNTLAQVAWNFVND 176
Query: 183 ALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLEL 362 LRTSLCLQ++ H+IAAG IFLAAKFLK+ LP D +K WWQ+ EVT RQLE+VSNQMLEL Sbjct: 177 GLRTSLCLQFKPHHIAAGAIFLAAKFLKVNLPKDGDKVWWQQFEVTPRQLEEVSNQMLEL 236
Query: 363 YEHHRDSTPSPS 398 YE ++ + P+ S Sbjct: 237 YEQNKSNGPTGS 248
>tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031709 PE=3 SV=1 Length = 495
Score = 163 bits (413), Expect = 8e-39 Identities = 80/126 (63%), Positives = 95/126 (75%) Frame = +3
Query: 24 EKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLC 203 +KE +LL E VVL TLGF+LNV HPYK + +LAQVAWNF+ND LRTSLC Sbjct: 163 QKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLC 222
Query: 204 LQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDS 383 LQ++ H+IAAG IFLAAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLELYE +R + Sbjct: 223 LQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVA 282
Query: 384 TPSPSG 401 P G Sbjct: 283 PPPSQG 288
>tr|A5B2H4|A5B2H4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039383 PE=4 SV=1 Length = 481
Score = 155 bits (393), Expect = 2e-36 Identities = 81/140 (57%), Positives = 97/140 (69%), Gaps = 9/140 (6%) Frame = +3
Query: 9 EVYEHEKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAW------- 167 EVYE +KE +L+ E VVL TLGF+LNV HPYK + +LAQVAW Sbjct: 44 EVYEQQKELILIGERVVLATLGFDLNVHHPYKPLVEAMKKFKAAQDALAQVAWNFALAQV 103
Query: 168 --NFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDV 341 NF+ND LRTSLCLQ++ +IAAG IFLAAKFLK+KLP+D E WWQE +VT RQLE++ Sbjct: 104 AWNFVNDGLRTSLCLQFKPDHIAAGAIFLAAKFLKVKLPSDGEVVWWQEFDVTPRQLEEI 163
Query: 342 SNQMLELYEHHRDSTPSPSG 401 SNQMLELYE +R P P G Sbjct: 164 SNQMLELYEQNR--VPPPQG 181
>tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 150 bits (380), Expect = 6e-35 Identities = 73/111 (65%), Positives = 85/111 (76%) Frame = +3
Query: 3 QKEVYEHEKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLND 182 QKEVYE +KE +LLAE VVL TLGF+ NV HPYK + +LAQVAWNF+ND Sbjct: 147 QKEVYEQQKELILLAERVVLATLGFDFNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVND 206
Query: 183 ALRTSLCLQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLE 335 LRTSLCLQ++ H+IAAG IFLAAKFLK+KLP+D EK WWQE +VT RQLE Sbjct: 207 GLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLE 257
>tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_17473 PE=3 SV=1 Length = 230
Score = 148 bits (373), Expect = 4e-34 Identities = 71/117 (60%), Positives = 88/117 (75%) Frame = +3
Query: 24 EKEQVLLAENVVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLC 203 +++ VL E +VL TLGF+LN+ HPYK + +LAQVAWNF+ND LRTSLC Sbjct: 114 KQKLVLAGERLVLTTLGFDLNIHHPYKPLVAAIKRFKVAQNTLAQVAWNFVNDGLRTSLC 173
Query: 204 LQYEAHYIAAGGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHH 374 LQ++ H+IAAG IFLAAKFLK+ LP + +K WWQE EVT RQLE+VSNQMLELYE + Sbjct: 174 LQFKPHHIAAGAIFLAAKFLKVNLPKEGDKVWWQEFEVTPRQLEEVSNQMLELYEQN 230
|