BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948830|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_F18, 5'
         (631 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6DJI9|ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding moti...    31   6.1  
sp|P27502|POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform vi...    31   6.1  
sp|Q568K2|PP1RB_DANRE Protein phosphatase 1 regulatory subunit 1...    30   7.8  
sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot...    30   7.9  
sp|Q7TD09|CAPSD_CYLCV Capsid protein OS=Cestrum yellow leaf curl...    30   7.9  

>sp|Q6DJI9|ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding
           motif-containing protein 1 OS=Xenopus laevis GN=zcrb1
           PE=2 SV=1
          Length = 218

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
 Frame = +1

Query: 97  KCYTCRETNHIAAKC---LIKEESPVDKVETAK---AVEERQEE 210
           +CY C +T H++  C   ++ E  P  K E  K    VEE +EE
Sbjct: 106 RCYECGDTGHLSYACPKNMLGEREPPQKKEKKKRKRLVEEEEEE 149


>sp|P27502|POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform virus
           (isolate Philippines) PE=1 SV=1
          Length = 1675

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 19  RKCRKKVKKFLV*HQKR--RQSGISKW*KCYTCRETNHIAAKC 141
           RK  K+V  +    +K   R+  I K  +CY C++ NH+A +C
Sbjct: 745 RKILKRVTNYNKNRRKNYVRRPSIKKKCRCYICQDENHLANRC 787


>sp|Q568K2|PP1RB_DANRE Protein phosphatase 1 regulatory subunit 11
           OS=Danio rerio GN=ppp1r11 PE=1 SV=1
          Length = 122

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 16/68 (23%)
 Frame = +3

Query: 60  SEEKAEWDQ*VVKVLHL*RDQSYCSEVLDK----GRKSSGQGGDSE------------GS 191
           +E+K EW    V   HL R  S C  + +K    G  SS   GD E            G 
Sbjct: 40  TEKKVEWSSDTVDNEHLGRRSSKCCCIYEKPRQFGESSSESEGDDEEGCGSAHCILGHGR 99

Query: 192 RGETRREG 215
           RG  +REG
Sbjct: 100 RGHGQREG 107


>sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mottle
            virus PE=4 SV=2
          Length = 1886

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 21/78 (26%), Positives = 37/78 (47%)
 Frame = +1

Query: 97   KCYTCRETNHIAAKCLIKEESPVDKVETAKAVEERQEEKG*TKGGLISDFKGIPQDKEDE 276
            KCY C +  H A +C  K +    +V   ++++ ++ E+      ++S       DKE+E
Sbjct: 880  KCYICGQEGHYANQCRNKHKDQ-QRVAILQSLDLKENEE------VVS-----ADDKEEE 927

Query: 277  STELFQA*GKVRDQEALI 330
              E+F   G+   QE  I
Sbjct: 928  DDEIFSVLGEEDYQEETI 945


>sp|Q7TD09|CAPSD_CYLCV Capsid protein OS=Cestrum yellow leaf curling
           virus GN=ORF IV PE=3 SV=1
          Length = 501

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +1

Query: 97  KCYTCRETNHIAAKCLIK-EESPVDKVETAKAVEERQEEKG*TKGGLISD-FKGIPQDKE 270
           KC+ C E  H A +C  K +E   DKV+     EE   E   ++   I + F+ + +D E
Sbjct: 432 KCWICHEEGHYANECPKKTKEKHKDKVKLLMEAEEEGFEPLESEASDIEEIFEIVEEDSE 491

Query: 271 DESTE 285
             S E
Sbjct: 492 SSSEE 496

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK948830|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0004_F18, 5'
         (631 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7I747|A7I747_METB6 Putative uncharacterized protein OS=Metha...    35   4.9  

>tr|A7I747|A7I747_METB6 Putative uncharacterized protein
           OS=Methanoregula boonei (strain 6A8) GN=Mboo_1040 PE=4
           SV=1
          Length = 418

 Score = 34.7 bits (78), Expect = 4.9
 Identities = 23/61 (37%), Positives = 29/61 (47%)
 Frame = -2

Query: 564 CLFPYQLDTTLEPQHKRGFYMPSS*HRLLLRFLPCKPQMYILYKGARPRPQTHTLLSLMK 385
           C FP  L   L P+    FY PS   ++LL  +      YIL++G R      TLL L K
Sbjct: 271 CFFPLHLTEYLNPKQYNEFYWPSL-KKVLLEVINMGQTPYILFEG-RHDAHLETLLDLPK 328

Query: 384 G 382
           G
Sbjct: 329 G 329