DK948820 |
Clone id |
TST38A01NGRL0004_F08 |
Library |
TST38 |
Length |
661 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0004_F08. 5' end sequence. |
Accession |
DK948820 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CGTTCTCCGTCGTCACCACTTTCGTTACAGAGCGGAGCTTGGAAGTCTTCTCAATGCAAG CAGGTCTCAAGGCGAACGCCACTTCCTTCTCTTCGGATTGTTGCTCAGAAATCTCCCGAC TTATACAAAGCATTTGCGGTTGCGGTTAAAACTGCCAGAGATGCATTAGATGCAGGAACA AAGCTGGTACCTGAGTCGGTGCCAAGGCCTGTGGCGCAAGCAGGTGTAGCAATCCTTGGC ATTGTGGGGTCCTTGTATCTGCTGCAGTCCTTGTTCTCAATTGCTTTGTTTATATTGGCT ATTGGTGGTGTTGGCTACTATCTCTTCTATTCTTTGAACAAAGATGATGATGACCGTGGA GGTGGGAATTCCTCCAATGGCAGCGATCCAGATTTGACACTGGAGGAGGCCAGGAGAATA ATGGAAAAATACAAGTAAAAGCTGACATTTTTTATCACTGCCTTTTTGTTTGACACGGAT TTGAGGTGTTTCTTTTATATACATTGCTCTCATATTGTTTTGGAGGTTTTTTTATCAATG ACTAGAGTCTGCGTTATGTTGCAGCAGCAAAGTACAAAATGAAGAAAGCAAGACAAAAAC TGTTGTAACAATACCTTGTATAGCTACTCAGGGTTAGCGTCAAAAAAAAAAAAAAAAAAA A |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SBU6 |
Definition |
sp|Q7SBU6|VID21_NEUCR Chromatin modification-related protein vid-21 OS=Neurospora crassa |
Align length |
53 |
Score (bit) |
32.3 |
E-value |
2.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2QU14 |
Definition |
tr|Q2QU14|Q2QU14_ORYSJ Os12g0276100 protein OS=Oryza sativa subsp. japonica |
Align length |
144 |
Score (bit) |
77.0 |
E-value |
9.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK948820|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0004_F08, 5' (641 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2QU14|Q2QU14_ORYSJ Os12g0276100 protein OS=Oryza sativa subs... 77 9e-13 tr|B8AZN5|B8AZN5_ORYSI Putative uncharacterized protein OS=Oryza... 77 9e-13 tr|B6TR67|B6TR67_MAIZE Putative uncharacterized protein OS=Zea m... 76 2e-12 tr|Q6NLB6|Q6NLB6_ARATH At4g13220 OS=Arabidopsis thaliana GN=At4g... 72 3e-11 tr|A9TEN6|A9TEN6_PHYPA Predicted protein OS=Physcomitrella paten... 71 5e-11 tr|A3CAK1|A3CAK1_ORYSJ Putative uncharacterized protein OS=Oryza... 71 5e-11 tr|A5C4R1|A5C4R1_VITVI Putative uncharacterized protein OS=Vitis... 69 2e-10 tr|A9PJH6|A9PJH6_POPJC Putative uncharacterized protein OS=Popul... 68 5e-10 tr|Q9SVQ5|Q9SVQ5_ARATH Putative uncharacterized protein F17N18.1... 67 9e-10 tr|A9TW39|A9TW39_PHYPA Predicted protein OS=Physcomitrella paten... 64 8e-09 tr|A7QKS3|A7QKS3_VITVI Chromosome undetermined scaffold_114, who... 63 2e-08 tr|A8ISE2|A8ISE2_CHLRE SNF2 superfamily protein OS=Chlamydomonas... 51 5e-05 tr|B5GMU0|B5GMU0_STRCL Putative uncharacterized protein OS=Strep... 36 2.3 tr|B4JPF8|B4JPF8_DROGR GH13412 OS=Drosophila grimshawi GN=GH1341... 36 2.3 tr|Q04YA0|Q04YA0_LEPBL Putative uncharacterized protein OS=Lepto... 35 3.0 tr|Q04V76|Q04V76_LEPBJ Putative uncharacterized protein OS=Lepto... 35 3.0 tr|B8DNI8|B8DNI8_DESVM NADH dehydrogenase (Quinone) OS=Desulfovi... 35 5.1 tr|A7VWK6|A7VWK6_9CLOT Putative uncharacterized protein OS=Clost... 35 5.1 tr|A4RP32|A4RP32_MAGGR Predicted protein OS=Magnaporthe grisea G... 34 6.6 tr|Q5TX14|Q5TX14_ANOGA AGAP007573-PA OS=Anopheles gambiae GN=AGA... 34 8.7
>tr|Q2QU14|Q2QU14_ORYSJ Os12g0276100 protein OS=Oryza sativa subsp. japonica GN=Os12g0276100 PE=2 SV=1 Length = 163
Score = 77.0 bits (188), Expect = 9e-13 Identities = 51/144 (35%), Positives = 76/144 (52%) Frame = +1
Query: 4 SPSSPLSLQSGAWKSSQCKQVSRRTPLPSLRIVAQKSPDLYKAFAVAVKTARDALDAGTK 183 +PSSP ++ + + +RR L + +V + + A K RDA++AGT Sbjct: 27 TPSSPFAVAA----PRRVMAPTRRPRLGTRLVVVSAQSNFSRVVQTAWKVGRDAVEAGTT 82
Query: 184 LVPESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGGVGYYLFYSLXXXXXXXXX 363 LVP SVPRPVA+ GV + + +L+LL+S+ S A F+LA+ G+ Y F ++ Sbjct: 83 LVPGSVPRPVARIGVTFVALSIALFLLKSVVSTAFFVLAMMGLIYLGFLAMNPKEGSRVD 142
Query: 364 XXXXXXXXXXLTLEEARRIMEKYK 435 +EEARRIMEKYK Sbjct: 143 EGANSSED---PVEEARRIMEKYK 163
>tr|B8AZN5|B8AZN5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19050 PE=4 SV=1 Length = 159
Score = 77.0 bits (188), Expect = 9e-13 Identities = 51/144 (35%), Positives = 76/144 (52%) Frame = +1
Query: 4 SPSSPLSLQSGAWKSSQCKQVSRRTPLPSLRIVAQKSPDLYKAFAVAVKTARDALDAGTK 183 +PSSP ++ + + +RR L + +V + + A K RDA++AGT Sbjct: 23 TPSSPFAVAA----PRRVMAPTRRPRLGTRLVVVSAQSNFSRVVQTAWKVGRDAVEAGTT 78
Query: 184 LVPESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGGVGYYLFYSLXXXXXXXXX 363 LVP SVPRPVA+ GV + + +L+LL+S+ S A F+LA+ G+ Y F ++ Sbjct: 79 LVPGSVPRPVARIGVTFVALSIALFLLKSVVSTAFFVLAMMGLIYLGFLAMNPKEGSRVD 138
Query: 364 XXXXXXXXXXLTLEEARRIMEKYK 435 +EEARRIMEKYK Sbjct: 139 EGANSSED---PVEEARRIMEKYK 159
>tr|B6TR67|B6TR67_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 164
Score = 75.9 bits (185), Expect = 2e-12 Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 6/128 (4%) Frame = +1
Query: 70 RRTPLPS------LRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPESVPRPVAQAGVA 231 RR P PS VA D +A A + DA++AG+ LVP SVPRP+A+ GVA Sbjct: 37 RRAPPPSPFPPKPRLFVASAQLDFSRAVQTAWRVGNDAVEAGSNLVPGSVPRPIARIGVA 96
Query: 232 ILGIVGSLYLLQSLFSIALFILAIGGVGYYLFYSLXXXXXXXXXXXXXXXXXXXLTLEEA 411 + + +L++S+ S LF+LA+ G+ Y F ++ +EEA Sbjct: 97 FAAVSVAFFLVKSIVSTTLFVLAMMGLIYLSFLAMNPKEASGSRLDEAMGNPSEDPVEEA 156
Query: 412 RRIMEKYK 435 RRIMEKYK Sbjct: 157 RRIMEKYK 164
>tr|Q6NLB6|Q6NLB6_ARATH At4g13220 OS=Arabidopsis thaliana GN=At4g13220 PE=2 SV=1 Length = 176
Score = 72.0 bits (175), Expect = 3e-11 Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 10/153 (6%) Frame = +1
Query: 7 PSSPLSLQSGAWKSSQCKQVSRRTPLPSLR--------IVAQKSPDLYKAFAVAVKTARD 162 P+SP K ++ RT + L+ +V K A +D Sbjct: 24 PNSPFLSPCSVLKLKNASLLNLRTRIAPLQPQRLRSKTLVLSAQSSFLKVLRTAWNIGKD 83
Query: 163 ALDAGTKLVPESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGGVGYYLFYSLXX 342 ++AGT LVP SVPRPVA+ V I + SL++++S S A F+L G Y+LF +L Sbjct: 84 GIEAGTNLVPVSVPRPVARISVTIAALAVSLFVVKSFLSTAFFVLGTMGFAYFLFIALNK 143
Query: 343 XXXXXXXXXXXXXXXXXL--TLEEARRIMEKYK 435 + LEEA++IM+KYK Sbjct: 144 DEAPKLRGDDNSSGSKSMDDPLEEAKKIMDKYK 176
>tr|A9TEN6|A9TEN6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169641 PE=4 SV=1 Length = 231
Score = 71.2 bits (173), Expect = 5e-11 Identities = 53/144 (36%), Positives = 68/144 (47%), Gaps = 29/144 (20%) Frame = +1
Query: 91 LRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPESVPRPVAQAGVAILGIVGSLYLLQS 270 L++VA++ D+ KA VKT ++ALDAGT LVPES+PR VA+ V ++G Y L++ Sbjct: 88 LKVVAEEKFDVAKAAGFLVKTGKNALDAGTNLVPESIPRGVARIIVGLVGASVVTYALRA 147
Query: 271 LFSIALFIL----------------------------AIGGVGYYLF-YSLXXXXXXXXX 363 LFS ALFIL AI G Y + Y Sbjct: 148 LFSTALFILVRSGSLRKAIYDDCLSLRNWKRELIVSQAIAGFSYLAYMYLNKDSDSGSGG 207
Query: 364 XXXXXXXXXXLTLEEARRIMEKYK 435 +LEEARRIMEKYK Sbjct: 208 GGGGKPRNTDDSLEEARRIMEKYK 231
>tr|A3CAK1|A3CAK1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032323 PE=4 SV=1 Length = 144
Score = 71.2 bits (173), Expect = 5e-11 Identities = 43/98 (43%), Positives = 58/98 (59%) Frame = +1
Query: 142 AVKTARDALDAGTKLVPESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFILAIGGVGYY 321 A K RDA++AGT LVP SVPRPVA+ GV + + +L+LL+S+ S A F+LA+ G+ Y Sbjct: 50 AWKVGRDAVEAGTTLVPGSVPRPVARIGVTFVALSIALFLLKSVVSTAFFVLAMMGLIYL 109
Query: 322 LFYSLXXXXXXXXXXXXXXXXXXXLTLEEARRIMEKYK 435 F ++ +EEARRIMEKYK Sbjct: 110 GFLAMNPKEGSRVDEGANSSED---PVEEARRIMEKYK 144
>tr|A5C4R1|A5C4R1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008677 PE=4 SV=1 Length = 221
Score = 69.3 bits (168), Expect = 2e-10 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 3/114 (2%) Frame = +1
Query: 97 IVAQKSPDLYKAFAVAVKTARDALDAGTKLVPESVPRPVAQAGVAILGIVGSLYLLQSLF 276 +V + + K +D ++AGT LVPESVPRP+A+ V ++ + +L++ +S Sbjct: 59 VVCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISVTVVTLAVALFVFKSFL 118
Query: 277 SIALFILAIGGVGYYLFYSLXXXXXXXXXXXXXXXXXXXLT---LEEARRIMEK 429 S A F+LA+ G+ Y+ F +L T LEEARRIMEK Sbjct: 119 STAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGVDGGTPSTEDSLEEARRIMEK 172
>tr|A9PJH6|A9PJH6_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 172
Score = 67.8 bits (164), Expect = 5e-10 Identities = 42/126 (33%), Positives = 58/126 (46%) Frame = +1
Query: 58 KQVSRRTPLPSLRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPESVPRPVAQAGVAIL 237 K + P + +V + K K +D ++ GT LVP SVPRP+A+ V + Sbjct: 51 KNPRTKNPRSAPVVVFAAQSNFLKVVQTVWKVGKDGIETGTNLVPNSVPRPIARVAVTFV 110
Query: 238 GIVGSLYLLQSLFSIALFILAIGGVGYYLFYSLXXXXXXXXXXXXXXXXXXXLTLEEARR 417 + SL+LL+S S F LA G+ Y+ F +L EEARR Sbjct: 111 VLAVSLFLLKSFLSTVFFALATMGLVYFTFIALNKDQGPKGGGGTTLEDPE----EEARR 166
Query: 418 IMEKYK 435 IMEKYK Sbjct: 167 IMEKYK 172
>tr|Q9SVQ5|Q9SVQ5_ARATH Putative uncharacterized protein F17N18.110 OS=Arabidopsis thaliana GN=F17N18.110 PE=2 SV=1 Length = 180
Score = 67.0 bits (162), Expect = 9e-10 Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 14/157 (8%) Frame = +1
Query: 7 PSSPLSLQSGAWKSSQCKQVSRRTPLPSLR--------IVAQKSPDLYKAFAVAVKTARD 162 P+SP K ++ RT + L+ +V K A +D Sbjct: 24 PNSPFLSPCSVLKLKNASLLNLRTRIAPLQPQRLRSKTLVLSAQSSFLKVLRTAWNIGKD 83
Query: 163 ALDAGTKLVPESVPRPVAQAGVAILGIVGSLYLLQSLFSIALFIL--AIG--GVGYYLFY 330 ++AGT LVP SVPRPVA+ V I + SL++++S S A F+L +G G Y+LF Sbjct: 84 GIEAGTNLVPVSVPRPVARISVTIAALAVSLFVVKSFLSTAFFVLVCCVGTMGFAYFLFI 143
Query: 331 SLXXXXXXXXXXXXXXXXXXXL--TLEEARRIMEKYK 435 +L + LEEA++IM+KYK Sbjct: 144 ALNKDEAPKLRGDDNSSGSKSMDDPLEEAKKIMDKYK 180
>tr|A9TW39|A9TW39_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_98062 PE=4 SV=1 Length = 283
Score = 63.9 bits (154), Expect = 8e-09 Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 6/94 (6%) Frame = +1
Query: 55 CKQVSRRTPLPS------LRIVAQKSPDLYKAFAVAVKTARDALDAGTKLVPESVPRPVA 216 C +R LPS L+IVA+K +A V+ + A DA T L+PESVPR VA Sbjct: 70 CVTEARGAALPSCAGRQELKIVAEKKSHAGEAAGFLVEAGKTAWDASTNLIPESVPRGVA 129
Query: 217 QAGVAILGIVGSLYLLQSLFSIALFILAIGGVGY 318 + V ++G+ ++ L++ FS ALFI+ I G Y Sbjct: 130 RITVGVVGVSLIIHALRAFFSTALFIMGIAGFSY 163
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